| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632892
Identifier: 110632892
GI number: 110632892
Start: 581955
End: 582707
Strand: Direct
Name: 110632892
Synonym: Meso_0532
Alternate gene names: NA
Gene position: 581955-582707 (Clockwise)
Preceding gene: 110632871
Following gene: 110632900
Centisome position: 13.19
GC content: 60.56
Gene sequence:
>753_bases ATGGCAAGCGGTTTCCACGTGCCGGATGGCAACGAGGCCTTGAGGTCGGATATTCCTGCCATCGTCGAACTCATCGAGCG GACGGCACGTTGGGTACATCCCGACACGTTTCGCGCGCTGCCGGTCTGGGCACCGCATACTGCGCGCGGTCGGCCGCTCT TTGATGCCGCGTGGACGCGGCGTTACACGAACACGCGCAAGCTAACCGGCGTCACGGCGGAGAAGTTCGAAGGAAATGTG GCTGCGCTGAACGCCCTTGTCGCCGCGCTCGACGTCGCGTCCCCAAGGCCGAAAAACTGGACCGTCTGTCACATCTGGGG TTACGACGATCCATCGTTCGCGCAGGGCAGCAGCGTGGTGCAGGATCCACGCTATTTCTCCTGTGTCGCGAACATGGTGT GGCTGCCCACCTCGCTGAAGGGCTTCACCGACACACTTCCTGAAATCAAAGCCATGCTGCGCGTATGCGCTTTCCATCTG TACGGATGGGCATGCGAGCACGAGGCGGTCGCCGAACAGGCTGAACAGGTGCGATCTGGCTGGACACCTCCCGACTACCC GAAGAGTTGGCCCAACGCGGATCGGCGAGGCGTCTTGCCTCCGGGGACCGCGCCGTTCACGCCGCGCATCGAACGCGAAA TCGAAAAGCGAAAGTCAAAGATTCGGTCCGCTCTCGCCAGCGCCAATTTGCTTCATTATCCGAAGACTGAGGTCGAGAAT GTTCTGAAGTTCTGGAAAGTCGATTTGGGATAG
Upstream 100 bases:
>100_bases CGGTCTGAAATGGTAGCTGTGATGGTCTCAACAGCCTTGCCGCCAAGACATCAACCGGACGTCTCGCGCAGACGAGGCGA CAACTTCGTCTGGGAGGAAA
Downstream 100 bases:
>100_bases GCGGCGCTCACGCGCCGCCGAATCTCCAGACAGGGATGCCGAGCTTCTTCGCCTTGTCGGCCAGGTTGTCCTGGATGCCG GTGCCGGGGAAGACGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MASGFHVPDGNEALRSDIPAIVELIERTARWVHPDTFRALPVWAPHTARGRPLFDAAWTRRYTNTRKLTGVTAEKFEGNV AALNALVAALDVASPRPKNWTVCHIWGYDDPSFAQGSSVVQDPRYFSCVANMVWLPTSLKGFTDTLPEIKAMLRVCAFHL YGWACEHEAVAEQAEQVRSGWTPPDYPKSWPNADRRGVLPPGTAPFTPRIEREIEKRKSKIRSALASANLLHYPKTEVEN VLKFWKVDLG
Sequences:
>Translated_250_residues MASGFHVPDGNEALRSDIPAIVELIERTARWVHPDTFRALPVWAPHTARGRPLFDAAWTRRYTNTRKLTGVTAEKFEGNV AALNALVAALDVASPRPKNWTVCHIWGYDDPSFAQGSSVVQDPRYFSCVANMVWLPTSLKGFTDTLPEIKAMLRVCAFHL YGWACEHEAVAEQAEQVRSGWTPPDYPKSWPNADRRGVLPPGTAPFTPRIEREIEKRKSKIRSALASANLLHYPKTEVEN VLKFWKVDLG >Mature_249_residues ASGFHVPDGNEALRSDIPAIVELIERTARWVHPDTFRALPVWAPHTARGRPLFDAAWTRRYTNTRKLTGVTAEKFEGNVA ALNALVAALDVASPRPKNWTVCHIWGYDDPSFAQGSSVVQDPRYFSCVANMVWLPTSLKGFTDTLPEIKAMLRVCAFHLY GWACEHEAVAEQAEQVRSGWTPPDYPKSWPNADRRGVLPPGTAPFTPRIEREIEKRKSKIRSALASANLLHYPKTEVENV LKFWKVDLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28090; Mature: 27959
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGFHVPDGNEALRSDIPAIVELIERTARWVHPDTFRALPVWAPHTARGRPLFDAAWTR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RYTNTRKLTGVTAEKFEGNVAALNALVAALDVASPRPKNWTVCHIWGYDDPSFAQGSSVV HHCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHH QDPRYFSCVANMVWLPTSLKGFTDTLPEIKAMLRVCAFHLYGWACEHEAVAEQAEQVRSG CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WTPPDYPKSWPNADRRGVLPPGTAPFTPRIEREIEKRKSKIRSALASANLLHYPKTEVEN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLKFWKVDLG HHHHHHHCCC >Mature Secondary Structure ASGFHVPDGNEALRSDIPAIVELIERTARWVHPDTFRALPVWAPHTARGRPLFDAAWTR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RYTNTRKLTGVTAEKFEGNVAALNALVAALDVASPRPKNWTVCHIWGYDDPSFAQGSSVV HHCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHH QDPRYFSCVANMVWLPTSLKGFTDTLPEIKAMLRVCAFHLYGWACEHEAVAEQAEQVRSG CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WTPPDYPKSWPNADRRGVLPPGTAPFTPRIEREIEKRKSKIRSALASANLLHYPKTEVEN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLKFWKVDLG HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA