Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632726
Identifier: 110632726
GI number: 110632726
Start: 408166
End: 409521
Strand: Reverse
Name: 110632726
Synonym: Meso_0365
Alternate gene names: NA
Gene position: 409521-408166 (Counterclockwise)
Preceding gene: 110632740
Following gene: 110632725
Centisome position: 9.28
GC content: 63.05
Gene sequence:
>1356_bases ATGAGCGACGAGCGCGCGGAAGAGCTGAAGATCATAAAAAATGAGGAGCGCGCCGAATCTCCGCTTGGAGGGCTGTTGAC CGGAAGGGTTCTGGGCTTCCCCGCGCATCCGGGGCGTGCCAGCGCGCTCGGTGAAGTCCATGCGCGGCCGCACCCCTTGC TCGAAGCGCCGCGCCTCATCATCCAGCTCTCCTTCATGACAGAAGGCGATTTCGCCGGGGACCAGGCGGTTATCGCCGAA CTATCGCGGCGGCTTGGCGTTGTCCCGCCGGACACGCATGCAAGGCACCATGCGATGCGGTGGGGTCAGGGCACGCTGAG GTGGGAGCGGCACACCGAGTTCTCCAGTTATCAGTGGGACTGCCCGATCTCGCCGCGCAGCGGCAAACCGTTGCAGGAAT CGCCTTTCGGCAACGGCTTTAACCCTCCAGGGACGATTATTTCCGGAACGCGGGTGGAAATCCGCAAGTGGTCGCAGGCG ACCGAGAAGCTGATCGGCAGCTTCGACCCGACGAGCCTCGGCTACTCCATCGTAGAAGGCGGACGCGCCGCCGTGGCCAC GGACTTCCGGCAGGATGGAGACGGGCTAACGCGCATATTGATCCTGGAACGGGATCTGCCGCCGGCCCGCATCGGCGCGC TGACGCAGCGCCTGATCGATATCGAAACCTATCGAACGCTGGCCATGCTCGGCCTTCCACTCGCCCAATCGCTCTCTCCG CGCCTTCGGCGGATGGAGGACCGGCTCGCGATCCTGACCGATAAAATGCGCAATCGCGACAATCACAACAGCCAGGCACT GCTTTCGGAGCTTACCGAACTTGCCGCCGAGCTGGAGGCAGAAGCCGCAGCGAGCCTTTATCGCTTCGGCGCAAGCCGAG CCTATGACGGCATCGTTCAGGAGCGGTTGGAGATGCTGAATGAAGCGCCCGTTTCCGGATACGAAACCTGGGCCACCTTC CTGCAGCGCCGCCTGGCGCCAGCAATGCGCACCTGTCGATCAGTCGAGGAAAGGCAGGCCAACCTCTCGCGCAAGCTCAC GCGAGCGGCAACCCTCTTGCGAAGCTGGGTCGATGTGGAGATGGAAAAGCAGAACCGCGATCTGCTTGCCTCAATGAACC GCCGCGCGGAAATGCAGTTGCGCCTTCAACAAACGGTGGAAGGCCTGTCCGTCGCCGCGATCTCCTACTATGTGGTGGGC CTGATATCCTATCTGGTGAAGGGCGTGCACCTCTTTCCCGGCTTCTCCCCGGAGGCGATCACCGCCGCCGCAGTACCGGT CGCAGTGCTCGTGATGTGGCTGCTGGTGCGCCGAATCAGGCGCAGGCACGTTCAAGTGGACAGGCGCAGCGGATAA
Upstream 100 bases:
>100_bases CCAATGCAGGAACAACGATCTGCTTCAGATCAGCGCATTGCGCTTTCCGGGGCGACGGGAGCATACTTCCCCCGGATCTC TACGAGCAACAGAAGTTGTC
Downstream 100 bases:
>100_bases GCGTCAGCACGCCATAACTCGCTCGTTTTTTGAGCCTTGGGCGGATTGACTCAAGCGCCGCCATTTGCGGAGCGAAAAAT TAACTGGTAAATAGATTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSDERAEELKIIKNEERAESPLGGLLTGRVLGFPAHPGRASALGEVHARPHPLLEAPRLIIQLSFMTEGDFAGDQAVIAE LSRRLGVVPPDTHARHHAMRWGQGTLRWERHTEFSSYQWDCPISPRSGKPLQESPFGNGFNPPGTIISGTRVEIRKWSQA TEKLIGSFDPTSLGYSIVEGGRAAVATDFRQDGDGLTRILILERDLPPARIGALTQRLIDIETYRTLAMLGLPLAQSLSP RLRRMEDRLAILTDKMRNRDNHNSQALLSELTELAAELEAEAAASLYRFGASRAYDGIVQERLEMLNEAPVSGYETWATF LQRRLAPAMRTCRSVEERQANLSRKLTRAATLLRSWVDVEMEKQNRDLLASMNRRAEMQLRLQQTVEGLSVAAISYYVVG LISYLVKGVHLFPGFSPEAITAAAVPVAVLVMWLLVRRIRRRHVQVDRRSG
Sequences:
>Translated_451_residues MSDERAEELKIIKNEERAESPLGGLLTGRVLGFPAHPGRASALGEVHARPHPLLEAPRLIIQLSFMTEGDFAGDQAVIAE LSRRLGVVPPDTHARHHAMRWGQGTLRWERHTEFSSYQWDCPISPRSGKPLQESPFGNGFNPPGTIISGTRVEIRKWSQA TEKLIGSFDPTSLGYSIVEGGRAAVATDFRQDGDGLTRILILERDLPPARIGALTQRLIDIETYRTLAMLGLPLAQSLSP RLRRMEDRLAILTDKMRNRDNHNSQALLSELTELAAELEAEAAASLYRFGASRAYDGIVQERLEMLNEAPVSGYETWATF LQRRLAPAMRTCRSVEERQANLSRKLTRAATLLRSWVDVEMEKQNRDLLASMNRRAEMQLRLQQTVEGLSVAAISYYVVG LISYLVKGVHLFPGFSPEAITAAAVPVAVLVMWLLVRRIRRRHVQVDRRSG >Mature_450_residues SDERAEELKIIKNEERAESPLGGLLTGRVLGFPAHPGRASALGEVHARPHPLLEAPRLIIQLSFMTEGDFAGDQAVIAEL SRRLGVVPPDTHARHHAMRWGQGTLRWERHTEFSSYQWDCPISPRSGKPLQESPFGNGFNPPGTIISGTRVEIRKWSQAT EKLIGSFDPTSLGYSIVEGGRAAVATDFRQDGDGLTRILILERDLPPARIGALTQRLIDIETYRTLAMLGLPLAQSLSPR LRRMEDRLAILTDKMRNRDNHNSQALLSELTELAAELEAEAAASLYRFGASRAYDGIVQERLEMLNEAPVSGYETWATFL QRRLAPAMRTCRSVEERQANLSRKLTRAATLLRSWVDVEMEKQNRDLLASMNRRAEMQLRLQQTVEGLSVAAISYYVVGL ISYLVKGVHLFPGFSPEAITAAAVPVAVLVMWLLVRRIRRRHVQVDRRSG
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50452; Mature: 50320
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDERAEELKIIKNEERAESPLGGLLTGRVLGFPAHPGRASALGEVHARPHPLLEAPRLI CCCHHHHHHHHHCCHHHHCCCCCHHHHHHEECCCCCCCCHHHHHHHCCCCCCHHHCCCEE IQLSFMTEGDFAGDQAVIAELSRRLGVVPPDTHARHHAMRWGQGTLRWERHTEFSSYQWD EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEHHCCCCCCEEEC CPISPRSGKPLQESPFGNGFNPPGTIISGTRVEIRKWSQATEKLIGSFDPTSLGYSIVEG CCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHCHHHHCC GRAAVATDFRQDGDGLTRILILERDLPPARIGALTQRLIDIETYRTLAMLGLPLAQSLSP CCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCH RLRRMEDRLAILTDKMRNRDNHNSQALLSELTELAAELEAEAAASLYRFGASRAYDGIVQ HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ERLEMLNEAPVSGYETWATFLQRRLAPAMRTCRSVEERQANLSRKLTRAATLLRSWVDVE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEKQNRDLLASMNRRAEMQLRLQQTVEGLSVAAISYYVVGLISYLVKGVHLFPGFSPEAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TAAAVPVAVLVMWLLVRRIRRRHVQVDRRSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDERAEELKIIKNEERAESPLGGLLTGRVLGFPAHPGRASALGEVHARPHPLLEAPRLI CCHHHHHHHHHCCHHHHCCCCCHHHHHHEECCCCCCCCHHHHHHHCCCCCCHHHCCCEE IQLSFMTEGDFAGDQAVIAELSRRLGVVPPDTHARHHAMRWGQGTLRWERHTEFSSYQWD EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEHHCCCCCCEEEC CPISPRSGKPLQESPFGNGFNPPGTIISGTRVEIRKWSQATEKLIGSFDPTSLGYSIVEG CCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHCHHHHCC GRAAVATDFRQDGDGLTRILILERDLPPARIGALTQRLIDIETYRTLAMLGLPLAQSLSP CCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCH RLRRMEDRLAILTDKMRNRDNHNSQALLSELTELAAELEAEAAASLYRFGASRAYDGIVQ HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ERLEMLNEAPVSGYETWATFLQRRLAPAMRTCRSVEERQANLSRKLTRAATLLRSWVDVE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEKQNRDLLASMNRRAEMQLRLQQTVEGLSVAAISYYVVGLISYLVKGVHLFPGFSPEAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TAAAVPVAVLVMWLLVRRIRRRHVQVDRRSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA