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The map label for this gene is 110632706

Identifier: 110632706

GI number: 110632706

Start: 385637

End: 386251

Strand: Reverse

Name: 110632706

Synonym: Meso_0345

Alternate gene names: NA

Gene position: 386251-385637 (Counterclockwise)

Preceding gene: 110632707

Following gene: 110632705

Centisome position: 8.75

GC content: 60.0

Gene sequence:

>615_bases
ATGACGAATCTTATCCACTTCATTGACCGCATCACGGGCTGGTTCGGCCGCGCCTTCGCGTGGCTGATCCTGATGATGGC
CTTCGGCATGGGCTATGAGGTTGCGGTTCGCTATCTCTTCAACGCGCCCACCGCCTGGGCTTTCGACATGTCATACATGC
TCTACGGCACCCTTTTCATGATGGGTGGCGCCTACACGCTTTCGCGCAACGCCCATGTGCGCGGAGACTTCCTCTACCGC
CTCTGGCGGCCGAGAACCCAGGCGACCGTCGAGCTGGTTCTCTACTTTCTTTTTTTCTTTCCCGGCGTTCTGGCGCTCGT
CTTCGCCGGCTGGAAATATGCGGGGCGCGGCTGGCGCTATCTCGAAGTCAGCACCAACTCGCCGGCCGGCATCCCGATCT
TCCATTTCAAGACGGTGATCGTCGCCGCCGGCATTCTCCTGTTCATCCAGGGCATCGCACAGGTCTGCCGGTGCATCTTA
TGCATCCGCACGGGCGAATGGCTTCCGCACGAGGAGGACGCAGTGGAATTGGAAGATCAGCTCATAAGGCAGGTGGCGGC
GGGCCACGGCGAAGATGCCGCTATGATCGCCGCGGGAAGGAAGCCAGAAAAATGA

Upstream 100 bases:

>100_bases
GCGGGCGGACGCCCGCAACAACTGGCGCAAAGCAGTTCGCAATCCTGCGCATGGCGACCGCGCCAGCCATCAACCCGCCT
TTGGTGAGTGACATCTCACG

Downstream 100 bases:

>100_bases
CCGACCCGCAGATCGCTATCATGATGCTCGGGATCTTCATCCTCTGCATCTTCCTCGGCTTCCCCATCGCCTTCACGCTG
ATGGCCCTAGGTGTGGGCTT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ Family Protein; Transporter DctQ Related Transmembrane Protein; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease; Small Integral Membrane Tranport Protein; Trap Transporter Dctq Family; TRAP Dicarboxylate Transporter Subunit DctQ; TRAP-Type Transporter Small Permease Component; Trap-Type Transport System Small Permease Component; Tripartite Transporter Small Subunit; TRAP-Type Large Permease Component; TRAP-T Family Tripartite Transporter; Transporter DctQ-Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; TRAP-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter DctQ Subunit; Permease Protein; Tripartite ATP-Independent Periplasmic; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTNLIHFIDRITGWFGRAFAWLILMMAFGMGYEVAVRYLFNAPTAWAFDMSYMLYGTLFMMGGAYTLSRNAHVRGDFLYR
LWRPRTQATVELVLYFLFFFPGVLALVFAGWKYAGRGWRYLEVSTNSPAGIPIFHFKTVIVAAGILLFIQGIAQVCRCIL
CIRTGEWLPHEEDAVELEDQLIRQVAAGHGEDAAMIAAGRKPEK

Sequences:

>Translated_204_residues
MTNLIHFIDRITGWFGRAFAWLILMMAFGMGYEVAVRYLFNAPTAWAFDMSYMLYGTLFMMGGAYTLSRNAHVRGDFLYR
LWRPRTQATVELVLYFLFFFPGVLALVFAGWKYAGRGWRYLEVSTNSPAGIPIFHFKTVIVAAGILLFIQGIAQVCRCIL
CIRTGEWLPHEEDAVELEDQLIRQVAAGHGEDAAMIAAGRKPEK
>Mature_203_residues
TNLIHFIDRITGWFGRAFAWLILMMAFGMGYEVAVRYLFNAPTAWAFDMSYMLYGTLFMMGGAYTLSRNAHVRGDFLYRL
WRPRTQATVELVLYFLFFFPGVLALVFAGWKYAGRGWRYLEVSTNSPAGIPIFHFKTVIVAAGILLFIQGIAQVCRCILC
IRTGEWLPHEEDAVELEDQLIRQVAAGHGEDAAMIAAGRKPEK

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23178; Mature: 23046

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLIHFIDRITGWFGRAFAWLILMMAFGMGYEVAVRYLFNAPTAWAFDMSYMLYGTLFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MGGAYTLSRNAHVRGDFLYRLWRPRTQATVELVLYFLFFFPGVLALVFAGWKYAGRGWRY
HCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEE
LEVSTNSPAGIPIFHFKTVIVAAGILLFIQGIAQVCRCILCIRTGEWLPHEEDAVELEDQ
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LIRQVAAGHGEDAAMIAAGRKPEK
HHHHHHCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
TNLIHFIDRITGWFGRAFAWLILMMAFGMGYEVAVRYLFNAPTAWAFDMSYMLYGTLFM
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MGGAYTLSRNAHVRGDFLYRLWRPRTQATVELVLYFLFFFPGVLALVFAGWKYAGRGWRY
HCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEE
LEVSTNSPAGIPIFHFKTVIVAAGILLFIQGIAQVCRCILCIRTGEWLPHEEDAVELEDQ
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LIRQVAAGHGEDAAMIAAGRKPEK
HHHHHHCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA