| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yghU [H]
Identifier: 110632683
GI number: 110632683
Start: 357946
End: 358821
Strand: Reverse
Name: yghU [H]
Synonym: Meso_0322
Alternate gene names: 110632683
Gene position: 358821-357946 (Counterclockwise)
Preceding gene: 110632684
Following gene: 110632679
Centisome position: 8.13
GC content: 57.53
Gene sequence:
>876_bases ATGACGGATTCACCCACATATACGCCGCCGAAGGTCTGGGTTTGGAATCAGCCAAGTGGGGGCCGGTTCGCGAATATCAA TCGACCGGTCGCCGGACCAACCCATGAAAAGGAATTGCCTGTCGGCCGTCATCCGCTCCAACTCTACTCGCAGGCAACAC CAAACGGGCAAAAAGTCACCATCCTGCTTGAGGAACTGCTCGCACTCGGCCACAGGGGCGCCGAATATGACGCCTGGCTG ATCAGAATCGGTGATGGAGACCAGTTCGGGAGCGGCTTTGTAAACGTCAACCCGAATTCTAAGATCCCTGCCCTGATGGA CCGTTCCGGCCCGGAACCGGTACGCGTCTTCGAATCAGGCGCAATCCTGCTTTACCTGGCCGAGAAATTCGGCGCCTTCC TGCCTCAAGACCCGGCCAGACGCGCCGAGTGCCTGTCCTGGCTCTTCTGGCAGATGGGAAGCGCTCCCTATATCGGGGGC GGTTTCGGCCACTTCTACGTCTACGCGCCCACCAAGATCGAATATGCGATCGACCGGTTTACGATGGAGGCAAAACGCCT GCTGGACGTGCTCAACAGGCATTTTGCCGAAAACAAGTTCCTCGCGGGGGAAGAATATACCATTGCCGATATGGCGGCTT TTCCATGGTATGGCGGGCTCGTGAAGGGATGGCTCTATGAGGCGGCCGATTTTCTCTCGGTTCACGAATACAGTCACGTG CAGCGCTGGGCGGACGATATTTTCAGCCGCCCTGCCGTCCAGCGCGGTCGAATGGTCAATCGCATCAGTGGAGAGCTTTC CACTCAGCTTCACGAACGCCATGACGCCAGTGACTTCGAAACCAAGACACAGGACAAGCTGAAGCTCACCAGCTAG
Upstream 100 bases:
>100_bases CTCCGTGCAATTGCCTGAGGCAATCGCCACGAGACGGCATACGCAATCAGCTCGCGCCCATTCGGCCGGAACTTCATTGA TCAGGAGTTTGGAACACACG
Downstream 100 bases:
>100_bases CTGCGCATCCCAAACCCGATATGGCGGGTGGCCGACGCACCATCACTCAACCGTGAGGCCCCACTGCGGCATTCAGCGCC TCGGCCTGCTCCATCTGGAG
Product: glutathione S-transferase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTDSPTYTPPKVWVWNQPSGGRFANINRPVAGPTHEKELPVGRHPLQLYSQATPNGQKVTILLEELLALGHRGAEYDAWL IRIGDGDQFGSGFVNVNPNSKIPALMDRSGPEPVRVFESGAILLYLAEKFGAFLPQDPARRAECLSWLFWQMGSAPYIGG GFGHFYVYAPTKIEYAIDRFTMEAKRLLDVLNRHFAENKFLAGEEYTIADMAAFPWYGGLVKGWLYEAADFLSVHEYSHV QRWADDIFSRPAVQRGRMVNRISGELSTQLHERHDASDFETKTQDKLKLTS
Sequences:
>Translated_291_residues MTDSPTYTPPKVWVWNQPSGGRFANINRPVAGPTHEKELPVGRHPLQLYSQATPNGQKVTILLEELLALGHRGAEYDAWL IRIGDGDQFGSGFVNVNPNSKIPALMDRSGPEPVRVFESGAILLYLAEKFGAFLPQDPARRAECLSWLFWQMGSAPYIGG GFGHFYVYAPTKIEYAIDRFTMEAKRLLDVLNRHFAENKFLAGEEYTIADMAAFPWYGGLVKGWLYEAADFLSVHEYSHV QRWADDIFSRPAVQRGRMVNRISGELSTQLHERHDASDFETKTQDKLKLTS >Mature_290_residues TDSPTYTPPKVWVWNQPSGGRFANINRPVAGPTHEKELPVGRHPLQLYSQATPNGQKVTILLEELLALGHRGAEYDAWLI RIGDGDQFGSGFVNVNPNSKIPALMDRSGPEPVRVFESGAILLYLAEKFGAFLPQDPARRAECLSWLFWQMGSAPYIGGG FGHFYVYAPTKIEYAIDRFTMEAKRLLDVLNRHFAENKFLAGEEYTIADMAAFPWYGGLVKGWLYEAADFLSVHEYSHVQ RWADDIFSRPAVQRGRMVNRISGELSTQLHERHDASDFETKTQDKLKLTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=286, Percent_Identity=72.027972027972, Blast_Score=436, Evalue=1e-124, Organism=Escherichia coli, GI1788640, Length=227, Percent_Identity=42.2907488986784, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI87081789, Length=186, Percent_Identity=29.0322580645161, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=256, Percent_Identity=29.296875, Blast_Score=96, Evalue=7e-21, Organism=Drosophila melanogaster, GI28571670, Length=178, Percent_Identity=26.9662921348315, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17864598, Length=177, Percent_Identity=29.3785310734463, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI17864592, Length=204, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32852; Mature: 32720
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSPTYTPPKVWVWNQPSGGRFANINRPVAGPTHEKELPVGRHPLQLYSQATPNGQKVT CCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEH ILLEELLALGHRGAEYDAWLIRIGDGDQFGSGFVNVNPNSKIPALMDRSGPEPVRVFESG HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCC AILLYLAEKFGAFLPQDPARRAECLSWLFWQMGSAPYIGGGFGHFYVYAPTKIEYAIDRF EEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCHHHHHHHH TMEAKRLLDVLNRHFAENKFLAGEEYTIADMAAFPWYGGLVKGWLYEAADFLSVHEYSHV HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QRWADDIFSRPAVQRGRMVNRISGELSTQLHERHDASDFETKTQDKLKLTS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC >Mature Secondary Structure TDSPTYTPPKVWVWNQPSGGRFANINRPVAGPTHEKELPVGRHPLQLYSQATPNGQKVT CCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEH ILLEELLALGHRGAEYDAWLIRIGDGDQFGSGFVNVNPNSKIPALMDRSGPEPVRVFESG HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCC AILLYLAEKFGAFLPQDPARRAECLSWLFWQMGSAPYIGGGFGHFYVYAPTKIEYAIDRF EEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCHHHHHHHH TMEAKRLLDVLNRHFAENKFLAGEEYTIADMAAFPWYGGLVKGWLYEAADFLSVHEYSHV HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QRWADDIFSRPAVQRGRMVNRISGELSTQLHERHDASDFETKTQDKLKLTS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]