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The map label for this gene is flaC [H]

Identifier: 110632648

GI number: 110632648

Start: 325947

End: 326828

Strand: Reverse

Name: flaC [H]

Synonym: Meso_0287

Alternate gene names: 110632648

Gene position: 326828-325947 (Counterclockwise)

Preceding gene: 110632649

Following gene: 110632647

Centisome position: 7.41

GC content: 57.94

Gene sequence:

>882_bases
GTGGCAAGCATCATGACAAATACCTCTGCGATGGTGGCATTGCAGAGTCTGAAGGCAACCAACAAAGCGCTCGAAACTGT
CCAGGGGCGTATTTCCACCGGTTACCGGGTGGCCGAAGCCAGCGACAATGCGGCTTACTGGTCCATTGCCACCACGATGC
GATCGGACAACAAGGCGCTCTCCGCCATCCAGGATTCCCTCGGGCTCGGTGCCGGACGGATCGACATTGCCTATACCGCG
ATGGACGACGTCATCGAGGCTGTTGACGCGATCAAAACCAAGCTGATCAATGCGCGCGGCGCAAGCGCGGAAAACCAGGA
AAAGATCCAGGCCGAGATCGACATCCTTCAGGACCAGATCAAGTCGGCAGCGATCGGCGCCAGCTACGCCGGTACCAACA
TACTTGCAACCGATAGCGCGGGACCGCTGGACATTGCCGCTTCCTACAACCGCGCCTCGGACGGCACGGTCAGTATCGGC
ACGATCTCCGTCGATCTTGCGGGAATCACTCTGTTTGCCGCGGACGGCACGACAACCGACGCGACGCAGCATCTTGCGCA
TGACGTCATGCAGATCGATCTCGTGGCCAACGGAGACGAAGCTTCGATCGACGCATATCTGGAAGACATCGAGACCGCGC
TTGCCGCAATGTCCACCGCGGCGGCAAACCTGGGATCAGCAAAGAACCGCCTCGACCTGCAAAAGGACTTCGTTTCCAAT
CTCATGGATTCGATCGAACGAGGCGTAGGCCAACTCGTCGATGCCGACATGAACGAGGAATCGACCCGCCTTCAGGCTCT
TCAGGTTCAGCAACAGCTGGGCATTCAGGCTTTGTCCATCGCCAACCAGAACGCCCAAAACATCCTGTCCCTGTTCAAAT
AA

Upstream 100 bases:

>100_bases
TTTTGTTGCGGTTTCAGGTTAAGCAATCGTTAACCATAAACTTGTACCTATCGTTAACCATCATGCCCGCAGGGGCGCGG
GAAGACGAAGGGGCAAGCGC

Downstream 100 bases:

>100_bases
AACAGCCTTCCTCCTGAGACGGCCCGCCCGCGCAGGAGCTCGAATGGTTCGCACAAGCTTCACCTCCTAGGCTGGAATCG
TGTTCCGCCTGGGAGCGAGT

Product: flagellin-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MASIMTNTSAMVALQSLKATNKALETVQGRISTGYRVAEASDNAAYWSIATTMRSDNKALSAIQDSLGLGAGRIDIAYTA
MDDVIEAVDAIKTKLINARGASAENQEKIQAEIDILQDQIKSAAIGASYAGTNILATDSAGPLDIAASYNRASDGTVSIG
TISVDLAGITLFAADGTTTDATQHLAHDVMQIDLVANGDEASIDAYLEDIETALAAMSTAAANLGSAKNRLDLQKDFVSN
LMDSIERGVGQLVDADMNEESTRLQALQVQQQLGIQALSIANQNAQNILSLFK

Sequences:

>Translated_293_residues
MASIMTNTSAMVALQSLKATNKALETVQGRISTGYRVAEASDNAAYWSIATTMRSDNKALSAIQDSLGLGAGRIDIAYTA
MDDVIEAVDAIKTKLINARGASAENQEKIQAEIDILQDQIKSAAIGASYAGTNILATDSAGPLDIAASYNRASDGTVSIG
TISVDLAGITLFAADGTTTDATQHLAHDVMQIDLVANGDEASIDAYLEDIETALAAMSTAAANLGSAKNRLDLQKDFVSN
LMDSIERGVGQLVDADMNEESTRLQALQVQQQLGIQALSIANQNAQNILSLFK
>Mature_292_residues
ASIMTNTSAMVALQSLKATNKALETVQGRISTGYRVAEASDNAAYWSIATTMRSDNKALSAIQDSLGLGAGRIDIAYTAM
DDVIEAVDAIKTKLINARGASAENQEKIQAEIDILQDQIKSAAIGASYAGTNILATDSAGPLDIAASYNRASDGTVSIGT
ISVDLAGITLFAADGTTTDATQHLAHDVMQIDLVANGDEASIDAYLEDIETALAAMSTAAANLGSAKNRLDLQKDFVSNL
MDSIERGVGQLVDADMNEESTRLQALQVQQQLGIQALSIANQNAQNILSLFK

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 30719; Mature: 30587

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIMTNTSAMVALQSLKATNKALETVQGRISTGYRVAEASDNAAYWSIATTMRSDNKAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHCCHHHH
SAIQDSLGLGAGRIDIAYTAMDDVIEAVDAIKTKLINARGASAENQEKIQAEIDILQDQI
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KSAAIGASYAGTNILATDSAGPLDIAASYNRASDGTVSIGTISVDLAGITLFAADGTTTD
HHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCH
ATQHLAHDVMQIDLVANGDEASIDAYLEDIETALAAMSTAAANLGSAKNRLDLQKDFVSN
HHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LMDSIERGVGQLVDADMNEESTRLQALQVQQQLGIQALSIANQNAQNILSLFK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
ASIMTNTSAMVALQSLKATNKALETVQGRISTGYRVAEASDNAAYWSIATTMRSDNKAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHCCHHHH
SAIQDSLGLGAGRIDIAYTAMDDVIEAVDAIKTKLINARGASAENQEKIQAEIDILQDQI
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KSAAIGASYAGTNILATDSAGPLDIAASYNRASDGTVSIGTISVDLAGITLFAADGTTTD
HHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCH
ATQHLAHDVMQIDLVANGDEASIDAYLEDIETALAAMSTAAANLGSAKNRLDLQKDFVSN
HHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LMDSIERGVGQLVDADMNEESTRLQALQVQQQLGIQALSIANQNAQNILSLFK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335288; 11481430 [H]