| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632942
Identifier: 110632942
GI number: 110632942
Start: 646080
End: 648638
Strand: Direct
Name: 110632942
Synonym: Meso_0585
Alternate gene names: NA
Gene position: 646080-648638 (Clockwise)
Preceding gene: 110632937
Following gene: 110632943
Centisome position: 14.64
GC content: 64.4
Gene sequence:
>2559_bases ATGCGCCATGCTGGGTTCTCGCGTCTTCTGCGCGGCGGGCGCATGACCAAGTGGAAGGGCATGGCGGCGAGTTATGCGCC GCATGCCGCGGAGCTATTCTCATGCGCGGCGCGCGCGTCAGCCGCCATGCTGGCTGCGGTATTGCTTGGTGCCCTCGCCA ATCCAGCGGAAGCTGCCGACAGATACTGGGACGCCAACCAGAACGGCGCCGGCTGGGGCGGCACCGGCGTCTGGGATGTC AGCAACTTTAACTGGAGTCCCAACAGTGACGGGACCAGCGGCCCTTTCAACGCCGCGTGGAACAACGGAGGCATCGTCCC CGGTACGATCGACAACGCCATCTTCGGCGGCACTGCGGGCACGGTGACGCTCGGCGCACCCATTACCGTCCATAACATCA CTTTCCAAACCGGCGGCTATACGTTTACCGGCAATACGCTCACCCTGGCCGGCGCGACGCCCACCATCGATACAGGCACT GGCACCCAGACTATCAACTCTGTCGTCGCCGGGTCGGCAGGCCTGACCAAGACCGGCACGGGCACGCTTTCCCTGACTGG GACGAACACGTTCAGCGGCGGGATAACGCTGAGCGGCGGCACATTGCAGGCCAGTGGCAATGCCGCGCTCGGCGCAGCCA GCAACACGATCACGACCACGGCCAACGCAATACTGAACGTCGAGTCGGGCTCGATGGAGGACCGCGTCGTATTGATTGCG GGAGGCACGACGCTCTCCGTACAGGGCAACGGCGTGGGATCGGCGAAGTTCACAGGTTCGGGCAATCTCAACGCCTTTGG CGGGGTGACGCTCAACAATGATGAGAACGACTTTACCGGTACGACGACGCTCAGCGGCTATTTCGGGAGCAACGCTAGTA TCTTTTTCACCTCTGTTGGTGACGTCGGCGACGCGAGTTCGCTGGGCGCCGGCGGAACGATTACGTTCACCAGAGGAGAT CTTTCGCTCCTACGTTATATTGGCGGCGGCGACAGCTCGAACCGGGACTGGGTAATGTCGGGTGACGGGGCTCGTCGTTT CCTCAATGAAGGCACGGGAACGCTGACGCTCAGCGGCGACATCAGCCTGCTGCAGCGCACTAATTTCGAAGCCGTCGGCG CGGACTTCGATCTGCAGGGCGAAATCAGCGGCGCCGGCTCAGCTGTCTTCACCGCGGCTTCGGGTCGCACAATGACTCTG GGCGACGCCAACAGCTTCACGGGAACTGCGACCATAACCGGGGCCGGCGTCGTCAGCGTCGGGAAGCTTTCCAACGCCGG GGTGAACAGCTCGCTCGGCGCGGGAACCGGCGACGATATAATTATCAACAATGGCACGCTGCAATATACGGGCGACGGCG ACAGCAGCGACCGCACGTGGTATTTCTCGACTGCCGCCACTTTGCAGCACGACGGCGACGGCGCGCTGACTCTCTCCGGC GCAATGGTGTTCAATCCCGGCCCCACCGTCGAAGTGCTCACGCTCAGCGGCACCTCCGACGATGAAAACAGGATAGAAGG CCCCATCAGTGGCACTGGCCGTGTCGTCATCAACAGCGCCGGTACCTGGGTGTTTTCCGGCGCCAACACCTATACGGGCA GCACCACCGTCAAGAGCGGCACGCTACGCGCTGGCGGCGCATCGGCCTTGGGCGCGTCGGGAACCGTCGTGGTCGATGGC GGCGTGCTCGACCTCAACAATCACAATTACACCTTCGGCAGGCTTGATGGCTTGGGCGGCGAGGTGAAGCTGGGCACCGG CAACCTTACGCTCGACACCGCCGACGGCGTAAACGCGGTCTATGCCGGCAGCATCACGGGCGACGGCGGTCTCTACAAGA CCGGCGCCGGCAAGCAGACCTTGACCGGACAGAGCACGTATGCGGGCGCGACGAATATCTCAGGCGGCACGCTGGAACTG AGCTTCGTCGGGACCGGCGGCCCCACGTCCGATATCATCTCCGCCTCCTCGGCGCTCAACATGTCGGGCGGCACGCTGAC GGTGACGGGCGTCGCCGGCGAAGGCAACACCCAGACCTTCAACGGGCTCGAGATCGGGGGCGGCGGCAACACGATCAGCG CCACCAATGCGACCGTCAATTTGGGCGAGGTCACCCGCGACGCCGGCATCGTCGACTTCAGCATCGGCGCTGGCGCCAAG ATGACCGTTTCGGCAGACACCGAGCTCGGCGGCTGGGCCACCGTCAACGGCCGCGACTATGCCGATGTGAACGACCAGAA CGAGATCGTGGCCTTCACCAATTACGCGCTGGGGGACGACGCGGCGTCGTGGAGCGACGGCGAAATCGTCGCCGACACGG ATGGCGACGCCAATACGCCGTTCTACGGCATCGTGGACGAGGCCGGCGGCGATGATGTGGTGCAACTCGGCGGCTTGCGC TACGCGGCGGCGCGGGATTCCACGGTGACGGTCGCCGACGAAAAGACACTCGGCGTCGACGGCGCTATCATCGTGGGCGA CCAAGTGGGCAGCAACAGCTTGGCCATCCAGGGCGGCTCGATACGCGGGGCCGCCGGCGGCGTCCTGGGCATCCAGTAG
Upstream 100 bases:
>100_bases GCATTCGGCTGCGATGTATGATGGGGGCAGGAAAATGCGGCGGAACTCCGAGGGTGCGGCTTGTGCCGGGCTGAGCAGAT CAGATCGGGCAGGGCAGGCG
Downstream 100 bases:
>100_bases AACAGCACCGGCACCTTCACCATCAGCTCGACCATCGTCAACAATGGCGGGGCGACAGGGCTCACCGTGATGGGGACGGG AACGGCCGCCGGCAAGGTCG
Product: beta strand repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 852; Mature: 852
Protein sequence:
>852_residues MRHAGFSRLLRGGRMTKWKGMAASYAPHAAELFSCAARASAAMLAAVLLGALANPAEAADRYWDANQNGAGWGGTGVWDV SNFNWSPNSDGTSGPFNAAWNNGGIVPGTIDNAIFGGTAGTVTLGAPITVHNITFQTGGYTFTGNTLTLAGATPTIDTGT GTQTINSVVAGSAGLTKTGTGTLSLTGTNTFSGGITLSGGTLQASGNAALGAASNTITTTANAILNVESGSMEDRVVLIA GGTTLSVQGNGVGSAKFTGSGNLNAFGGVTLNNDENDFTGTTTLSGYFGSNASIFFTSVGDVGDASSLGAGGTITFTRGD LSLLRYIGGGDSSNRDWVMSGDGARRFLNEGTGTLTLSGDISLLQRTNFEAVGADFDLQGEISGAGSAVFTAASGRTMTL GDANSFTGTATITGAGVVSVGKLSNAGVNSSLGAGTGDDIIINNGTLQYTGDGDSSDRTWYFSTAATLQHDGDGALTLSG AMVFNPGPTVEVLTLSGTSDDENRIEGPISGTGRVVINSAGTWVFSGANTYTGSTTVKSGTLRAGGASALGASGTVVVDG GVLDLNNHNYTFGRLDGLGGEVKLGTGNLTLDTADGVNAVYAGSITGDGGLYKTGAGKQTLTGQSTYAGATNISGGTLEL SFVGTGGPTSDIISASSALNMSGGTLTVTGVAGEGNTQTFNGLEIGGGGNTISATNATVNLGEVTRDAGIVDFSIGAGAK MTVSADTELGGWATVNGRDYADVNDQNEIVAFTNYALGDDAASWSDGEIVADTDGDANTPFYGIVDEAGGDDVVQLGGLR YAAARDSTVTVADEKTLGVDGAIIVGDQVGSNSLAIQGGSIRGAAGGVLGIQ
Sequences:
>Translated_852_residues MRHAGFSRLLRGGRMTKWKGMAASYAPHAAELFSCAARASAAMLAAVLLGALANPAEAADRYWDANQNGAGWGGTGVWDV SNFNWSPNSDGTSGPFNAAWNNGGIVPGTIDNAIFGGTAGTVTLGAPITVHNITFQTGGYTFTGNTLTLAGATPTIDTGT GTQTINSVVAGSAGLTKTGTGTLSLTGTNTFSGGITLSGGTLQASGNAALGAASNTITTTANAILNVESGSMEDRVVLIA GGTTLSVQGNGVGSAKFTGSGNLNAFGGVTLNNDENDFTGTTTLSGYFGSNASIFFTSVGDVGDASSLGAGGTITFTRGD LSLLRYIGGGDSSNRDWVMSGDGARRFLNEGTGTLTLSGDISLLQRTNFEAVGADFDLQGEISGAGSAVFTAASGRTMTL GDANSFTGTATITGAGVVSVGKLSNAGVNSSLGAGTGDDIIINNGTLQYTGDGDSSDRTWYFSTAATLQHDGDGALTLSG AMVFNPGPTVEVLTLSGTSDDENRIEGPISGTGRVVINSAGTWVFSGANTYTGSTTVKSGTLRAGGASALGASGTVVVDG GVLDLNNHNYTFGRLDGLGGEVKLGTGNLTLDTADGVNAVYAGSITGDGGLYKTGAGKQTLTGQSTYAGATNISGGTLEL SFVGTGGPTSDIISASSALNMSGGTLTVTGVAGEGNTQTFNGLEIGGGGNTISATNATVNLGEVTRDAGIVDFSIGAGAK MTVSADTELGGWATVNGRDYADVNDQNEIVAFTNYALGDDAASWSDGEIVADTDGDANTPFYGIVDEAGGDDVVQLGGLR YAAARDSTVTVADEKTLGVDGAIIVGDQVGSNSLAIQGGSIRGAAGGVLGIQ >Mature_852_residues MRHAGFSRLLRGGRMTKWKGMAASYAPHAAELFSCAARASAAMLAAVLLGALANPAEAADRYWDANQNGAGWGGTGVWDV SNFNWSPNSDGTSGPFNAAWNNGGIVPGTIDNAIFGGTAGTVTLGAPITVHNITFQTGGYTFTGNTLTLAGATPTIDTGT GTQTINSVVAGSAGLTKTGTGTLSLTGTNTFSGGITLSGGTLQASGNAALGAASNTITTTANAILNVESGSMEDRVVLIA GGTTLSVQGNGVGSAKFTGSGNLNAFGGVTLNNDENDFTGTTTLSGYFGSNASIFFTSVGDVGDASSLGAGGTITFTRGD LSLLRYIGGGDSSNRDWVMSGDGARRFLNEGTGTLTLSGDISLLQRTNFEAVGADFDLQGEISGAGSAVFTAASGRTMTL GDANSFTGTATITGAGVVSVGKLSNAGVNSSLGAGTGDDIIINNGTLQYTGDGDSSDRTWYFSTAATLQHDGDGALTLSG AMVFNPGPTVEVLTLSGTSDDENRIEGPISGTGRVVINSAGTWVFSGANTYTGSTTVKSGTLRAGGASALGASGTVVVDG GVLDLNNHNYTFGRLDGLGGEVKLGTGNLTLDTADGVNAVYAGSITGDGGLYKTGAGKQTLTGQSTYAGATNISGGTLEL SFVGTGGPTSDIISASSALNMSGGTLTVTGVAGEGNTQTFNGLEIGGGGNTISATNATVNLGEVTRDAGIVDFSIGAGAK MTVSADTELGGWATVNGRDYADVNDQNEIVAFTNYALGDDAASWSDGEIVADTDGDANTPFYGIVDEAGGDDVVQLGGLR YAAARDSTVTVADEKTLGVDGAIIVGDQVGSNSLAIQGGSIRGAAGGVLGIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84521; Mature: 84521
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHAGFSRLLRGGRMTKWKGMAASYAPHAAELFSCAARASAAMLAAVLLGALANPAEAAD CCCCCHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RYWDANQNGAGWGGTGVWDVSNFNWSPNSDGTSGPFNAAWNNGGIVPGTIDNAIFGGTAG HHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC TVTLGAPITVHNITFQTGGYTFTGNTLTLAGATPTIDTGTGTQTINSVVAGSAGLTKTGT EEEECCCEEEEEEEEECCCEEEECCEEEEECCCCCEECCCCHHHHHHHHCCCCCCCCCCC GTLSLTGTNTFSGGITLSGGTLQASGNAALGAASNTITTTANAILNVESGSMEDRVVLIA EEEEEEECCCCCCCEEEECCEEEECCCEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEE GGTTLSVQGNGVGSAKFTGSGNLNAFGGVTLNNDENDFTGTTTLSGYFGSNASIFFTSVG CCEEEEEECCCCCCEEEECCCCCCEEECEEECCCCCCCCEEEEEEEEECCCCEEEEEECC DVGDASSLGAGGTITFTRGDLSLLRYIGGGDSSNRDWVMSGDGARRFLNEGTGTLTLSGD CCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEECCHHHHHHHCCCEEEEEECC ISLLQRTNFEAVGADFDLQGEISGAGSAVFTAASGRTMTLGDANSFTGTATITGAGVVSV EEEEEECCCEEECCCEEEEEEECCCCCEEEEECCCCEEEECCCCCCCCEEEEECCCEEEE GKLSNAGVNSSLGAGTGDDIIINNGTLQYTGDGDSSDRTWYFSTAATLQHDGDGALTLSG CCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEEE AMVFNPGPTVEVLTLSGTSDDENRIEGPISGTGRVVINSAGTWVFSGANTYTGSTTVKSG EEEECCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCCEEECCCCEECCCEEEECC TLRAGGASALGASGTVVVDGGVLDLNNHNYTFGRLDGLGGEVKLGTGNLTLDTADGVNAV EEECCCCCCCCCCCEEEEECCEEEECCCCEEEEEECCCCCEEEEECCCEEEECCCCCCEE YAGSITGDGGLYKTGAGKQTLTGQSTYAGATNISGGTLELSFVGTGGPTSDIISASSALN EEEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCCEEE MSGGTLTVTGVAGEGNTQTFNGLEIGGGGNTISATNATVNLGEVTRDAGIVDFSIGAGAK CCCCEEEEEEECCCCCCEEECCEEECCCCCEEEECCCEEECCCCCCCCCEEEEECCCCCE MTVSADTELGGWATVNGRDYADVNDQNEIVAFTNYALGDDAASWSDGEIVADTDGDANTP EEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCC FYGIVDEAGGDDVVQLGGLRYAAARDSTVTVADEKTLGVDGAIIVGDQVGSNSLAIQGGS EEEEEECCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEECCC IRGAAGGVLGIQ CCCCCCCEEECC >Mature Secondary Structure MRHAGFSRLLRGGRMTKWKGMAASYAPHAAELFSCAARASAAMLAAVLLGALANPAEAAD CCCCCHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RYWDANQNGAGWGGTGVWDVSNFNWSPNSDGTSGPFNAAWNNGGIVPGTIDNAIFGGTAG HHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC TVTLGAPITVHNITFQTGGYTFTGNTLTLAGATPTIDTGTGTQTINSVVAGSAGLTKTGT EEEECCCEEEEEEEEECCCEEEECCEEEEECCCCCEECCCCHHHHHHHHCCCCCCCCCCC GTLSLTGTNTFSGGITLSGGTLQASGNAALGAASNTITTTANAILNVESGSMEDRVVLIA EEEEEEECCCCCCCEEEECCEEEECCCEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEE GGTTLSVQGNGVGSAKFTGSGNLNAFGGVTLNNDENDFTGTTTLSGYFGSNASIFFTSVG CCEEEEEECCCCCCEEEECCCCCCEEECEEECCCCCCCCEEEEEEEEECCCCEEEEEECC DVGDASSLGAGGTITFTRGDLSLLRYIGGGDSSNRDWVMSGDGARRFLNEGTGTLTLSGD CCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEECCHHHHHHHCCCEEEEEECC ISLLQRTNFEAVGADFDLQGEISGAGSAVFTAASGRTMTLGDANSFTGTATITGAGVVSV EEEEEECCCEEECCCEEEEEEECCCCCEEEEECCCCEEEECCCCCCCCEEEEECCCEEEE GKLSNAGVNSSLGAGTGDDIIINNGTLQYTGDGDSSDRTWYFSTAATLQHDGDGALTLSG CCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEEE AMVFNPGPTVEVLTLSGTSDDENRIEGPISGTGRVVINSAGTWVFSGANTYTGSTTVKSG EEEECCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCCEEECCCCEECCCEEEECC TLRAGGASALGASGTVVVDGGVLDLNNHNYTFGRLDGLGGEVKLGTGNLTLDTADGVNAV EEECCCCCCCCCCCEEEEECCEEEECCCCEEEEEECCCCCEEEEECCCEEEECCCCCCEE YAGSITGDGGLYKTGAGKQTLTGQSTYAGATNISGGTLELSFVGTGGPTSDIISASSALN EEEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCCEEE MSGGTLTVTGVAGEGNTQTFNGLEIGGGGNTISATNATVNLGEVTRDAGIVDFSIGAGAK CCCCEEEEEEECCCCCCEEECCEEECCCCCEEEECCCEEECCCCCCCCCEEEEECCCCCE MTVSADTELGGWATVNGRDYADVNDQNEIVAFTNYALGDDAASWSDGEIVADTDGDANTP EEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCC FYGIVDEAGGDDVVQLGGLRYAAARDSTVTVADEKTLGVDGAIIVGDQVGSNSLAIQGGS EEEEEECCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEECCC IRGAAGGVLGIQ CCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA