| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632937
Identifier: 110632937
GI number: 110632937
Start: 639158
End: 640519
Strand: Direct
Name: 110632937
Synonym: Meso_0579
Alternate gene names: NA
Gene position: 639158-640519 (Clockwise)
Preceding gene: 110632935
Following gene: 110632942
Centisome position: 14.49
GC content: 64.54
Gene sequence:
>1362_bases ATGCCCGGAAATCGCCTTGCCGCAGGTCTTGCGGCCGCATTGATGAGCAGCATCTTGAGCTTCCCGGCGATGGCTGATCC GGCCGAACTCGTCGGCCGCATATCCGGATCGACGATCGCTGTGATTTCCGACGGCGACTTCGTCGGCCAGACCTACGCGA CCGGACGTCTTGCGCCGCGCGAGGCGGGTCATCGCGATCTTCTCACCATCCTGTCCATCGCTGATGGTCGTCTTGTCTCG GGTAGCCTTCCGCTGTCGAACTCGGTGACCGCCGCGCCGGAGGTTCTAGCGCTCACGCGCGATGGCCGGACGGCCTTTGT AACCGAGCGCCTGGGCGAACGCCTGGAGGGAGGGGATACGGTGGCCGATCTGCCGCCCGGCAACAGGCTGTTCGCGGCAG ACCTTACAGACGAGGCAAAACCGCGGCTCGCCGATACGGCGGAACTGGCCGCTTTTCCGGAGGCTCTTGCGATCGGTCCA GATGGCCGACTGGTCGCCGTGGTGTCCAACACGGCGGAAGCGAGCTTTCTGCAGATCGTGCCCTACGACGGCGGCAGGTT CGGCGAGGTGACGCGGATCGATCTGGATGAACTCGGCGTGCGGGGCTCGGCTGGCGGACCGCGAGGCGGCGTGACGGCGA CCAACGTGCAGTGGCACCCCTCCGGACGCTTCCTTGCCGTCAATATCAACACGCAGAACCGCGTCGCCTTCTTCGAGCTG ACGGATGAGGACGGAAGACCGGGCCTGCGCCCGTGGGGCAATATAGTCGAGACAGGAGCAGACCCCTTCGTCGGGCGGTT CACACCGGACGGCGGCTTCTATCTCACCTCCGACTGGGGTAGGAACTTCACCGCCACCGACCTGGCCGGCCGCATCCCGG ACAGGCCGTCGGCGATCAGTGTTATCCGCCTGGCCGATCGCACTCGCCGAGGCGACGACGCACGTCACGAGCGGATCGCC AGCGTCGAAACGGATGTCGCCGCCGAAGGATTGGCCGTCAGTCCTGACGGCAGGTTTGTCGCAACGGTGAACATGCGCGG CACCGCTTTTCCCACCGATACCGATCGTTTCCAGCCGGAGGGAACAGTCACCTTGCTCGCTTTCGACAGCTCAGCCGGCG CCCTGACAAAGATCGGTGACTATCCGTTCGAGGGCGTTCTTCCTGAAGGCGGCACGTTTGATCTCACGGGCGATCACTTC CTGGCCACGGTATTTCATGGGCATGACGGCGCGGATGACAGCGTAGGCTCGGGCCTCGAAGTGTTCCACGTCATCAAAGG CGATAATCCTGCCCTGGAACGTCTCGGCCGCATTCCGTTGCCGCACGGTGTTCACCACGTCGACATCGCCGGCGGGCAAT AG
Upstream 100 bases:
>100_bases GCCTTATCACAGGGCGGGGTATTCGAATTGGATACTAATCAGTACCCGTGGCATCGTCCACTCAATCTGACGAAGCCTCG TCGAACAGAAGGAGCGTTCT
Downstream 100 bases:
>100_bases CAGACGCTTGAAGGCGGCTCACTCGGATGATGGTGTCATCTTCTGCTGTCATCTGGCGCCGTCATGTCTGTCCGAGGAAA TGCTCGGGAAGGATGGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MPGNRLAAGLAAALMSSILSFPAMADPAELVGRISGSTIAVISDGDFVGQTYATGRLAPREAGHRDLLTILSIADGRLVS GSLPLSNSVTAAPEVLALTRDGRTAFVTERLGERLEGGDTVADLPPGNRLFAADLTDEAKPRLADTAELAAFPEALAIGP DGRLVAVVSNTAEASFLQIVPYDGGRFGEVTRIDLDELGVRGSAGGPRGGVTATNVQWHPSGRFLAVNINTQNRVAFFEL TDEDGRPGLRPWGNIVETGADPFVGRFTPDGGFYLTSDWGRNFTATDLAGRIPDRPSAISVIRLADRTRRGDDARHERIA SVETDVAAEGLAVSPDGRFVATVNMRGTAFPTDTDRFQPEGTVTLLAFDSSAGALTKIGDYPFEGVLPEGGTFDLTGDHF LATVFHGHDGADDSVGSGLEVFHVIKGDNPALERLGRIPLPHGVHHVDIAGGQ
Sequences:
>Translated_453_residues MPGNRLAAGLAAALMSSILSFPAMADPAELVGRISGSTIAVISDGDFVGQTYATGRLAPREAGHRDLLTILSIADGRLVS GSLPLSNSVTAAPEVLALTRDGRTAFVTERLGERLEGGDTVADLPPGNRLFAADLTDEAKPRLADTAELAAFPEALAIGP DGRLVAVVSNTAEASFLQIVPYDGGRFGEVTRIDLDELGVRGSAGGPRGGVTATNVQWHPSGRFLAVNINTQNRVAFFEL TDEDGRPGLRPWGNIVETGADPFVGRFTPDGGFYLTSDWGRNFTATDLAGRIPDRPSAISVIRLADRTRRGDDARHERIA SVETDVAAEGLAVSPDGRFVATVNMRGTAFPTDTDRFQPEGTVTLLAFDSSAGALTKIGDYPFEGVLPEGGTFDLTGDHF LATVFHGHDGADDSVGSGLEVFHVIKGDNPALERLGRIPLPHGVHHVDIAGGQ >Mature_452_residues PGNRLAAGLAAALMSSILSFPAMADPAELVGRISGSTIAVISDGDFVGQTYATGRLAPREAGHRDLLTILSIADGRLVSG SLPLSNSVTAAPEVLALTRDGRTAFVTERLGERLEGGDTVADLPPGNRLFAADLTDEAKPRLADTAELAAFPEALAIGPD GRLVAVVSNTAEASFLQIVPYDGGRFGEVTRIDLDELGVRGSAGGPRGGVTATNVQWHPSGRFLAVNINTQNRVAFFELT DEDGRPGLRPWGNIVETGADPFVGRFTPDGGFYLTSDWGRNFTATDLAGRIPDRPSAISVIRLADRTRRGDDARHERIAS VETDVAAEGLAVSPDGRFVATVNMRGTAFPTDTDRFQPEGTVTLLAFDSSAGALTKIGDYPFEGVLPEGGTFDLTGDHFL ATVFHGHDGADDSVGSGLEVFHVIKGDNPALERLGRIPLPHGVHHVDIAGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47595; Mature: 47463
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGNRLAAGLAAALMSSILSFPAMADPAELVGRISGSTIAVISDGDFVGQTYATGRLAPR CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCC EAGHRDLLTILSIADGRLVSGSLPLSNSVTAAPEVLALTRDGRTAFVTERLGERLEGGDT CCCCHHHEEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCE VADLPPGNRLFAADLTDEAKPRLADTAELAAFPEALAIGPDGRLVAVVSNTAEASFLQIV EEECCCCCEEEEECCCCCCCCCCCCHHHHHHCCHHEEECCCCCEEEEEECCCCCEEEEEE PYDGGRFGEVTRIDLDELGVRGSAGGPRGGVTATNVQWHPSGRFLAVNINTQNRVAFFEL ECCCCCCCCEEEEEHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEE TDEDGRPGLRPWGNIVETGADPFVGRFTPDGGFYLTSDWGRNFTATDLAGRIPDRPSAIS ECCCCCCCCCCCCHHHHCCCCCCEEEECCCCCEEEECCCCCCEEHHHHCCCCCCCCCCEE VIRLADRTRRGDDARHERIASVETDVAAEGLAVSPDGRFVATVNMRGTAFPTDTDRFQPE EEEEHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCC GTVTLLAFDSSAGALTKIGDYPFEGVLPEGGTFDLTGDHFLATVFHGHDGADDSVGSGLE CCEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCEE VFHVIKGDNPALERLGRIPLPHGVHHVDIAGGQ EEEEEECCCHHHHHHCCCCCCCCCEEEEECCCC >Mature Secondary Structure PGNRLAAGLAAALMSSILSFPAMADPAELVGRISGSTIAVISDGDFVGQTYATGRLAPR CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCC EAGHRDLLTILSIADGRLVSGSLPLSNSVTAAPEVLALTRDGRTAFVTERLGERLEGGDT CCCCHHHEEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCE VADLPPGNRLFAADLTDEAKPRLADTAELAAFPEALAIGPDGRLVAVVSNTAEASFLQIV EEECCCCCEEEEECCCCCCCCCCCCHHHHHHCCHHEEECCCCCEEEEEECCCCCEEEEEE PYDGGRFGEVTRIDLDELGVRGSAGGPRGGVTATNVQWHPSGRFLAVNINTQNRVAFFEL ECCCCCCCCEEEEEHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEE TDEDGRPGLRPWGNIVETGADPFVGRFTPDGGFYLTSDWGRNFTATDLAGRIPDRPSAIS ECCCCCCCCCCCCHHHHCCCCCCEEEECCCCCEEEECCCCCCEEHHHHCCCCCCCCCCEE VIRLADRTRRGDDARHERIASVETDVAAEGLAVSPDGRFVATVNMRGTAFPTDTDRFQPE EEEEHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCC GTVTLLAFDSSAGALTKIGDYPFEGVLPEGGTFDLTGDHFLATVFHGHDGADDSVGSGLE CCEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCEE VFHVIKGDNPALERLGRIPLPHGVHHVDIAGGQ EEEEEECCCHHHHHHCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA