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The map label for this gene is ifcA [H]

Identifier: 110632843

GI number: 110632843

Start: 531612

End: 533087

Strand: Direct

Name: ifcA [H]

Synonym: Meso_0482

Alternate gene names: 110632843

Gene position: 531612-533087 (Clockwise)

Preceding gene: 110632842

Following gene: 110632844

Centisome position: 12.05

GC content: 58.33

Gene sequence:

>1476_bases
ATGGTAGCAGCGGCAGATTTTGACGAAGTGGTGGACGTCGTAGCCATAGGCTACGGCTTCGCCGGTGCATGTGCGGCGAT
CACCGCACATGACGGTGGCGCCAGCGTTATTATTCTAGAGAAGATGCCGCACGGCGGCGGCAACTCTCGTGTGAGTGCCG
GTCAAGGTTTCGTCGCTCTCCCGGGCGATCAAGCGATTCAGGATCTCGTTAATTGGTTGGACGCGATGTGCCTCCAGACT
ACGCCCCGGGATGTACTCGAAGCCTTCGCACGGGGGACGCGGGATCTTCCCCCGTTTCTACGCTCCCTCGGTGGAGAATT
CAGCGTACCGAAGACCAAGATGTTGACAGGCCGGTATCCAAGCGCAGTGAAGGGGCCGAACTTTCCGGAAATTGCGACAA
CTCGATCGATGTTTGACAAGCGCTGCTTGGAAGGTCCAGACGATGTGCCACCATCTCGACGGCTATGGGAACTCTTCTCC
AAAGCGGTTGCCGGCCGGGGCATCAACGTCCGCTACCAGACGCCGGCGACAGATCTAATTCGTGACGATAATGGCTCAAT
AGTCGGCGTTTCTGCCGCGGCGGGCGGGAAGACGATCCGGATTGGAGCACGCAAGGGCGTCGTCATGTCCTGCGGAGGCT
TTATTGCAAATCCTGCCATGCGTTGGGACTACGCTGCGCCAAAACCCCTCAAATTCGCCGGCAACCCTGGCAATACCGGG
GACGGCATCGGCATGGCGATCCGCGCTGGAGCAGATCTCTGGCACATGACGCGCACGTCGACGTTCATTGGCTTTCAGTC
ACCAGATTACGAAGCTGCGTTCTGCATCTTCTTCCCTGGTCCCGGCTTTATCTGGGTAGATAAGTATGGACGGCGTTATA
TAGACGAAACGAGCGTGGAGCTGCACGATTTCGATCGCGTTTTTGGTTACATCGATCCCGACAAGGTTGAGTTTCCGCGC
ATTCCCACCTGGGGCATCTTTGATGAAGAGACTCGGAACGGGGGAGCGCTAACCTGGCCAATCGCTGGCTACAACCGCGA
GACCTACCGGTGGAGCGACGACAACTCGGTCGAGTTGGAGAAGGGTTGGATACGGCGCGCTGAGACGATAGAGGCCCTTG
CCGAGATCACCAATATCGATGAACGGACGCTCACCGAAACCTTGGGCCGCTACAATTCTGGCTGTGCCTCGGGCATTGAT
CCGGAATTCGGTCGACCCGGCGAAACGTTAAAGACACTCGAGCCTCCCTACTACGCGATAGAGCTTCATCCCGTAGCTCT
TAATACCCAGGGCGGCGCAAAGCGTGATGCCGCGGCCCGCGTGATAGATACACGTGGCCAGCCTATCCCTGGCCTTTATT
CCGCCGGCGAGTTCGGCTCAATTTGGGGTCACCTCTATCCCGGCGGCGGCAACATCACCGAAGCGATGGTCTTCGGCCGT
ATCGCCGGCCAATCCATCTTGGCTCGGTCGGCATGA

Upstream 100 bases:

>100_bases
ATGCAGGGACTGCTCGGCTACGGCCTGGCTCTTGAGGGCCTAGCACGCATCAAAATGGACGAAAAGTGACCGTCTCGACC
ATTTCTAGAGGAGGAAGACG

Downstream 100 bases:

>100_bases
CGGTATTTGAACAAGCGCGCAAAGTCTCGCGAAGAAGATCTGGCTCAGCGAGGGACACCTTCTTGACCCGTGATTCAGTC
AATGAGAAGGATGCGCGCAT

Product: fumarate reductase/succinate dehydrogenase flavoprotein-like

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MVAAADFDEVVDVVAIGYGFAGACAAITAHDGGASVIILEKMPHGGGNSRVSAGQGFVALPGDQAIQDLVNWLDAMCLQT
TPRDVLEAFARGTRDLPPFLRSLGGEFSVPKTKMLTGRYPSAVKGPNFPEIATTRSMFDKRCLEGPDDVPPSRRLWELFS
KAVAGRGINVRYQTPATDLIRDDNGSIVGVSAAAGGKTIRIGARKGVVMSCGGFIANPAMRWDYAAPKPLKFAGNPGNTG
DGIGMAIRAGADLWHMTRTSTFIGFQSPDYEAAFCIFFPGPGFIWVDKYGRRYIDETSVELHDFDRVFGYIDPDKVEFPR
IPTWGIFDEETRNGGALTWPIAGYNRETYRWSDDNSVELEKGWIRRAETIEALAEITNIDERTLTETLGRYNSGCASGID
PEFGRPGETLKTLEPPYYAIELHPVALNTQGGAKRDAAARVIDTRGQPIPGLYSAGEFGSIWGHLYPGGGNITEAMVFGR
IAGQSILARSA

Sequences:

>Translated_491_residues
MVAAADFDEVVDVVAIGYGFAGACAAITAHDGGASVIILEKMPHGGGNSRVSAGQGFVALPGDQAIQDLVNWLDAMCLQT
TPRDVLEAFARGTRDLPPFLRSLGGEFSVPKTKMLTGRYPSAVKGPNFPEIATTRSMFDKRCLEGPDDVPPSRRLWELFS
KAVAGRGINVRYQTPATDLIRDDNGSIVGVSAAAGGKTIRIGARKGVVMSCGGFIANPAMRWDYAAPKPLKFAGNPGNTG
DGIGMAIRAGADLWHMTRTSTFIGFQSPDYEAAFCIFFPGPGFIWVDKYGRRYIDETSVELHDFDRVFGYIDPDKVEFPR
IPTWGIFDEETRNGGALTWPIAGYNRETYRWSDDNSVELEKGWIRRAETIEALAEITNIDERTLTETLGRYNSGCASGID
PEFGRPGETLKTLEPPYYAIELHPVALNTQGGAKRDAAARVIDTRGQPIPGLYSAGEFGSIWGHLYPGGGNITEAMVFGR
IAGQSILARSA
>Mature_491_residues
MVAAADFDEVVDVVAIGYGFAGACAAITAHDGGASVIILEKMPHGGGNSRVSAGQGFVALPGDQAIQDLVNWLDAMCLQT
TPRDVLEAFARGTRDLPPFLRSLGGEFSVPKTKMLTGRYPSAVKGPNFPEIATTRSMFDKRCLEGPDDVPPSRRLWELFS
KAVAGRGINVRYQTPATDLIRDDNGSIVGVSAAAGGKTIRIGARKGVVMSCGGFIANPAMRWDYAAPKPLKFAGNPGNTG
DGIGMAIRAGADLWHMTRTSTFIGFQSPDYEAAFCIFFPGPGFIWVDKYGRRYIDETSVELHDFDRVFGYIDPDKVEFPR
IPTWGIFDEETRNGGALTWPIAGYNRETYRWSDDNSVELEKGWIRRAETIEALAEITNIDERTLTETLGRYNSGCASGID
PEFGRPGETLKTLEPPYYAIELHPVALNTQGGAKRDAAARVIDTRGQPIPGLYSAGEFGSIWGHLYPGGGNITEAMVFGR
IAGQSILARSA

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71986328, Length=493, Percent_Identity=26.369168356998, Blast_Score=97, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 53105; Mature: 53105

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAADFDEVVDVVAIGYGFAGACAAITAHDGGASVIILEKMPHGGGNSRVSAGQGFVAL
CCCCCCHHHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEEECCCCCCCCCEECCCCEEEC
PGDQAIQDLVNWLDAMCLQTTPRDVLEAFARGTRDLPPFLRSLGGEFSVPKTKMLTGRYP
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEECCCCC
SAVKGPNFPEIATTRSMFDKRCLEGPDDVPPSRRLWELFSKAVAGRGINVRYQTPATDLI
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHE
RDDNGSIVGVSAAAGGKTIRIGARKGVVMSCGGFIANPAMRWDYAAPKPLKFAGNPGNTG
ECCCCCEEEEEECCCCCEEEEECCCCEEEECCCHHCCCCCCCCCCCCCCEEECCCCCCCC
DGIGMAIRAGADLWHMTRTSTFIGFQSPDYEAAFCIFFPGPGFIWVDKYGRRYIDETSVE
CCCCEEEECCCCEEEEHHCCEEEECCCCCCCEEEEEEECCCCEEEEECCCCHHHCCCCCH
LHDFDRVFGYIDPDKVEFPRIPTWGIFDEETRNGGALTWPIAGYNRETYRWSDDNSVELE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEH
KGWIRRAETIEALAEITNIDERTLTETLGRYNSGCASGIDPEFGRPGETLKTLEPPYYAI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEE
ELHPVALNTQGGAKRDAAARVIDTRGQPIPGLYSAGEFGSIWGHLYPGGGNITEAMVFGR
EEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
IAGQSILARSA
HHCHHHHHCCC
>Mature Secondary Structure
MVAAADFDEVVDVVAIGYGFAGACAAITAHDGGASVIILEKMPHGGGNSRVSAGQGFVAL
CCCCCCHHHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEEECCCCCCCCCEECCCCEEEC
PGDQAIQDLVNWLDAMCLQTTPRDVLEAFARGTRDLPPFLRSLGGEFSVPKTKMLTGRYP
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEECCCCC
SAVKGPNFPEIATTRSMFDKRCLEGPDDVPPSRRLWELFSKAVAGRGINVRYQTPATDLI
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHE
RDDNGSIVGVSAAAGGKTIRIGARKGVVMSCGGFIANPAMRWDYAAPKPLKFAGNPGNTG
ECCCCCEEEEEECCCCCEEEEECCCCEEEECCCHHCCCCCCCCCCCCCCEEECCCCCCCC
DGIGMAIRAGADLWHMTRTSTFIGFQSPDYEAAFCIFFPGPGFIWVDKYGRRYIDETSVE
CCCCEEEECCCCEEEEHHCCEEEECCCCCCCEEEEEEECCCCEEEEECCCCHHHCCCCCH
LHDFDRVFGYIDPDKVEFPRIPTWGIFDEETRNGGALTWPIAGYNRETYRWSDDNSVELE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEH
KGWIRRAETIEALAEITNIDERTLTETLGRYNSGCASGIDPEFGRPGETLKTLEPPYYAI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEE
ELHPVALNTQGGAKRDAAARVIDTRGQPIPGLYSAGEFGSIWGHLYPGGGNITEAMVFGR
EEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
IAGQSILARSA
HHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]