Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is luxQ [H]
Identifier: 110632701
GI number: 110632701
Start: 378872
End: 381322
Strand: Direct
Name: luxQ [H]
Synonym: Meso_0340
Alternate gene names: 110632701
Gene position: 378872-381322 (Clockwise)
Preceding gene: 110632696
Following gene: 110632703
Centisome position: 8.59
GC content: 62.87
Gene sequence:
>2451_bases GTGACCACGTTGGAAGCCGCAGAGGCGAAGAGTTTGCCGCGCCATGATCGGCTCGGTGTGCGCGCGCGGCTGTTGCTCGC CTTCTTTGCAATCGCAGCCTTCGCGGTTTTAGCCGCCGCGGCGGGAATGTACGCTTTCCGCGAGGTCGGCTCACGACTTG AGGTCATCGATACGCGTGTCCCGCCCACACTCTCGGCGCTCGAACTCTCGCGCTCGGCCGAGCGCATCATCGCCGCGGCG CCAGCTCTACTTTCGGCAAGCGGGCGGGCGCAGCGAGACGAAGTGAAAGCCGAGCTCGCAGCCGAGGTCGGGCGTTTGAA CGCGACGCTCGCCCGGCTGAAGCGCGATAGCGCGGGACTGCCGCTGCTTTCGGAAGTCGAGAGGACCGTTTCCTCCCTGG CCGCCAATCTGGCGGCTCTCGATGAGCTGGTTGCCCGCCGGCTCGTGATAAACGAGCGCATAGGGCTTTTGAGAAGCCGG GTTTTCCAGATCGAGGGAGAAACGCAGAGATTGCTCGCACCTTGGCTGGAGGTCGTGGGCAGGGAATCCGCGATGCTGGT CGAGGCAGGCAAGGGCGATCCGACAAGCCAGGCCGGCGGCCCTGAACGGCTCTCGTTCTTGATCGAGTTGCAGCGGCTGA TGCGAACTGCGCAGGCGCGCGCATCCGCTGCCGCCGACATGCTCATCGAAGCCTCCACCACAAATGAGCCAGCCCGGCTG CCGGTGCTCGAATTCCAGCTCGGACTTGCTTTCGATGATCTCGCCGAGATCTCCAAACAGTTCGATCCCAGGCTGCGGCC GCTCTTTCTGGAAGAAATAGCGAAACTGCGCGGACTCGCCCAGGGAGATGAAGCGATCGCCCAGGCTCGCAGCGAGGAAC TCATGCTTGTCGAACAGGGCGAGGACCTGCTCGCCGAGACCGCCAGGCTATCCTCGCAGCTTGGTGCTGCGATTGACCGG CTCGGCGATGCGGCCAAGGCAGACATCGGTATGGCGATCCAGGATGCGCTCCTGGTGCAGAGGCAAAGCGCCAGCGCCCT CGTCCTTCTGGTAGCGCTGAGCCTACTGACCTCGGTGCTGATCGTATGGCTCTATGTGGGAAAAAACATTGTACGCCGCC TTACCGCGCTAAGTGACGGCATGCTCGCCATCATCCGCGGCAGGCTCGAGACACCTGTAGTCGCGGAGGGGAGTGACGAA ATCGCGGCTATGGCCCGAGCAGTCGAGGTCTTCCGTCAGAACACGCTGGAGCGCGACAAGCTGCTGTCCGAGAAAGCGCG AGCGGCCGATCTCCTCGAGCAGGAAGTAAGGCAACGCACGGCCGAACTGGAGACGGCCAACACGTTCAAGTCGCGCTTTC TCGCCGCCGCAAGCCATGATCTGCGCCAGCCCCTCCACGCGCTGAACCTTTTCATCGCCCAACTGCGCAATGAGGCTGAC CCGGTCGAGCGCGCGAGATTGGTCGGTCGTATCGATGTCGCGGTGGGATCGGTCAACGAGCTCCTCGAAGCTCTGCTCGA CATGTCGAAACTGGAGGCAGGCGTGCTTGAGCCGGAGTTCACCGAGTTCCCTGTCAATCACCTCTTCAAGCGCATCGAGA CGACCTTTGTAGACGCCGCATGCGAGAAGGGGCTTCGACTGATCATCGTCCCAAGCCATGCCTGGGTGCGCAGTGACTTC GTCCTGCTGGAACGCGTTTTGTTCAACCTTGTGTCGAATGCTGTCCGCTGTACGTCGCGCGGTGGCGTGTTGATCGGCGG GCGCTTTAGGAGTGGCCAGTTGCGGATAGATGTTTGCGACACAGGTCCAGGTATTCCGGCCGATCAGCAGCAGGCGGTGT TTGGCGAATTCTACCGGTTGGCCAAGGGGGATAGCAGCGCCGGGCTGGGGCTCGGCCTTGCCATTGTCGACCGGCTCGGG CGTCTGCTGGACCATAGGGTCGAGCTGAGTTCGCGGCTGAATCGCGGCTCGCGTTTCTCTGTTTCCGTCCCGCTTGCGGC CAGGCAGCACGGCCTGATCGAAGCATCCGTCACGGATGTGATTTCTGACCCCGCGGCAGGAAAACTGGTGGTGGTCATCG ATGATGATCCGCTCGTGCTCGAAGGTATGGGCGGGATCCTGCGAAGCTGGGGGTGCCGCGTAGTGGCGGCCCCTTCCGGC ACGGCCGCGCTCTCGCAGCTTGCGATTGACCGGCATCGGCCGGATCTTATCGTTGCCGATTATCGGCTTGCCGATGGCAG GACGGGGATCCAGGCGATCAGGCATCTGCGCGAAGGATACGGAGCTGCCATTCCAGCGTTTCTCATCAGCGGCGACACGG CTCCCGAACGGCTGCGCGATGCTCGTGAGGAAGGCTACCAGCTCTTGCACAAACCGGTGACGCCGATGCGGCTGAGGGCC ATGCTGAACCAACTCCTGAGGGCAGGAAACGCAACGACGATGGTGCACTAG
Upstream 100 bases:
>100_bases AGAACATCCCTGCGTCGCATCGAAGGCCTCCATTTTGCTGCAACGCTTCTTTCAGCCTTGTGCTAATTTTAGCACGAAAA CGCGCGAGAGTGGTTTGGCT
Downstream 100 bases:
>100_bases AACCAGGCGGCTATCCGGCTATCTTACGTCGCCGTGCCCGAGAGCGCTGGCCGCGATCACCGCCTCGGTGCGGTTTGAGA CCTTCAGCGCCTTTAGTATG
Product: periplasmic sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 816; Mature: 815
Protein sequence:
>816_residues MTTLEAAEAKSLPRHDRLGVRARLLLAFFAIAAFAVLAAAAGMYAFREVGSRLEVIDTRVPPTLSALELSRSAERIIAAA PALLSASGRAQRDEVKAELAAEVGRLNATLARLKRDSAGLPLLSEVERTVSSLAANLAALDELVARRLVINERIGLLRSR VFQIEGETQRLLAPWLEVVGRESAMLVEAGKGDPTSQAGGPERLSFLIELQRLMRTAQARASAAADMLIEASTTNEPARL PVLEFQLGLAFDDLAEISKQFDPRLRPLFLEEIAKLRGLAQGDEAIAQARSEELMLVEQGEDLLAETARLSSQLGAAIDR LGDAAKADIGMAIQDALLVQRQSASALVLLVALSLLTSVLIVWLYVGKNIVRRLTALSDGMLAIIRGRLETPVVAEGSDE IAAMARAVEVFRQNTLERDKLLSEKARAADLLEQEVRQRTAELETANTFKSRFLAAASHDLRQPLHALNLFIAQLRNEAD PVERARLVGRIDVAVGSVNELLEALLDMSKLEAGVLEPEFTEFPVNHLFKRIETTFVDAACEKGLRLIIVPSHAWVRSDF VLLERVLFNLVSNAVRCTSRGGVLIGGRFRSGQLRIDVCDTGPGIPADQQQAVFGEFYRLAKGDSSAGLGLGLAIVDRLG RLLDHRVELSSRLNRGSRFSVSVPLAARQHGLIEASVTDVISDPAAGKLVVVIDDDPLVLEGMGGILRSWGCRVVAAPSG TAALSQLAIDRHRPDLIVADYRLADGRTGIQAIRHLREGYGAAIPAFLISGDTAPERLRDAREEGYQLLHKPVTPMRLRA MLNQLLRAGNATTMVH
Sequences:
>Translated_816_residues MTTLEAAEAKSLPRHDRLGVRARLLLAFFAIAAFAVLAAAAGMYAFREVGSRLEVIDTRVPPTLSALELSRSAERIIAAA PALLSASGRAQRDEVKAELAAEVGRLNATLARLKRDSAGLPLLSEVERTVSSLAANLAALDELVARRLVINERIGLLRSR VFQIEGETQRLLAPWLEVVGRESAMLVEAGKGDPTSQAGGPERLSFLIELQRLMRTAQARASAAADMLIEASTTNEPARL PVLEFQLGLAFDDLAEISKQFDPRLRPLFLEEIAKLRGLAQGDEAIAQARSEELMLVEQGEDLLAETARLSSQLGAAIDR LGDAAKADIGMAIQDALLVQRQSASALVLLVALSLLTSVLIVWLYVGKNIVRRLTALSDGMLAIIRGRLETPVVAEGSDE IAAMARAVEVFRQNTLERDKLLSEKARAADLLEQEVRQRTAELETANTFKSRFLAAASHDLRQPLHALNLFIAQLRNEAD PVERARLVGRIDVAVGSVNELLEALLDMSKLEAGVLEPEFTEFPVNHLFKRIETTFVDAACEKGLRLIIVPSHAWVRSDF VLLERVLFNLVSNAVRCTSRGGVLIGGRFRSGQLRIDVCDTGPGIPADQQQAVFGEFYRLAKGDSSAGLGLGLAIVDRLG RLLDHRVELSSRLNRGSRFSVSVPLAARQHGLIEASVTDVISDPAAGKLVVVIDDDPLVLEGMGGILRSWGCRVVAAPSG TAALSQLAIDRHRPDLIVADYRLADGRTGIQAIRHLREGYGAAIPAFLISGDTAPERLRDAREEGYQLLHKPVTPMRLRA MLNQLLRAGNATTMVH >Mature_815_residues TTLEAAEAKSLPRHDRLGVRARLLLAFFAIAAFAVLAAAAGMYAFREVGSRLEVIDTRVPPTLSALELSRSAERIIAAAP ALLSASGRAQRDEVKAELAAEVGRLNATLARLKRDSAGLPLLSEVERTVSSLAANLAALDELVARRLVINERIGLLRSRV FQIEGETQRLLAPWLEVVGRESAMLVEAGKGDPTSQAGGPERLSFLIELQRLMRTAQARASAAADMLIEASTTNEPARLP VLEFQLGLAFDDLAEISKQFDPRLRPLFLEEIAKLRGLAQGDEAIAQARSEELMLVEQGEDLLAETARLSSQLGAAIDRL GDAAKADIGMAIQDALLVQRQSASALVLLVALSLLTSVLIVWLYVGKNIVRRLTALSDGMLAIIRGRLETPVVAEGSDEI AAMARAVEVFRQNTLERDKLLSEKARAADLLEQEVRQRTAELETANTFKSRFLAAASHDLRQPLHALNLFIAQLRNEADP VERARLVGRIDVAVGSVNELLEALLDMSKLEAGVLEPEFTEFPVNHLFKRIETTFVDAACEKGLRLIIVPSHAWVRSDFV LLERVLFNLVSNAVRCTSRGGVLIGGRFRSGQLRIDVCDTGPGIPADQQQAVFGEFYRLAKGDSSAGLGLGLAIVDRLGR LLDHRVELSSRLNRGSRFSVSVPLAARQHGLIEASVTDVISDPAAGKLVVVIDDDPLVLEGMGGILRSWGCRVVAAPSGT AALSQLAIDRHRPDLIVADYRLADGRTGIQAIRHLREGYGAAIPAFLISGDTAPERLRDAREEGYQLLHKPVTPMRLRAM LNQLLRAGNATTMVH
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=347, Percent_Identity=26.5129682997118, Blast_Score=109, Evalue=7e-25, Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=30.7377049180328, Blast_Score=107, Evalue=4e-24, Organism=Escherichia coli, GI1788713, Length=372, Percent_Identity=27.1505376344086, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI87081816, Length=827, Percent_Identity=26.602176541717, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1789149, Length=288, Percent_Identity=30.9027777777778, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1786912, Length=281, Percent_Identity=30.6049822064057, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790861, Length=311, Percent_Identity=26.3665594855305, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1788393, Length=246, Percent_Identity=28.4552845528455, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790346, Length=205, Percent_Identity=30.2439024390244, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788549, Length=240, Percent_Identity=25.4166666666667, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88500; Mature: 88369
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS50885 HAMP ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLEAAEAKSLPRHDRLGVRARLLLAFFAIAAFAVLAAAAGMYAFREVGSRLEVIDTRV CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC PPTLSALELSRSAERIIAAAPALLSASGRAQRDEVKAELAAEVGRLNATLARLKRDSAGL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLLSEVERTVSSLAANLAALDELVARRLVINERIGLLRSRVFQIEGETQRLLAPWLEVVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RESAMLVEAGKGDPTSQAGGPERLSFLIELQRLMRTAQARASAAADMLIEASTTNEPARL CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC PVLEFQLGLAFDDLAEISKQFDPRLRPLFLEEIAKLRGLAQGDEAIAQARSEELMLVEQG CEEHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECC EDLLAETARLSSQLGAAIDRLGDAAKADIGMAIQDALLVQRQSASALVLLVALSLLTSVL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IVWLYVGKNIVRRLTALSDGMLAIIRGRLETPVVAEGSDEIAAMARAVEVFRQNTLERDK HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH LLSEKARAADLLEQEVRQRTAELETANTFKSRFLAAASHDLRQPLHALNLFIAQLRNEAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVERARLVGRIDVAVGSVNELLEALLDMSKLEAGVLEPEFTEFPVNHLFKRIETTFVDAA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHH CEKGLRLIIVPSHAWVRSDFVLLERVLFNLVSNAVRCTSRGGVLIGGRFRSGQLRIDVCD HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEECCCEEEEEEEC TGPGIPADQQQAVFGEFYRLAKGDSSAGLGLGLAIVDRLGRLLDHRVELSSRLNRGSRFS CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VSVPLAARQHGLIEASVTDVISDPAAGKLVVVIDDDPLVLEGMGGILRSWGCRVVAAPSG EECCHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHCCCEEEECCCC TAALSQLAIDRHRPDLIVADYRLADGRTGIQAIRHLREGYGAAIPAFLISGDTAPERLRD HHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHH AREEGYQLLHKPVTPMRLRAMLNQLLRAGNATTMVH HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTLEAAEAKSLPRHDRLGVRARLLLAFFAIAAFAVLAAAAGMYAFREVGSRLEVIDTRV CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC PPTLSALELSRSAERIIAAAPALLSASGRAQRDEVKAELAAEVGRLNATLARLKRDSAGL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLLSEVERTVSSLAANLAALDELVARRLVINERIGLLRSRVFQIEGETQRLLAPWLEVVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RESAMLVEAGKGDPTSQAGGPERLSFLIELQRLMRTAQARASAAADMLIEASTTNEPARL CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC PVLEFQLGLAFDDLAEISKQFDPRLRPLFLEEIAKLRGLAQGDEAIAQARSEELMLVEQG CEEHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECC EDLLAETARLSSQLGAAIDRLGDAAKADIGMAIQDALLVQRQSASALVLLVALSLLTSVL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IVWLYVGKNIVRRLTALSDGMLAIIRGRLETPVVAEGSDEIAAMARAVEVFRQNTLERDK HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH LLSEKARAADLLEQEVRQRTAELETANTFKSRFLAAASHDLRQPLHALNLFIAQLRNEAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVERARLVGRIDVAVGSVNELLEALLDMSKLEAGVLEPEFTEFPVNHLFKRIETTFVDAA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHH CEKGLRLIIVPSHAWVRSDFVLLERVLFNLVSNAVRCTSRGGVLIGGRFRSGQLRIDVCD HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEECCCEEEEEEEC TGPGIPADQQQAVFGEFYRLAKGDSSAGLGLGLAIVDRLGRLLDHRVELSSRLNRGSRFS CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VSVPLAARQHGLIEASVTDVISDPAAGKLVVVIDDDPLVLEGMGGILRSWGCRVVAAPSG EECCHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHCCCEEEECCCC TAALSQLAIDRHRPDLIVADYRLADGRTGIQAIRHLREGYGAAIPAFLISGDTAPERLRD HHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHH AREEGYQLLHKPVTPMRLRAMLNQLLRAGNATTMVH HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA