Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632709
Identifier: 110632709
GI number: 110632709
Start: 389334
End: 390014
Strand: Reverse
Name: 110632709
Synonym: Meso_0348
Alternate gene names: NA
Gene position: 390014-389334 (Counterclockwise)
Preceding gene: 110632712
Following gene: 110632708
Centisome position: 8.84
GC content: 61.82
Gene sequence:
>681_bases ATGAAACCCACGATCTTGGTCGTGTCCGCCGCGGCTTTGCTGACGGCTACCGCCGCTTTCGCCTGTAACATTCACGCCAC CCCTGTTGCCGCCACCCTCACCGACGATGCGGTGCGTATCGACGCCTCGTCCAAACCCATGCCCGGAGAGCCGAGCCTCG CCGAGATCCGCAAGGCCACGGAGCGCTTCCGCGATGTAAACATAGCTCTCGCAGAAGGTTACCTCCGCGACCCCGGCAAC ATGTGCGAGACCGCTGAAATGATGGGCCTGCCGAAGTCGCTTGGCGGCATGGGCATCCACTTTTTCCGCCCGGACCTGCT CGGCATCTCCGCCCCGCCCAACCCGCGCGTCGACGGCGTCGGGACGCACACGGATTTCGTCAATCCGGCGGTCCTCATTT ATGAGCCGCAGGCTGACGGCTCGCTCGAACTCGTCGCGGTCGAGAATCTCGTTTTCGCCAAGGCTTGGAGCGAGGCAGGC AATGACGGCCCGCCATCGTTCCACGGACTGCCATACGACACCATGATCGACGATCCAGCGACGGCCATCGACGAGGCACA TAATTTCGAGCCTCATCATGACCGGCATGTCTGGCTTTACCGCGAAAACCCGAATGGCATCTTCGCCCAGTTCAATCCGC GTGTGACGTGCGAGCACCATGAGATCAAGCACAGTCACTGA
Upstream 100 bases:
>100_bases CGTACGCGACCGCCCTGGATTATTTCACCAGCCATCGACGCCGGGCGTCACGAAACAGCCGCGGCGTACGATTTTCCAGA CCGAACAGAGGATCAGAACG
Downstream 100 bases:
>100_bases GCCGCATTCCCGCGAGCCGCGAAAAAGGAGGACAGCAACATGCATATCGATGAATTGAGAAAGGCGGTTCGCGGGGCGGT GACGACCCGTGAAAGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKPTILVVSAAALLTATAAFACNIHATPVAATLTDDAVRIDASSKPMPGEPSLAEIRKATERFRDVNIALAEGYLRDPGN MCETAEMMGLPKSLGGMGIHFFRPDLLGISAPPNPRVDGVGTHTDFVNPAVLIYEPQADGSLELVAVENLVFAKAWSEAG NDGPPSFHGLPYDTMIDDPATAIDEAHNFEPHHDRHVWLYRENPNGIFAQFNPRVTCEHHEIKHSH
Sequences:
>Translated_226_residues MKPTILVVSAAALLTATAAFACNIHATPVAATLTDDAVRIDASSKPMPGEPSLAEIRKATERFRDVNIALAEGYLRDPGN MCETAEMMGLPKSLGGMGIHFFRPDLLGISAPPNPRVDGVGTHTDFVNPAVLIYEPQADGSLELVAVENLVFAKAWSEAG NDGPPSFHGLPYDTMIDDPATAIDEAHNFEPHHDRHVWLYRENPNGIFAQFNPRVTCEHHEIKHSH >Mature_226_residues MKPTILVVSAAALLTATAAFACNIHATPVAATLTDDAVRIDASSKPMPGEPSLAEIRKATERFRDVNIALAEGYLRDPGN MCETAEMMGLPKSLGGMGIHFFRPDLLGISAPPNPRVDGVGTHTDFVNPAVLIYEPQADGSLELVAVENLVFAKAWSEAG NDGPPSFHGLPYDTMIDDPATAIDEAHNFEPHHDRHVWLYRENPNGIFAQFNPRVTCEHHEIKHSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24537; Mature: 24537
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTILVVSAAALLTATAAFACNIHATPVAATLTDDAVRIDASSKPMPGEPSLAEIRKAT CCCEEEEEEHHHHHHHHHHEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHH ERFRDVNIALAEGYLRDPGNMCETAEMMGLPKSLGGMGIHFFRPDLLGISAPPNPRVDGV HHHHCCEEEEECCEECCCCCHHHHHHHHCCCCHHCCCEEEEECCCEEECCCCCCCCCCCC GTHTDFVNPAVLIYEPQADGSLELVAVENLVFAKAWSEAGNDGPPSFHGLPYDTMIDDPA CCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHCCCCCH TAIDEAHNFEPHHDRHVWLYRENPNGIFAQFNPRVTCEHHEIKHSH HHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCEEECCCCCCCCC >Mature Secondary Structure MKPTILVVSAAALLTATAAFACNIHATPVAATLTDDAVRIDASSKPMPGEPSLAEIRKAT CCCEEEEEEHHHHHHHHHHEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHH ERFRDVNIALAEGYLRDPGNMCETAEMMGLPKSLGGMGIHFFRPDLLGISAPPNPRVDGV HHHHCCEEEEECCEECCCCCHHHHHHHHCCCCHHCCCEEEEECCCEEECCCCCCCCCCCC GTHTDFVNPAVLIYEPQADGSLELVAVENLVFAKAWSEAGNDGPPSFHGLPYDTMIDDPA CCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHCCCCCH TAIDEAHNFEPHHDRHVWLYRENPNGIFAQFNPRVTCEHHEIKHSH HHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA