| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yhdN [H]
Identifier: 110632933
GI number: 110632933
Start: 635317
End: 636354
Strand: Direct
Name: yhdN [H]
Synonym: Meso_0575
Alternate gene names: 110632933
Gene position: 635317-636354 (Clockwise)
Preceding gene: 110632932
Following gene: 110632934
Centisome position: 14.4
GC content: 61.27
Gene sequence:
>1038_bases ATGACACGAGTTCACAGGCGCACAATCCTGCAGGCTGCGGGTGCAGCGATTGGATCGATGGCGATTGGTTCGCTGGCTGG CGGCCAAGCCTTTGCGCAGCAGGCAACTGAGCGGCCAATCATCAGGCGCGCAATCCCCAAGACGGGGGAGGAAATTCCTG TCGTTGGCCTTGGCACCTTCGAGACGTTCGATGTCTTGCCCGGCGAGCCGCGCGAGCACATCCGAGAGATCATGCGCCGC TTTCATGCGGCTGGCGGACGGGTAGTCGACACGTCGCCGCTCTATGGCATGTCGGAAGTGAGCGTCGGCGACTTTGCCAC CGAGCTCGGCATCGCCGACGACCTCTTCATCACCAACAAGACATGGACGACTGGCGAATGGCTCTCGGATGACAGCCATT CCGAGGCGCAGCTCCGCCGCTCGATGGAACGGCTGTGGCGCAACAGAATGGACGTCCAGCAAGTTCACAGTCTGGAGAAC GTCGATCAAGTCCTGCACGCGCTTCGGCGATGGAAGAGTGAAGGGCGGGTCCGGTACATCGGTGTCACGCAGTGGAGCCC GGAATACTACGACACGATGGAGCGGCTTATCCGCACCGGTGATCTCGATTTCGTGCAGGTCAATTACACGATCTTCTCCC GCCAGGCGGAGGAGCGCATCTTGCCGGCCTGCGCGGACAACGGCGTTGCCGTCCAGATCAACATTCCGTTCGAGAAGGCG CGGCTCTTCACCTGTGTAGAAGGCAGGCCGCTACCCGAATTCGCGGCCGACTTCGGTGCGGAAACCTGGGCGCAGTTCTT CCTCAAGTTCATCATCGCGCATCCGGCCGTCACCAATGTCATACCTGCGACGAGCAATCCCGAGCATCTGACAGATAACA TGGGCGCGCTCTACGGTGAGCTGCCGGACCAGGCCATGCGAGCGAGGATGGTCGAGCACATGGAAGGGATCGAGGGATTT GGCGCCACGCTACGTCAGCCGCCGTATCCGGGAAAGAACTATGGCGGGGTCGTCACCTGGCCATTCAGGAGGACCTGA
Upstream 100 bases:
>100_bases GGAAAACATCAGCTCTGTGCGACCCAGGTCAGGATCGTGAGCGACCATCCGCAGCAAAAGGTCTACTCCCCAGGCCTGTA AACCAGGTACGGAGAGCATG
Downstream 100 bases:
>100_bases AGGTGGGCGGTCGACTCGGAAGCAAAGCCCTGCTGGTGATCGGCATCATTGTTGGCATTGGATCACCGGCGCGGTCGGAA GACGGCGAACGTGTCACGAT
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTRVHRRTILQAAGAAIGSMAIGSLAGGQAFAQQATERPIIRRAIPKTGEEIPVVGLGTFETFDVLPGEPREHIREIMRR FHAAGGRVVDTSPLYGMSEVSVGDFATELGIADDLFITNKTWTTGEWLSDDSHSEAQLRRSMERLWRNRMDVQQVHSLEN VDQVLHALRRWKSEGRVRYIGVTQWSPEYYDTMERLIRTGDLDFVQVNYTIFSRQAEERILPACADNGVAVQINIPFEKA RLFTCVEGRPLPEFAADFGAETWAQFFLKFIIAHPAVTNVIPATSNPEHLTDNMGALYGELPDQAMRARMVEHMEGIEGF GATLRQPPYPGKNYGGVVTWPFRRT
Sequences:
>Translated_345_residues MTRVHRRTILQAAGAAIGSMAIGSLAGGQAFAQQATERPIIRRAIPKTGEEIPVVGLGTFETFDVLPGEPREHIREIMRR FHAAGGRVVDTSPLYGMSEVSVGDFATELGIADDLFITNKTWTTGEWLSDDSHSEAQLRRSMERLWRNRMDVQQVHSLEN VDQVLHALRRWKSEGRVRYIGVTQWSPEYYDTMERLIRTGDLDFVQVNYTIFSRQAEERILPACADNGVAVQINIPFEKA RLFTCVEGRPLPEFAADFGAETWAQFFLKFIIAHPAVTNVIPATSNPEHLTDNMGALYGELPDQAMRARMVEHMEGIEGF GATLRQPPYPGKNYGGVVTWPFRRT >Mature_344_residues TRVHRRTILQAAGAAIGSMAIGSLAGGQAFAQQATERPIIRRAIPKTGEEIPVVGLGTFETFDVLPGEPREHIREIMRRF HAAGGRVVDTSPLYGMSEVSVGDFATELGIADDLFITNKTWTTGEWLSDDSHSEAQLRRSMERLWRNRMDVQQVHSLENV DQVLHALRRWKSEGRVRYIGVTQWSPEYYDTMERLIRTGDLDFVQVNYTIFSRQAEERILPACADNGVAVQINIPFEKAR LFTCVEGRPLPEFAADFGAETWAQFFLKFIIAHPAVTNVIPATSNPEHLTDNMGALYGELPDQAMRARMVEHMEGIEGFG ATLRQPPYPGKNYGGVVTWPFRRT
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=287, Percent_Identity=25.0871080139373, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38793; Mature: 38661
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVHRRTILQAAGAAIGSMAIGSLAGGQAFAQQATERPIIRRAIPKTGEEIPVVGLGTF CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEECCCC ETFDVLPGEPREHIREIMRRFHAAGGRVVDTSPLYGMSEVSVGDFATELGIADDLFITNK HHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEECC TWTTGEWLSDDSHSEAQLRRSMERLWRNRMDVQQVHSLENVDQVLHALRRWKSEGRVRYI CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GVTQWSPEYYDTMERLIRTGDLDFVQVNYTIFSRQAEERILPACADNGVAVQINIPFEKA EEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHCHHCCCCCEEEEEECCHHHH RLFTCVEGRPLPEFAADFGAETWAQFFLKFIIAHPAVTNVIPATSNPEHLTDNMGALYGE HEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHC LPDQAMRARMVEHMEGIEGFGATLRQPPYPGKNYGGVVTWPFRRT CCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure TRVHRRTILQAAGAAIGSMAIGSLAGGQAFAQQATERPIIRRAIPKTGEEIPVVGLGTF CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEECCCC ETFDVLPGEPREHIREIMRRFHAAGGRVVDTSPLYGMSEVSVGDFATELGIADDLFITNK HHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEECC TWTTGEWLSDDSHSEAQLRRSMERLWRNRMDVQQVHSLENVDQVLHALRRWKSEGRVRYI CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GVTQWSPEYYDTMERLIRTGDLDFVQVNYTIFSRQAEERILPACADNGVAVQINIPFEKA EEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHCHHCCCCCEEEEEECCHHHH RLFTCVEGRPLPEFAADFGAETWAQFFLKFIIAHPAVTNVIPATSNPEHLTDNMGALYGE HEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHC LPDQAMRARMVEHMEGIEGFGATLRQPPYPGKNYGGVVTWPFRRT CCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]