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The map label for this gene is yqjF [H]

Identifier: 110632715

GI number: 110632715

Start: 396622

End: 397005

Strand: Reverse

Name: yqjF [H]

Synonym: Meso_0354

Alternate gene names: 110632715

Gene position: 397005-396622 (Counterclockwise)

Preceding gene: 110632716

Following gene: 110632714

Centisome position: 9.0

GC content: 63.02

Gene sequence:

>384_bases
ATGTCAGACAATGCACTTGCTCTTCTTGGCCGCATCCTGCTCGCGGTGATCTTCATCTTCTCCGGCTTTGGGAAGCTCAC
GGCAATCGCCGGCACCGCCGGTTATTTCGGGAGCCTTGGCCTCCCCCTTCCGACCGTCACCGCCATTGTGGTCGGGCTTA
TCGAGCTTCTCGGCGGCATTGCCGTCCTTGTCGGCTACAAGACCCGGATCGCGGCCCTTGTTCTGGCAGTGTTCACGACT
GCCGCCACCCTGGTGGCTCACATGAACCTGGGCGACCAGATGCAGCTCCTGATGGCATTGAAGAACCTCGCCATCATCGG
CGGGTTCCTGGCGCTTGCCTCGCGCGGGGCCGGGCGACTTTCGCTGGACGGACGCAGCGCCTGA

Upstream 100 bases:

>100_bases
ATCTCTCTGGAAACACAGTGTCAACGGCCAGGCGGTAGTCCCGGCCGCGTGTTGACCTTATCTAGCCGGTTCGCTTTCTC
GCTAACGGGTTAACACCATC

Downstream 100 bases:

>100_bases
AACGGGCAGATAATAAAAGAGGGAGGTCCGCCGCTTTACGGCGGGCCTCTTGTTATGCGGGCAACCAGGCGAAAAAACTC
ACATTTGGGTGAATAGGGCC

Product: DoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSDNALALLGRILLAVIFIFSGFGKLTAIAGTAGYFGSLGLPLPTVTAIVVGLIELLGGIAVLVGYKTRIAALVLAVFTT
AATLVAHMNLGDQMQLLMALKNLAIIGGFLALASRGAGRLSLDGRSA

Sequences:

>Translated_127_residues
MSDNALALLGRILLAVIFIFSGFGKLTAIAGTAGYFGSLGLPLPTVTAIVVGLIELLGGIAVLVGYKTRIAALVLAVFTT
AATLVAHMNLGDQMQLLMALKNLAIIGGFLALASRGAGRLSLDGRSA
>Mature_126_residues
SDNALALLGRILLAVIFIFSGFGKLTAIAGTAGYFGSLGLPLPTVTAIVVGLIELLGGIAVLVGYKTRIAALVLAVFTTA
ATLVAHMNLGDQMQLLMALKNLAIIGGFLALASRGAGRLSLDGRSA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=119, Percent_Identity=42.8571428571429, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI145693171, Length=125, Percent_Identity=35.2, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 12898; Mature: 12767

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNALALLGRILLAVIFIFSGFGKLTAIAGTAGYFGSLGLPLPTVTAIVVGLIELLGGI
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVLVGYKTRIAALVLAVFTTAATLVAHMNLGDQMQLLMALKNLAIIGGFLALASRGAGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLDGRSA
CCCCCCC
>Mature Secondary Structure 
SDNALALLGRILLAVIFIFSGFGKLTAIAGTAGYFGSLGLPLPTVTAIVVGLIELLGGI
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVLVGYKTRIAALVLAVFTTAATLVAHMNLGDQMQLLMALKNLAIIGGFLALASRGAGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLDGRSA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]