Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is pucI [H]
Identifier: 110632696
GI number: 110632696
Start: 371352
End: 372803
Strand: Direct
Name: pucI [H]
Synonym: Meso_0335
Alternate gene names: 110632696
Gene position: 371352-372803 (Clockwise)
Preceding gene: 110632695
Following gene: 110632701
Centisome position: 8.42
GC content: 57.64
Gene sequence:
>1452_bases ATGGCAATTTCATCCGGCAAGCACGCCCAGGATGGCGCGCTTTATAATACGGACTTGGCCCCGCTGCCGCCGGAGAGGCG CAAATGGGGCGCTTTTGAAATCTTCAACGTATGGAATAACGATATACAGAGCCTATTCGGCTATTCGTTAGCCGCCTCGC TCTTCATTACATACGGGCTCAATGGCTGGGCGGTCTTCGCCGCGATCATCGTCGCCGGCTTTTTTGTGATGTTCCTGGTC AACCTCACCGGCAAACCATCGGTCAAGTATGGGGTCCCTTACCCCGTCATGGCCAGGGCCAGCATGGGGGTCTATGGTGC GCGCTTTCCGGCCCTGATCCGCGGCATTGTCGCGATTTTCTGGTACGGCGTGCAGACCTATTTCGCCTCGACCGCAGTAG CACTGCTGTTGAATACCATGCTCGGCATCCGAGGCGGGGCCGAATTCCTGGGCCTGACGGCCGTAGGCTGGCTCTCCTAT TTCATCGTCTGCGCGTTCCAGGTCATGCTTTTCGCGCGCGGCATCGACTGGGTCGGAAAGTTTCTGAACTGGGCCGGTCC CACCGTCTATGCGGTGATGATCGCTCTTTGTCTCGTCATCTGGTGGAAAGCGGGCAACGGCATCTTCAGCGAGCTCGGCG CGATCTTCGAGGGCGGTGAGGCATCCGATCAGCGGGGCTCGGTGGCCGCGTTTTTCGCTATCGTGGGAACGATGATCGCC TATTTCGCGGCGGTCGTGATAAATTTCGGAGACTTCTCGCGTTTCGTCAAAACCGAGTCGGCGATGAAGATCGGCAATTT CTGGGGCCTGCCGATCTCCCTGGCGTTCTTTTCCTTCATCGCGCTCTTCGTTACGGCCGGCACCGTGGTGTTGTTCGGCG AGAGGCTCATCAATCCCGCCGATATCGTCGACCGTGTCGATAATGTGCTGCTTACGCTCATTGCCGCCCTTACATTTTTC GCGGCGACCGTCGGTATCAACCTCGTTGCCAACTTCATTCCTCCGGCCTACGACATCGCCAATCTCAATCCGGAGAAAAT TTCCGCGAAGATGGGCGGCGTTATCACGGCAATCGTCGCATTCTTCATCGGCGCGCTCTGGGTGCCGGTGATCTCCACTA TCGGCATCACCGCCTTCGTCGACACGCTTGGAGCATTCCTTGCGCCGCTTTACGGCATTCTCGTCGCCGACTACTACATC GTTCGTCGCAAGAATATTTCCGTAGACGATTTGTTCTCGTCCGATCCTTCAGGGCCTTATTTCTACACCGGTGGCTGGAA CCAGAAGGCTATCATCGCCTTCGCTATTCCGGCCGTCTTTTCGGTGGCCACGGTATGGATCCCCGCACTTTCGCAGCTGT CGGGTTACGGCTGGGTGATCGGCGCGATACTGGGTGGTGCTGTGCATGTCGGCCTGATGCACAGCAAAATGCCGGCTCCG AGAACGATCTGA
Upstream 100 bases:
>100_bases CGGCGTAACCTCTCGGGAAAAATAATAAAAACGCCAGCAATGGTTTTTGTGTCTGTCGTACCATTGCGGTGTCCTGAGGG CTCAACAATGGGAGAGGGTG
Downstream 100 bases:
>100_bases TCGGCTCTGGTTAAGCCGAGCTATTCTCCCGGCGGTGGCGATCGTGCGCCACCGCTTCGCGATGGCGGCGGGCGGATAAC TGGGCTCGCCGCTTTTGCTC
Product: permease for cytosine/purines, uracil, thiamine, allantoin
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MAISSGKHAQDGALYNTDLAPLPPERRKWGAFEIFNVWNNDIQSLFGYSLAASLFITYGLNGWAVFAAIIVAGFFVMFLV NLTGKPSVKYGVPYPVMARASMGVYGARFPALIRGIVAIFWYGVQTYFASTAVALLLNTMLGIRGGAEFLGLTAVGWLSY FIVCAFQVMLFARGIDWVGKFLNWAGPTVYAVMIALCLVIWWKAGNGIFSELGAIFEGGEASDQRGSVAAFFAIVGTMIA YFAAVVINFGDFSRFVKTESAMKIGNFWGLPISLAFFSFIALFVTAGTVVLFGERLINPADIVDRVDNVLLTLIAALTFF AATVGINLVANFIPPAYDIANLNPEKISAKMGGVITAIVAFFIGALWVPVISTIGITAFVDTLGAFLAPLYGILVADYYI VRRKNISVDDLFSSDPSGPYFYTGGWNQKAIIAFAIPAVFSVATVWIPALSQLSGYGWVIGAILGGAVHVGLMHSKMPAP RTI
Sequences:
>Translated_483_residues MAISSGKHAQDGALYNTDLAPLPPERRKWGAFEIFNVWNNDIQSLFGYSLAASLFITYGLNGWAVFAAIIVAGFFVMFLV NLTGKPSVKYGVPYPVMARASMGVYGARFPALIRGIVAIFWYGVQTYFASTAVALLLNTMLGIRGGAEFLGLTAVGWLSY FIVCAFQVMLFARGIDWVGKFLNWAGPTVYAVMIALCLVIWWKAGNGIFSELGAIFEGGEASDQRGSVAAFFAIVGTMIA YFAAVVINFGDFSRFVKTESAMKIGNFWGLPISLAFFSFIALFVTAGTVVLFGERLINPADIVDRVDNVLLTLIAALTFF AATVGINLVANFIPPAYDIANLNPEKISAKMGGVITAIVAFFIGALWVPVISTIGITAFVDTLGAFLAPLYGILVADYYI VRRKNISVDDLFSSDPSGPYFYTGGWNQKAIIAFAIPAVFSVATVWIPALSQLSGYGWVIGAILGGAVHVGLMHSKMPAP RTI >Mature_482_residues AISSGKHAQDGALYNTDLAPLPPERRKWGAFEIFNVWNNDIQSLFGYSLAASLFITYGLNGWAVFAAIIVAGFFVMFLVN LTGKPSVKYGVPYPVMARASMGVYGARFPALIRGIVAIFWYGVQTYFASTAVALLLNTMLGIRGGAEFLGLTAVGWLSYF IVCAFQVMLFARGIDWVGKFLNWAGPTVYAVMIALCLVIWWKAGNGIFSELGAIFEGGEASDQRGSVAAFFAIVGTMIAY FAAVVINFGDFSRFVKTESAMKIGNFWGLPISLAFFSFIALFVTAGTVVLFGERLINPADIVDRVDNVLLTLIAALTFFA ATVGINLVANFIPPAYDIANLNPEKISAKMGGVITAIVAFFIGALWVPVISTIGITAFVDTLGAFLAPLYGILVADYYIV RRKNISVDDLFSSDPSGPYFYTGGWNQKAIIAFAIPAVFSVATVWIPALSQLSGYGWVIGAILGGAVHVGLMHSKMPAPR TI
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=473, Percent_Identity=28.7526427061311, Blast_Score=180, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319495, Length=445, Percent_Identity=25.1685393258427, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6322219, Length=444, Percent_Identity=25.6756756756757, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6319429, Length=442, Percent_Identity=26.2443438914027, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6324766, Length=442, Percent_Identity=21.9457013574661, Blast_Score=77, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6323266, Length=440, Percent_Identity=20.2272727272727, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 51986; Mature: 51854
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISSGKHAQDGALYNTDLAPLPPERRKWGAFEIFNVWNNDIQSLFGYSLAASLFITYGL CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGWAVFAAIIVAGFFVMFLVNLTGKPSVKYGVPYPVMARASMGVYGARFPALIRGIVAIF CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH WYGVQTYFASTAVALLLNTMLGIRGGAEFLGLTAVGWLSYFIVCAFQVMLFARGIDWVGK HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH FLNWAGPTVYAVMIALCLVIWWKAGNGIFSELGAIFEGGEASDQRGSVAAFFAIVGTMIA HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH YFAAVVINFGDFSRFVKTESAMKIGNFWGLPISLAFFSFIALFVTAGTVVLFGERLINPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DIVDRVDNVLLTLIAALTFFAATVGINLVANFIPPAYDIANLNPEKISAKMGGVITAIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHH FFIGALWVPVISTIGITAFVDTLGAFLAPLYGILVADYYIVRRKNISVDDLFSSDPSGPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCE FYTGGWNQKAIIAFAIPAVFSVATVWIPALSQLSGYGWVIGAILGGAVHVGLMHSKMPAP EEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC RTI CCC >Mature Secondary Structure AISSGKHAQDGALYNTDLAPLPPERRKWGAFEIFNVWNNDIQSLFGYSLAASLFITYGL CCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGWAVFAAIIVAGFFVMFLVNLTGKPSVKYGVPYPVMARASMGVYGARFPALIRGIVAIF CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH WYGVQTYFASTAVALLLNTMLGIRGGAEFLGLTAVGWLSYFIVCAFQVMLFARGIDWVGK HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH FLNWAGPTVYAVMIALCLVIWWKAGNGIFSELGAIFEGGEASDQRGSVAAFFAIVGTMIA HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH YFAAVVINFGDFSRFVKTESAMKIGNFWGLPISLAFFSFIALFVTAGTVVLFGERLINPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DIVDRVDNVLLTLIAALTFFAATVGINLVANFIPPAYDIANLNPEKISAKMGGVITAIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHH FFIGALWVPVISTIGITAFVDTLGAFLAPLYGILVADYYIVRRKNISVDDLFSSDPSGPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCE FYTGGWNQKAIIAFAIPAVFSVATVWIPALSQLSGYGWVIGAILGGAVHVGLMHSKMPAP EEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC RTI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]