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The map label for this gene is viuB [H]

Identifier: 110632697

GI number: 110632697

Start: 372938

End: 374023

Strand: Reverse

Name: viuB [H]

Synonym: Meso_0336

Alternate gene names: 110632697

Gene position: 374023-372938 (Counterclockwise)

Preceding gene: 110632698

Following gene: 110632694

Centisome position: 8.48

GC content: 64.36

Gene sequence:

>1086_bases
ATGAACGCGAGGCTACCGCTGCGCGCCGAAACCGCCATCTCGCTGGCCAGTCCGCTCGAAGTCATGGCAAGGTTGCGCGA
CCACTTCGTCGAGCATGGCACCGTTTCCGGAACTGACGAGAGATGGACCGTCGCGTTCGATATCGGCGAGGCCGAAGCGC
TTGCCTGCGATGGACATGTCCGGTTCCGCGTCGCAGCCGCAGACCCAACCTCCCTCGCCTATCTTCAATGGGGCGTGGCG
GAACATGTCTGTGAGTTCGCGCCCGCCGAGGCGCCGGAAATCGTCTGGAAAGGCGGCGTCATACCCGGCGCGCCGCTGCC
TTATTTCCGCGAGATGCGCGTTCTGCGCGCCCGGCAGATCACGCCGCGCATGCGCAGGCTCACGCTTGCCGGCCGCGATC
TTGACCGCTTCTCCCATGGCGGCATGCATGTCCGCCTGCTGCTTTCGCCGGAGACGGATGTGAAACCGGTCTGGCCTGTG
ATGGGCAAGGATGGCCGCCAGGCCTGGCCAGAGGGTCCCCGCCCTATCCACCGCGTCTATACGATCAGGCGGATCGACAT
CGCGGCGGGTGAGATCGATGTCGATTTCGTTCTTCATGAGGGCAACGAAACACCCGGCGCCAATTTTGCCCGCGAGGCAA
GGCCAGGCGATGTGGTCGGCATGACCGGTCCCGGCGGCGGCGGGCTGCGCGAGGCTGACTGGTACCTGCTTGCAGGAGAC
GAAACGGCGCTTCCGGCAATCGGGCGCATGCTGGAGGAGATGCCGGCCGGCAAGAAGGTTGTCGCTCTCGTGGAAATCGC
TGATCATGCCGAACGCCAGGAACTCCAAACGAAAGCGGAACTCGATCTGCGCTGGCTTTCACGCGAAGGCAGGCCGGCTG
GCACGACCAAATTGCTTGCCGATGCAATCAGGGCACTCGATTTCGCTGCCGATGCGTCGGTGTTCGTATGGGCGGGCTGT
GAACATGCCGCGGCCCGGGAGATTCGCGCCCATCTGCATATGGAGCGCGGCCTGCCGCGCCGGAACAGCCTCATCGCGGC
CTACTGGCGGCATGGAATGGCCGGAGAAGTCGAAAACTCCGACTAA

Upstream 100 bases:

>100_bases
CGGGGCTGATAGCCATCGCAACCATCCCGGCTATCGCCCTCGTCTCCGGCCAGGGCGCCGTGCGCGACGTAGCCGCGTTC
ATACCTTCTGGAGAAAGCCC

Downstream 100 bases:

>100_bases
ACCCGTTTGATGCCGCATCTCGATCTCGAGAAACGAGCAAAAGCGGCGAGCCCAGTTATCCGCCCGCCGCCATCGCGAAG
CGGTGGCGCACGATCGCCAC

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MNARLPLRAETAISLASPLEVMARLRDHFVEHGTVSGTDERWTVAFDIGEAEALACDGHVRFRVAAADPTSLAYLQWGVA
EHVCEFAPAEAPEIVWKGGVIPGAPLPYFREMRVLRARQITPRMRRLTLAGRDLDRFSHGGMHVRLLLSPETDVKPVWPV
MGKDGRQAWPEGPRPIHRVYTIRRIDIAAGEIDVDFVLHEGNETPGANFAREARPGDVVGMTGPGGGGLREADWYLLAGD
ETALPAIGRMLEEMPAGKKVVALVEIADHAERQELQTKAELDLRWLSREGRPAGTTKLLADAIRALDFAADASVFVWAGC
EHAAAREIRAHLHMERGLPRRNSLIAAYWRHGMAGEVENSD

Sequences:

>Translated_361_residues
MNARLPLRAETAISLASPLEVMARLRDHFVEHGTVSGTDERWTVAFDIGEAEALACDGHVRFRVAAADPTSLAYLQWGVA
EHVCEFAPAEAPEIVWKGGVIPGAPLPYFREMRVLRARQITPRMRRLTLAGRDLDRFSHGGMHVRLLLSPETDVKPVWPV
MGKDGRQAWPEGPRPIHRVYTIRRIDIAAGEIDVDFVLHEGNETPGANFAREARPGDVVGMTGPGGGGLREADWYLLAGD
ETALPAIGRMLEEMPAGKKVVALVEIADHAERQELQTKAELDLRWLSREGRPAGTTKLLADAIRALDFAADASVFVWAGC
EHAAAREIRAHLHMERGLPRRNSLIAAYWRHGMAGEVENSD
>Mature_361_residues
MNARLPLRAETAISLASPLEVMARLRDHFVEHGTVSGTDERWTVAFDIGEAEALACDGHVRFRVAAADPTSLAYLQWGVA
EHVCEFAPAEAPEIVWKGGVIPGAPLPYFREMRVLRARQITPRMRRLTLAGRDLDRFSHGGMHVRLLLSPETDVKPVWPV
MGKDGRQAWPEGPRPIHRVYTIRRIDIAAGEIDVDFVLHEGNETPGANFAREARPGDVVGMTGPGGGGLREADWYLLAGD
ETALPAIGRMLEEMPAGKKVVALVEIADHAERQELQTKAELDLRWLSREGRPAGTTKLLADAIRALDFAADASVFVWAGC
EHAAAREIRAHLHMERGLPRRNSLIAAYWRHGMAGEVENSD

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=248, Percent_Identity=31.8548387096774, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 39794; Mature: 39794

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARLPLRAETAISLASPLEVMARLRDHFVEHGTVSGTDERWTVAFDIGEAEALACDGHV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCE
RFRVAAADPTSLAYLQWGVAEHVCEFAPAEAPEIVWKGGVIPGAPLPYFREMRVLRARQI
EEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
TPRMRRLTLAGRDLDRFSHGGMHVRLLLSPETDVKPVWPVMGKDGRQAWPEGPRPIHRVY
CHHHHHEECCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE
TIRRIDIAAGEIDVDFVLHEGNETPGANFAREARPGDVVGMTGPGGGGLREADWYLLAGD
EEEEEEEECCCEEEEEEEECCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCEEEEECC
ETALPAIGRMLEEMPAGKKVVALVEIADHAERQELQTKAELDLRWLSREGRPAGTTKLLA
CCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
DAIRALDFAADASVFVWAGCEHAAAREIRAHLHMERGLPRRNSLIAAYWRHGMAGEVENS
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCC
D
C
>Mature Secondary Structure
MNARLPLRAETAISLASPLEVMARLRDHFVEHGTVSGTDERWTVAFDIGEAEALACDGHV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCE
RFRVAAADPTSLAYLQWGVAEHVCEFAPAEAPEIVWKGGVIPGAPLPYFREMRVLRARQI
EEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
TPRMRRLTLAGRDLDRFSHGGMHVRLLLSPETDVKPVWPVMGKDGRQAWPEGPRPIHRVY
CHHHHHEECCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE
TIRRIDIAAGEIDVDFVLHEGNETPGANFAREARPGDVVGMTGPGGGGLREADWYLLAGD
EEEEEEEECCCEEEEEEEECCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCEEEEECC
ETALPAIGRMLEEMPAGKKVVALVEIADHAERQELQTKAELDLRWLSREGRPAGTTKLLA
CCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
DAIRALDFAADASVFVWAGCEHAAAREIRAHLHMERGLPRRNSLIAAYWRHGMAGEVENS
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]