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The map label for this gene is 110632771

Identifier: 110632771

GI number: 110632771

Start: 455539

End: 456396

Strand: Direct

Name: 110632771

Synonym: Meso_0410

Alternate gene names: NA

Gene position: 455539-456396 (Clockwise)

Preceding gene: 110632768

Following gene: 110632772

Centisome position: 10.32

GC content: 63.29

Gene sequence:

>858_bases
TTGGACCGCATTGCAGGAGCTATCGCGGCAAAGCGCCATCCGTTGACGCTCGCTCATCTGTCGATGATCGATGCCGATCC
GATTACGCTGGTGAAGGCAGCCGAGGCGGGCGGATTCGATGGCATCGGCCTGCGTGTGCTTCCGCCCAAGGGGACGGTGC
TTGCCGGCGAAATCGTGGGGCATCCCGCTGTCGTGACGGAGGTCCGGGGAATGCTCCGCGATTCCGGTTTGGCTCTCTAT
GACGCCGAATCCTTCAGCCTTCGTCCGGAGACCGACATTCGCGCCGATTATGAGCCGGCTCTGGCGACGGTTGCCGAACT
CGAAGGGCGGGCCGTTCTGACCTCCGTCGTGGACCCAGATCCGGCACGCGCCTTCGAAAAATACTGCGAATTGTGCGATC
TTGGCGCCATCTACGGCCTGAAGGTCGGGCTCGAATACATCTCTTTCCGCGATCTGCGCACATTGGCGGAGGCGCTCGCC
TACGTAGAGCGCTCTGGAAAGAGCAATGCGGGTGTCATTGTCGATGCGCTGCATCATAGCCGCGTGGGCGGCTCGCCCGA
CGAGCTTGCGACGGTAAACCCCGCATGCCTGGCTTATGCGCAGATATGCGATGCTGTTGCCGAAATCCCTGCCGGAAATG
ACGGATTGCTTGCCGAAGCGCGCACGGGCCGGCTGCTGCCGGGTGACGGAAGCCTGTGGCTCAAGGATTGGGTCATCGCC
CTTCCCCCGATGCTCCCCATAAGCGTGGAAGCCCCCGTTGCCGCGCTCGCCGGGATGACACCGGTCGAGCGGGGCCGCGT
CATAGGCGAGAAGGCGCGGGGCTTTCTCGCGGACTGTGACCAACCCGTGGCGTTTTGA

Upstream 100 bases:

>100_bases
ATATTTGACATATAGAGAATTATTGCTAAACATACGGCAATGTTGTTGCTCATGTAGCAAACATACGGACAAAGTGCCAG
GACGATTGGGAGGAATTGCA

Downstream 100 bases:

>100_bases
GCGGTTCGTCCGCCAACTGGAGAAGCTGCTATGAATCTCATCGACCTGAAGGGGCGAAAGGCGATTATCACCGGAGGATC
GGGTGGCATCGGGCTGGCCG

Product: xylose isomerase-like TIM barrel

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; AP Endonuclease Family; Xylose Isomerase-Like Protein; Sugar Phosphate Isomerase/ Epimerase; Sugar Phosphate Isomerases/Epimerase; Xylose Isomerase-Type TIM-Barrel Protein; Sugar Phosphate Isomerases/Epimerases

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDRIAGAIAAKRHPLTLAHLSMIDADPITLVKAAEAGGFDGIGLRVLPPKGTVLAGEIVGHPAVVTEVRGMLRDSGLALY
DAESFSLRPETDIRADYEPALATVAELEGRAVLTSVVDPDPARAFEKYCELCDLGAIYGLKVGLEYISFRDLRTLAEALA
YVERSGKSNAGVIVDALHHSRVGGSPDELATVNPACLAYAQICDAVAEIPAGNDGLLAEARTGRLLPGDGSLWLKDWVIA
LPPMLPISVEAPVAALAGMTPVERGRVIGEKARGFLADCDQPVAF

Sequences:

>Translated_285_residues
MDRIAGAIAAKRHPLTLAHLSMIDADPITLVKAAEAGGFDGIGLRVLPPKGTVLAGEIVGHPAVVTEVRGMLRDSGLALY
DAESFSLRPETDIRADYEPALATVAELEGRAVLTSVVDPDPARAFEKYCELCDLGAIYGLKVGLEYISFRDLRTLAEALA
YVERSGKSNAGVIVDALHHSRVGGSPDELATVNPACLAYAQICDAVAEIPAGNDGLLAEARTGRLLPGDGSLWLKDWVIA
LPPMLPISVEAPVAALAGMTPVERGRVIGEKARGFLADCDQPVAF
>Mature_285_residues
MDRIAGAIAAKRHPLTLAHLSMIDADPITLVKAAEAGGFDGIGLRVLPPKGTVLAGEIVGHPAVVTEVRGMLRDSGLALY
DAESFSLRPETDIRADYEPALATVAELEGRAVLTSVVDPDPARAFEKYCELCDLGAIYGLKVGLEYISFRDLRTLAEALA
YVERSGKSNAGVIVDALHHSRVGGSPDELATVNPACLAYAQICDAVAEIPAGNDGLLAEARTGRLLPGDGSLWLKDWVIA
LPPMLPISVEAPVAALAGMTPVERGRVIGEKARGFLADCDQPVAF

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29987; Mature: 29987

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIAGAIAAKRHPLTLAHLSMIDADPITLVKAAEAGGFDGIGLRVLPPKGTVLAGEIVG
CCCHHHHHHHCCCCCEEEHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEHHHCC
HPAVVTEVRGMLRDSGLALYDAESFSLRPETDIRADYEPALATVAELEGRAVLTSVVDPD
CCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCC
PARAFEKYCELCDLGAIYGLKVGLEYISFRDLRTLAEALAYVERSGKSNAGVIVDALHHS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHH
RVGGSPDELATVNPACLAYAQICDAVAEIPAGNDGLLAEARTGRLLPGDGSLWLKDWVIA
CCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
LPPMLPISVEAPVAALAGMTPVERGRVIGEKARGFLADCDQPVAF
CCCCCCEECCCCHHHHHCCCHHHHCCHHHHHHCCHHHCCCCCCCC
>Mature Secondary Structure
MDRIAGAIAAKRHPLTLAHLSMIDADPITLVKAAEAGGFDGIGLRVLPPKGTVLAGEIVG
CCCHHHHHHHCCCCCEEEHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEHHHCC
HPAVVTEVRGMLRDSGLALYDAESFSLRPETDIRADYEPALATVAELEGRAVLTSVVDPD
CCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCC
PARAFEKYCELCDLGAIYGLKVGLEYISFRDLRTLAEALAYVERSGKSNAGVIVDALHHS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHH
RVGGSPDELATVNPACLAYAQICDAVAEIPAGNDGLLAEARTGRLLPGDGSLWLKDWVIA
CCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
LPPMLPISVEAPVAALAGMTPVERGRVIGEKARGFLADCDQPVAF
CCCCCCEECCCCHHHHHCCCHHHHCCHHHHHHCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA