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The map label for this gene is yiaO [C]

Identifier: 110632707

GI number: 110632707

Start: 386402

End: 387544

Strand: Reverse

Name: yiaO [C]

Synonym: Meso_0346

Alternate gene names: 110632707

Gene position: 387544-386402 (Counterclockwise)

Preceding gene: 110632708

Following gene: 110632706

Centisome position: 8.78

GC content: 60.45

Gene sequence:

>1143_bases
ATGACCAACTCCATAGAGTTTCATTCCGCTCCGACACCCCGTCGGACGTTCCTCAAGGGTAGCCTGCTCGCCGCTGGAGG
TGCTGCGGTAAGCCTTGCTGCACCTGCGGTACGGGCGCAGAGCCCGGTTGTCGTAAAGATGCAGACATCCTGGCCTTCCG
GCGACATCTGGATGGATTTCGCCCGCCAATATGTCGAGCGCGTCCACGAGATGTCGAACGGACGAATCCAGATCGACCTT
CTGCCGGCAGGCGCAGTGGTCGGCGCGTTCCAGGTGCTCGACGCCGTCAATGACGGGGTGCTCGACGCAGCCCATACGGT
GCCTGTCTACTGGTACGGCAAACATAAAGCAGCATCGCTTTTCGGCACGGGCCCGGTTTGGGGCGGCAGCGCACTCAACA
TGCTCGGCTGGTTCTACCAAGGTGGCGGCAAGGAGCTCTATGCCGAGCTCACCCAGGAGATCATGGGCCTCAACATCTAT
GGCTTCTATGGTTTCCCGATGCCGGCTCAGCCCTTCGGCTGGTTCAAGAACCCGGTCACCACGGTGCAGGACCTGCAGGG
CTTCAAATACCGGACGGTGGGGCTTGCCGCCGACCTGATGCAGAAGCTCGGCATGAGCGTCGCCCAGCTTCCCGGCGGCG
AAATCGTCCCGGCCATGGAGCGCGGGGTGATCGACGCGTTCGAATTCAACAACCCATCCTCCGACCTGCGCTTCGGCGCG
CAGGATGTGGCGAAGAACTATTTCCTGGCCTCCTATCACCAAGCTTCCGAGTCCTTCGAGTTCCTGTTCAACAAGGACTT
CTTCGACGATCTGGATCCGGACTTGCAGGCGATCCTCAAATACGGGGTCGAGGCGATCACCTCGGCGAATACCGCGCTTG
CCCTCGATCAATACTCGAAGGACCTGCAGGCGCTGCAGGATGAGCATGGGGTCACGGTACACCGCACTTCGCAGGAGATC
CTGGATGCTCAGCTCAAGGCCTGGGACGAGCTCATTCCCGAGCTGGAGCAGGACGACTTCATGAAGCGATGCATGGATAG
CCAGCGCCAGTGGGTCGAGCGCACCGTGTTCTACGAGTTAATGAGCGCACCCGACCTCACGCTTGCCTACGAGCATTATT
TCCCAGGCAAGCTGAAGACCTGA

Upstream 100 bases:

>100_bases
GAGGTCCCATCGGCGGAGGGTCGGCTGGGGTTCCCTGCCCGACTGTCGGCGGATGTTGGCCGTGCACCAGCATCGCAAGA
CTTGAATGGGAGGAAAATTG

Downstream 100 bases:

>100_bases
CGCCGTTCCGGACGCGCCCGTGTTCCGTCACCCCCTGCGGTGGCGAGAGCGCGGGCGGACGCCCGCAACAACTGGCGCAA
AGCAGTTCGCAATCCTGCGC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; Trap Dicarboxylate Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP Dicarboxylate Transporter-DctP Subunit; TRAP Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Family Transporter DctP Subunit; TRAP Dicarboxylate Transporter DctP Subunit; Trap-T Transport System Periplasmic Component; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; C4-Dicarboxylate Transporter; TRAP Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTNSIEFHSAPTPRRTFLKGSLLAAGGAAVSLAAPAVRAQSPVVVKMQTSWPSGDIWMDFARQYVERVHEMSNGRIQIDL
LPAGAVVGAFQVLDAVNDGVLDAAHTVPVYWYGKHKAASLFGTGPVWGGSALNMLGWFYQGGGKELYAELTQEIMGLNIY
GFYGFPMPAQPFGWFKNPVTTVQDLQGFKYRTVGLAADLMQKLGMSVAQLPGGEIVPAMERGVIDAFEFNNPSSDLRFGA
QDVAKNYFLASYHQASESFEFLFNKDFFDDLDPDLQAILKYGVEAITSANTALALDQYSKDLQALQDEHGVTVHRTSQEI
LDAQLKAWDELIPELEQDDFMKRCMDSQRQWVERTVFYELMSAPDLTLAYEHYFPGKLKT

Sequences:

>Translated_380_residues
MTNSIEFHSAPTPRRTFLKGSLLAAGGAAVSLAAPAVRAQSPVVVKMQTSWPSGDIWMDFARQYVERVHEMSNGRIQIDL
LPAGAVVGAFQVLDAVNDGVLDAAHTVPVYWYGKHKAASLFGTGPVWGGSALNMLGWFYQGGGKELYAELTQEIMGLNIY
GFYGFPMPAQPFGWFKNPVTTVQDLQGFKYRTVGLAADLMQKLGMSVAQLPGGEIVPAMERGVIDAFEFNNPSSDLRFGA
QDVAKNYFLASYHQASESFEFLFNKDFFDDLDPDLQAILKYGVEAITSANTALALDQYSKDLQALQDEHGVTVHRTSQEI
LDAQLKAWDELIPELEQDDFMKRCMDSQRQWVERTVFYELMSAPDLTLAYEHYFPGKLKT
>Mature_379_residues
TNSIEFHSAPTPRRTFLKGSLLAAGGAAVSLAAPAVRAQSPVVVKMQTSWPSGDIWMDFARQYVERVHEMSNGRIQIDLL
PAGAVVGAFQVLDAVNDGVLDAAHTVPVYWYGKHKAASLFGTGPVWGGSALNMLGWFYQGGGKELYAELTQEIMGLNIYG
FYGFPMPAQPFGWFKNPVTTVQDLQGFKYRTVGLAADLMQKLGMSVAQLPGGEIVPAMERGVIDAFEFNNPSSDLRFGAQ
DVAKNYFLASYHQASESFEFLFNKDFFDDLDPDLQAILKYGVEAITSANTALALDQYSKDLQALQDEHGVTVHRTSQEIL
DAQLKAWDELIPELEQDDFMKRCMDSQRQWVERTVFYELMSAPDLTLAYEHYFPGKLKT

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42215; Mature: 42084

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSIEFHSAPTPRRTFLKGSLLAAGGAAVSLAAPAVRAQSPVVVKMQTSWPSGDIWMDF
CCCCCCCCCCCCCHHHHHCCCCEECCCCHHHHHCCHHCCCCCEEEEEECCCCCCCHHHHH
ARQYVERVHEMSNGRIQIDLLPAGAVVGAFQVLDAVNDGVLDAAHTVPVYWYGKHKAASL
HHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCEEEE
FGTGPVWGGSALNMLGWFYQGGGKELYAELTQEIMGLNIYGFYGFPMPAQPFGWFKNPVT
ECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCH
TVQDLQGFKYRTVGLAADLMQKLGMSVAQLPGGEIVPAMERGVIDAFEFNNPSSDLRFGA
HHHHHCCCEEEHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEECCCCCHHHHCCH
QDVAKNYFLASYHQASESFEFLFNKDFFDDLDPDLQAILKYGVEAITSANTALALDQYSK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DLQALQDEHGVTVHRTSQEILDAQLKAWDELIPELEQDDFMKRCMDSQRQWVERTVFYEL
HHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSAPDLTLAYEHYFPGKLKT
HCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
TNSIEFHSAPTPRRTFLKGSLLAAGGAAVSLAAPAVRAQSPVVVKMQTSWPSGDIWMDF
CCCCCCCCCCCCHHHHHCCCCEECCCCHHHHHCCHHCCCCCEEEEEECCCCCCCHHHHH
ARQYVERVHEMSNGRIQIDLLPAGAVVGAFQVLDAVNDGVLDAAHTVPVYWYGKHKAASL
HHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCEEEE
FGTGPVWGGSALNMLGWFYQGGGKELYAELTQEIMGLNIYGFYGFPMPAQPFGWFKNPVT
ECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCH
TVQDLQGFKYRTVGLAADLMQKLGMSVAQLPGGEIVPAMERGVIDAFEFNNPSSDLRFGA
HHHHHCCCEEEHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEECCCCCHHHHCCH
QDVAKNYFLASYHQASESFEFLFNKDFFDDLDPDLQAILKYGVEAITSANTALALDQYSK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DLQALQDEHGVTVHRTSQEILDAQLKAWDELIPELEQDDFMKRCMDSQRQWVERTVFYEL
HHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSAPDLTLAYEHYFPGKLKT
HCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA