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The map label for this gene is fliP [H]

Identifier: 110632650

GI number: 110632650

Start: 328040

End: 328780

Strand: Reverse

Name: fliP [H]

Synonym: Meso_0289

Alternate gene names: 110632650

Gene position: 328780-328040 (Counterclockwise)

Preceding gene: 110632651

Following gene: 110632649

Centisome position: 7.45

GC content: 57.76

Gene sequence:

>741_bases
ATGATGCGCCTGCTTCTCGCTCTTCTCTTCGCAATCTTTGCCGGGACCCACCCGGCCGCCGCGCAGACGCTCGATCTCGG
TGCGCTCGCCGGTCAAGCCAATGGCTCGACAATTGGCTATATCATCCAGATTTTCGGTCTGCTGACGGTGCTCTCGATAG
CGCCGGGCATTCTCATCATGGTGACGAGCTTCACCCGGTTCGTCATAGTGTTCTCGATCCTGCGCACCGGTATCGGCCTG
CCCTCCACGCCAGCCAATCTCATCCTGGTCAGCCTGGCGCTTTTCATGACCTTCTACGTCATGGCGCCCACTTTCGATCG
GGCATGGAGCGAGGGCGTGCGTCCGCTCATGGCCAACCAGATCGACGAGACCACCGCCGTGGAACGCATCGCTGAGCCGT
TTCGCGCGTTCATGAGCGCGAATGTGCGGGAGGAGGATTACACGCTCTTTGCCGATCTCGCCGCTGAACGCGGCGGAATC
CAGCAGACGACGGATCAGGCAGATCTTCGGGTGCTTATCCCGGCATTCATGATCTCGGAAATCAGGCGCGGATTTGAAAT
TGGCTTTCTCATTGTGCTGCCCTTTCTCGTCATCGATCTGATCGTGGCGACGATCACCATGGCCATGGGCATGATGATGC
TTCCGCCGACAGTCATATCCCTGCCCTTCAAGATCCTGTTCTTCGTTCTTATCGACGGTTGGAATCTGCTTGTAGGCAGC
CTGGTCCGATCTTTCACTTAA

Upstream 100 bases:

>100_bases
CCAGCGGCTTTCAGCACCTGAAGTCGGATATTCTCGAGCGCGCGCGCATCCGCAGCGATGACCGCGTGAAGCAAGTATTG
ATCATGAGCTTCCTATACGA

Downstream 100 bases:

>100_bases
ACCGCCTTCCCCCGAAAAATCAGCTGACCGTCCGCTATTATCCTTTTGGTAGCAATTCGCGGGCATAAACACTGCCATGC
ATGACGGAGTGAGTTCGCGT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MMRLLLALLFAIFAGTHPAAAQTLDLGALAGQANGSTIGYIIQIFGLLTVLSIAPGILIMVTSFTRFVIVFSILRTGIGL
PSTPANLILVSLALFMTFYVMAPTFDRAWSEGVRPLMANQIDETTAVERIAEPFRAFMSANVREEDYTLFADLAAERGGI
QQTTDQADLRVLIPAFMISEIRRGFEIGFLIVLPFLVIDLIVATITMAMGMMMLPPTVISLPFKILFFVLIDGWNLLVGS
LVRSFT

Sequences:

>Translated_246_residues
MMRLLLALLFAIFAGTHPAAAQTLDLGALAGQANGSTIGYIIQIFGLLTVLSIAPGILIMVTSFTRFVIVFSILRTGIGL
PSTPANLILVSLALFMTFYVMAPTFDRAWSEGVRPLMANQIDETTAVERIAEPFRAFMSANVREEDYTLFADLAAERGGI
QQTTDQADLRVLIPAFMISEIRRGFEIGFLIVLPFLVIDLIVATITMAMGMMMLPPTVISLPFKILFFVLIDGWNLLVGS
LVRSFT
>Mature_246_residues
MMRLLLALLFAIFAGTHPAAAQTLDLGALAGQANGSTIGYIIQIFGLLTVLSIAPGILIMVTSFTRFVIVFSILRTGIGL
PSTPANLILVSLALFMTFYVMAPTFDRAWSEGVRPLMANQIDETTAVERIAEPFRAFMSANVREEDYTLFADLAAERGGI
QQTTDQADLRVLIPAFMISEIRRGFEIGFLIVLPFLVIDLIVATITMAMGMMMLPPTVISLPFKILFFVLIDGWNLLVGS
LVRSFT

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=213, Percent_Identity=45.5399061032864, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26915; Mature: 26915

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRLLLALLFAIFAGTHPAAAQTLDLGALAGQANGSTIGYIIQIFGLLTVLSIAPGILIM
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
VTSFTRFVIVFSILRTGIGLPSTPANLILVSLALFMTFYVMAPTFDRAWSEGVRPLMANQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
IDETTAVERIAEPFRAFMSANVREEDYTLFADLAAERGGIQQTTDQADLRVLIPAFMISE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
IRRGFEIGFLIVLPFLVIDLIVATITMAMGMMMLPPTVISLPFKILFFVLIDGWNLLVGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVRSFT
HHHHCC
>Mature Secondary Structure
MMRLLLALLFAIFAGTHPAAAQTLDLGALAGQANGSTIGYIIQIFGLLTVLSIAPGILIM
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
VTSFTRFVIVFSILRTGIGLPSTPANLILVSLALFMTFYVMAPTFDRAWSEGVRPLMANQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
IDETTAVERIAEPFRAFMSANVREEDYTLFADLAAERGGIQQTTDQADLRVLIPAFMISE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
IRRGFEIGFLIVLPFLVIDLIVATITMAMGMMMLPPTVISLPFKILFFVLIDGWNLLVGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVRSFT
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194 [H]