Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632768
Identifier: 110632768
GI number: 110632768
Start: 452430
End: 453524
Strand: Direct
Name: 110632768
Synonym: Meso_0407
Alternate gene names: NA
Gene position: 452430-453524 (Clockwise)
Preceding gene: 110632767
Following gene: 110632771
Centisome position: 10.25
GC content: 62.74
Gene sequence:
>1095_bases TTGACTTCACCTGTGAAGGATCTTCCCATCAGGAAAATGGCTGCCCTCGATCAGGCGATCGCGGAGATTTCCGCATGGGA GACTTCCGTGCCGACCGACCTGAAGGCTTTCAAGCTGCGGGAGAATGCGGAAACCTTCGCGGAAGGTGAACATGCGGCGA TTATCGGGCCGATGCCGGATCGCGGCCCCGCAACGGGCGTTGTTTTATATCGGGGGACTCTGGCGGGTTCATGGGGAACG CCCCAACGTCCCGACATCGCCTTCAGCGTGACTAAAGCTGCGCTCGCGACAATGGCTGGTCTTGCGCTGGGAGAAGGGCT GATCCCCGCGCTCGACAGTCGTGTCAGCGAGGTCGTGCCGCTTCAGGAATTTGCCGAAAATCCCAACAAGGACATTACCT GGCGGCACCTGCTTACTTTCACCAGCGAATGGCGGGGCAAGCTCTGGGGCATTCCCGACAGCATCGATTGGAACCGTGCC GTGCCGTCGCGGCCCGGCGCGCCGGCCAAGGGCAGTCACCGCCGCCTGCGCGATCCGGGCGAATATTGGGAGTTCAACGA TGTGCGCGTCAATGTGCTGGCGCTCGCGCTCACCCATCTTTGGCGGGAGCCGCTTCCGGACGTGTTCAAGCGTCAAGTGA TGGACCCCATCGGAGCGAGCGGGCAATGGCGATGGGGCGGCTATGACAACGCTTTCGCCGCGATTGGTGGCCGGCGTGTG CCGGTTGTGGCCGGCGGGGCCCATTGGGGCGGAGGCTTGGTTATTTCCGCCCTCGACCTCGCCCGGCTTGGATTGCTTTA TGTGCGGCGCGGCAGATGCGACGGCCAGGCGATATTTCCCACCTTGTGGCTGGACCTCGTATCGAGCCCAACGGCCCTCA ATCCGGATTTCGGCATGATGTGGTGGAACAATTTCCGTGGATCGATTGCCAGCCTGTCGCGCCGGGCCATCTGGTGCTCA GGTATCGCCAATCTGCTGCTGGTGGATCCCGACGAGGATCTGGTGCTGGTCATCCGCTGGCACGATGCGGCGCGCCGGAA CCGGATGATCGAGAAGATCGTTCAAGCCCTGGCCGCGGGATCTACGGCGCCGTGA
Upstream 100 bases:
>100_bases TGCTGGAATGGTGCAGCCGGCCGGAAGAACAGCGCGATGCGCAAGCCGACGAAACGGCCCCCCTGCACGTTGATCTTTTT GAGCCCCGCCCGTGACGCCG
Downstream 100 bases:
>100_bases AGGCGTCGGCGACATTCTTGGTGATTCTCGCCGCCGCTTCGATATCTTCGCTTGCAAGCCGAACGCTCGGGGCGGCTACG CTCAAGGCGCCCAGCACCTT
Product: beta-lactamase
Products: NA
Alternate protein names: Secreted Beta-Lactamase Family Protein; Beta-Lactamase Family
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTSPVKDLPIRKMAALDQAIAEISAWETSVPTDLKAFKLRENAETFAEGEHAAIIGPMPDRGPATGVVLYRGTLAGSWGT PQRPDIAFSVTKAALATMAGLALGEGLIPALDSRVSEVVPLQEFAENPNKDITWRHLLTFTSEWRGKLWGIPDSIDWNRA VPSRPGAPAKGSHRRLRDPGEYWEFNDVRVNVLALALTHLWREPLPDVFKRQVMDPIGASGQWRWGGYDNAFAAIGGRRV PVVAGGAHWGGGLVISALDLARLGLLYVRRGRCDGQAIFPTLWLDLVSSPTALNPDFGMMWWNNFRGSIASLSRRAIWCS GIANLLLVDPDEDLVLVIRWHDAARRNRMIEKIVQALAAGSTAP
Sequences:
>Translated_364_residues MTSPVKDLPIRKMAALDQAIAEISAWETSVPTDLKAFKLRENAETFAEGEHAAIIGPMPDRGPATGVVLYRGTLAGSWGT PQRPDIAFSVTKAALATMAGLALGEGLIPALDSRVSEVVPLQEFAENPNKDITWRHLLTFTSEWRGKLWGIPDSIDWNRA VPSRPGAPAKGSHRRLRDPGEYWEFNDVRVNVLALALTHLWREPLPDVFKRQVMDPIGASGQWRWGGYDNAFAAIGGRRV PVVAGGAHWGGGLVISALDLARLGLLYVRRGRCDGQAIFPTLWLDLVSSPTALNPDFGMMWWNNFRGSIASLSRRAIWCS GIANLLLVDPDEDLVLVIRWHDAARRNRMIEKIVQALAAGSTAP >Mature_363_residues TSPVKDLPIRKMAALDQAIAEISAWETSVPTDLKAFKLRENAETFAEGEHAAIIGPMPDRGPATGVVLYRGTLAGSWGTP QRPDIAFSVTKAALATMAGLALGEGLIPALDSRVSEVVPLQEFAENPNKDITWRHLLTFTSEWRGKLWGIPDSIDWNRAV PSRPGAPAKGSHRRLRDPGEYWEFNDVRVNVLALALTHLWREPLPDVFKRQVMDPIGASGQWRWGGYDNAFAAIGGRRVP VVAGGAHWGGGLVISALDLARLGLLYVRRGRCDGQAIFPTLWLDLVSSPTALNPDFGMMWWNNFRGSIASLSRRAIWCSG IANLLLVDPDEDLVLVIRWHDAARRNRMIEKIVQALAAGSTAP
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39919; Mature: 39788
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPVKDLPIRKMAALDQAIAEISAWETSVPTDLKAFKLRENAETFAEGEHAAIIGPMPD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHCCCCEEEECCCCC RGPATGVVLYRGTLAGSWGTPQRPDIAFSVTKAALATMAGLALGEGLIPALDSRVSEVVP CCCCCEEEEEECEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC LQEFAENPNKDITWRHLLTFTSEWRGKLWGIPDSIDWNRAVPSRPGAPAKGSHRRLRDPG HHHHHCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EYWEFNDVRVNVLALALTHLWREPLPDVFKRQVMDPIGASGQWRWGGYDNAFAAIGGRRV CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCC PVVAGGAHWGGGLVISALDLARLGLLYVRRGRCDGQAIFPTLWLDLVSSPTALNPDFGMM EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH WWNNFRGSIASLSRRAIWCSGIANLLLVDPDEDLVLVIRWHDAARRNRMIEKIVQALAAG HHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC STAP CCCC >Mature Secondary Structure TSPVKDLPIRKMAALDQAIAEISAWETSVPTDLKAFKLRENAETFAEGEHAAIIGPMPD CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHCCCCEEEECCCCC RGPATGVVLYRGTLAGSWGTPQRPDIAFSVTKAALATMAGLALGEGLIPALDSRVSEVVP CCCCCEEEEEECEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC LQEFAENPNKDITWRHLLTFTSEWRGKLWGIPDSIDWNRAVPSRPGAPAKGSHRRLRDPG HHHHHCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EYWEFNDVRVNVLALALTHLWREPLPDVFKRQVMDPIGASGQWRWGGYDNAFAAIGGRRV CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCC PVVAGGAHWGGGLVISALDLARLGLLYVRRGRCDGQAIFPTLWLDLVSSPTALNPDFGMM EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH WWNNFRGSIASLSRRAIWCSGIANLLLVDPDEDLVLVIRWHDAARRNRMIEKIVQALAAG HHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC STAP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA