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The map label for this gene is uidR [C]

Identifier: 110632844

GI number: 110632844

Start: 533186

End: 533863

Strand: Direct

Name: uidR [C]

Synonym: Meso_0483

Alternate gene names: 110632844

Gene position: 533186-533863 (Clockwise)

Preceding gene: 110632843

Following gene: 110632845

Centisome position: 12.08

GC content: 55.46

Gene sequence:

>678_bases
ATGAGTCAGAAGCAGTCGTCCAGGGACGTGATTCTCGATGCGGCCGAGAAGGTCTTCGCAACCTTTGGGTTCGAAGGGGC
AAGCATGCGTGAGATTGCCAATGAATCGGGCATATCCCAGGCGCTGCTGCACTACCACTTCCAAAGCAAGGACAATCTCT
ACGAAGAGATCTTTGCGCGCCGTGCCAGGATCATCAATGGATACCGTGCACAACTCCTCGACGAATTGTTCGCCGGGGAG
CGAAAACCTGAACTTGAGGATGTGCTGGAGGTGATGTTCTGCCCAGCATCAGATGCGCTTGGCAGCGGCACACAGAGCGA
GGCATTCACGCAAATGGTTTCTGCATTAGTCGCGGGCGGAGATGAACGCTCCCGCGCACTAATGATCAAGCACTACGACC
CGATTGCTCGGCGGTTCATGGAGGCATTCATGAAACTCGAAACGCCGAAACTCAGCCAGGAAGATGCCGCTTGGGCGTAC
CTCTTTGCTCATTCCGCACGCATGCAAATCTATGCACACACGGGGCGCCCGGAGCGGTTAACTGGCAAACCTCTGAGCGA
GACCCGCCTACGTAGAGTGAAAGATAACGCTATTCGGTACACGGCGGCCGGTATCCGAACCCTTGGCATTAATGGCTCGT
CAGTGCGTTCTTCAAGAGAGTCTGCGCATCGCGCTTAA

Upstream 100 bases:

>100_bases
GACGGTATTTGAACAAGCGCGCAAAGTCTCGCGAAGAAGATCTGGCTCAGCGAGGGACACCTTCTTGACCCGTGATTCAG
TCAATGAGAAGGATGCGCGC

Downstream 100 bases:

>100_bases
CAGCGTAGAAAACGCTGTAGCACTGGCAGTAGTTTCAGCTGAAAAAACTGATCACTCGTGATTTACCGGTAAGGGGAAGA
AAATTTCCTCCCTCCTGTTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator Protein; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; Transcliptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSQKQSSRDVILDAAEKVFATFGFEGASMREIANESGISQALLHYHFQSKDNLYEEIFARRARIINGYRAQLLDELFAGE
RKPELEDVLEVMFCPASDALGSGTQSEAFTQMVSALVAGGDERSRALMIKHYDPIARRFMEAFMKLETPKLSQEDAAWAY
LFAHSARMQIYAHTGRPERLTGKPLSETRLRRVKDNAIRYTAAGIRTLGINGSSVRSSRESAHRA

Sequences:

>Translated_225_residues
MSQKQSSRDVILDAAEKVFATFGFEGASMREIANESGISQALLHYHFQSKDNLYEEIFARRARIINGYRAQLLDELFAGE
RKPELEDVLEVMFCPASDALGSGTQSEAFTQMVSALVAGGDERSRALMIKHYDPIARRFMEAFMKLETPKLSQEDAAWAY
LFAHSARMQIYAHTGRPERLTGKPLSETRLRRVKDNAIRYTAAGIRTLGINGSSVRSSRESAHRA
>Mature_224_residues
SQKQSSRDVILDAAEKVFATFGFEGASMREIANESGISQALLHYHFQSKDNLYEEIFARRARIINGYRAQLLDELFAGER
KPELEDVLEVMFCPASDALGSGTQSEAFTQMVSALVAGGDERSRALMIKHYDPIARRFMEAFMKLETPKLSQEDAAWAYL
FAHSARMQIYAHTGRPERLTGKPLSETRLRRVKDNAIRYTAAGIRTLGINGSSVRSSRESAHRA

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25254; Mature: 25123

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKQSSRDVILDAAEKVFATFGFEGASMREIANESGISQALLHYHFQSKDNLYEEIFAR
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RARIINGYRAQLLDELFAGERKPELEDVLEVMFCPASDALGSGTQSEAFTQMVSALVAGG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCC
DERSRALMIKHYDPIARRFMEAFMKLETPKLSQEDAAWAYLFAHSARMQIYAHTGRPERL
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCC
TGKPLSETRLRRVKDNAIRYTAAGIRTLGINGSSVRSSRESAHRA
CCCCHHHHHHHHHHHHHHEEECCCEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SQKQSSRDVILDAAEKVFATFGFEGASMREIANESGISQALLHYHFQSKDNLYEEIFAR
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RARIINGYRAQLLDELFAGERKPELEDVLEVMFCPASDALGSGTQSEAFTQMVSALVAGG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCC
DERSRALMIKHYDPIARRFMEAFMKLETPKLSQEDAAWAYLFAHSARMQIYAHTGRPERL
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCC
TGKPLSETRLRRVKDNAIRYTAAGIRTLGINGSSVRSSRESAHRA
CCCCHHHHHHHHHHHHHHEEECCCEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA