Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is pucI [H]
Identifier: 110632694
GI number: 110632694
Start: 368883
End: 370238
Strand: Reverse
Name: pucI [H]
Synonym: Meso_0333
Alternate gene names: 110632694
Gene position: 370238-368883 (Counterclockwise)
Preceding gene: 110632697
Following gene: 110632693
Centisome position: 8.39
GC content: 60.18
Gene sequence:
>1356_bases ATGGCAAATACCCGGGAATTTGTGGCGCCGCCTCAAATCGGCGCCCACAGCAAGAATATCGGCGAGGAATCGCTCGCTCC GCAGCAGACCCGAATCATGGGGCCCACATCCTACCTGCTCGCATGGATGGGTGGTTGCGTCTCGATCGGCACCTTCACGA TGGGCTCCTCGATCGTCGGCACGCTCAACCTGCTGCAGGCCACCATCGCCATCGCTATCGGCTGCCTCGTTATCGGCGTC GCGCTGACCATCAACGGTGCCGCCGGCTATAAATACGGCATCCCCTTCATGGTGCAGGCGCGCAGCGCCTTCGGTTTCAC CGGCACGGGATTTCCCGGCATCGTTCGCGCCGTGCCGGCCATCGTATGGTACGGCTTCCAGAGCTGGATCGGTGCGGGCG CGCTGAATGCAGTTACCGCGACCATGTTCGGCTTCGACAATCTCGTCGCCTGGTTCATCATCTTCCAGCTATTGCAAATC GGCCTTTCGGTGCTCGGTTTCCAAGGCATCAAATGGCTGGAGAATATCGGCGCGGTCTTCATCCTCTTTTCGCTGTTTTA CATGTTCTTCAGCGTGATCAACCGCTACGGCGCCGAAATCACCGCCAACCTCGTCAATATCGAGGGAACCTGGGGCCTGC CCTTCTGGGGCGCAACGATGCTCTTTCTGGGCATCTACTCGACGATGATCCTGAACGTCAGCGATTACGCGCGCGAGCAC ACGCACGGCTCCTCGCCGAGCCTGCTCGTCACCATCTATTCGATGTCGATCCTGCCGGTGACACTGTTCATGGGGCTGAT CGGGCTGATGGTCTCCGGCGCCACCGGCGTCACGGACCCGATCCAGGTCTTCGCCAACGCGGTCGACAACAAACCACTTT TGATCGTGACGCTGCTCTTCATCGCCTTCGCGCAGGTCACCACCAATGTTCTCAACAATGTCATCCCGCCAACCTATGTG CTGATGGACATCTTCAAACTGCCCTTCAAGCTCTCGACCGTTATCGTCGGCTTTCTGGCCTTCGCCACCTTTCCGTGGGA GCTGGTCAAGGACGAAAGCGCGGCCGGCCTGCAGATCTTCGTGCAGACTTACTCCGCCTTCCTCGGCCCGATCTTCGCGG TCATGGTGGTCGATTATTACCTGCTGCGCAAACGCACGCTGGATGTCGGGAAATTGTACGATGAGACCGGTCCCTATAGC GGCGTCAACTGGGCGGCGATCATCGCCTCGCTGATCGGCGCAGTCGTCGCGCTGACCTTCTCCGCTGTCTCGTGGTACGC GAGCCTCATCCCCGCCGGCGTGATCTACTGGCTGCTGATGCAGTACTGGGGGCCTGCGCAGCGCTTCCGCGCCTGA
Upstream 100 bases:
>100_bases TCGCTGACATGCGCGATCTCTCTGCTGGAGTGCCGATGGCTGGATGGAGGACAGTGCCAGCCCCGGACGAATGTCTCCGG TGGGAATGGGAGGTAATCAA
Downstream 100 bases:
>100_bases CCCGAACCGGCGCTCCGGCGGGGCATGCCTGCCGGGCGCCATTATGTGAACGACTATCGGAGACCCCACCCATGCGCATC AGGGTGATCAATCCCAACAC
Product: permease for cytosine/purines, uracil, thiamine, allantoin
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MANTREFVAPPQIGAHSKNIGEESLAPQQTRIMGPTSYLLAWMGGCVSIGTFTMGSSIVGTLNLLQATIAIAIGCLVIGV ALTINGAAGYKYGIPFMVQARSAFGFTGTGFPGIVRAVPAIVWYGFQSWIGAGALNAVTATMFGFDNLVAWFIIFQLLQI GLSVLGFQGIKWLENIGAVFILFSLFYMFFSVINRYGAEITANLVNIEGTWGLPFWGATMLFLGIYSTMILNVSDYAREH THGSSPSLLVTIYSMSILPVTLFMGLIGLMVSGATGVTDPIQVFANAVDNKPLLIVTLLFIAFAQVTTNVLNNVIPPTYV LMDIFKLPFKLSTVIVGFLAFATFPWELVKDESAAGLQIFVQTYSAFLGPIFAVMVVDYYLLRKRTLDVGKLYDETGPYS GVNWAAIIASLIGAVVALTFSAVSWYASLIPAGVIYWLLMQYWGPAQRFRA
Sequences:
>Translated_451_residues MANTREFVAPPQIGAHSKNIGEESLAPQQTRIMGPTSYLLAWMGGCVSIGTFTMGSSIVGTLNLLQATIAIAIGCLVIGV ALTINGAAGYKYGIPFMVQARSAFGFTGTGFPGIVRAVPAIVWYGFQSWIGAGALNAVTATMFGFDNLVAWFIIFQLLQI GLSVLGFQGIKWLENIGAVFILFSLFYMFFSVINRYGAEITANLVNIEGTWGLPFWGATMLFLGIYSTMILNVSDYAREH THGSSPSLLVTIYSMSILPVTLFMGLIGLMVSGATGVTDPIQVFANAVDNKPLLIVTLLFIAFAQVTTNVLNNVIPPTYV LMDIFKLPFKLSTVIVGFLAFATFPWELVKDESAAGLQIFVQTYSAFLGPIFAVMVVDYYLLRKRTLDVGKLYDETGPYS GVNWAAIIASLIGAVVALTFSAVSWYASLIPAGVIYWLLMQYWGPAQRFRA >Mature_450_residues ANTREFVAPPQIGAHSKNIGEESLAPQQTRIMGPTSYLLAWMGGCVSIGTFTMGSSIVGTLNLLQATIAIAIGCLVIGVA LTINGAAGYKYGIPFMVQARSAFGFTGTGFPGIVRAVPAIVWYGFQSWIGAGALNAVTATMFGFDNLVAWFIIFQLLQIG LSVLGFQGIKWLENIGAVFILFSLFYMFFSVINRYGAEITANLVNIEGTWGLPFWGATMLFLGIYSTMILNVSDYAREHT HGSSPSLLVTIYSMSILPVTLFMGLIGLMVSGATGVTDPIQVFANAVDNKPLLIVTLLFIAFAQVTTNVLNNVIPPTYVL MDIFKLPFKLSTVIVGFLAFATFPWELVKDESAAGLQIFVQTYSAFLGPIFAVMVVDYYLLRKRTLDVGKLYDETGPYSG VNWAAIIASLIGAVVALTFSAVSWYASLIPAGVIYWLLMQYWGPAQRFRA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=468, Percent_Identity=24.1452991452991, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6319495, Length=444, Percent_Identity=23.1981981981982, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6322219, Length=438, Percent_Identity=22.8310502283105, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319429, Length=438, Percent_Identity=24.6575342465753, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 48894; Mature: 48763
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTREFVAPPQIGAHSKNIGEESLAPQQTRIMGPTSYLLAWMGGCVSIGTFTMGSSIVG CCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHCHHHHH TLNLLQATIAIAIGCLVIGVALTINGAAGYKYGIPFMVQARSAFGFTGTGFPGIVRAVPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCCCCCCCCHHHHHHHHH IVWYGFQSWIGAGALNAVTATMFGFDNLVAWFIIFQLLQIGLSVLGFQGIKWLENIGAVF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILFSLFYMFFSVINRYGAEITANLVNIEGTWGLPFWGATMLFLGIYSTMILNVSDYAREH HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH THGSSPSLLVTIYSMSILPVTLFMGLIGLMVSGATGVTDPIQVFANAVDNKPLLIVTLLF CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH IAFAQVTTNVLNNVIPPTYVLMDIFKLPFKLSTVIVGFLAFATFPWELVKDESAAGLQIF HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHH VQTYSAFLGPIFAVMVVDYYLLRKRTLDVGKLYDETGPYSGVNWAAIIASLIGAVVALTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SAVSWYASLIPAGVIYWLLMQYWGPAQRFRA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure ANTREFVAPPQIGAHSKNIGEESLAPQQTRIMGPTSYLLAWMGGCVSIGTFTMGSSIVG CCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHCHHHHH TLNLLQATIAIAIGCLVIGVALTINGAAGYKYGIPFMVQARSAFGFTGTGFPGIVRAVPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCCCCCCCCHHHHHHHHH IVWYGFQSWIGAGALNAVTATMFGFDNLVAWFIIFQLLQIGLSVLGFQGIKWLENIGAVF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILFSLFYMFFSVINRYGAEITANLVNIEGTWGLPFWGATMLFLGIYSTMILNVSDYAREH HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH THGSSPSLLVTIYSMSILPVTLFMGLIGLMVSGATGVTDPIQVFANAVDNKPLLIVTLLF CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH IAFAQVTTNVLNNVIPPTYVLMDIFKLPFKLSTVIVGFLAFATFPWELVKDESAAGLQIF HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHH VQTYSAFLGPIFAVMVVDYYLLRKRTLDVGKLYDETGPYSGVNWAAIIASLIGAVVALTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SAVSWYASLIPAGVIYWLLMQYWGPAQRFRA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]