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The map label for this gene is flgD [C]

Identifier: 110632635

GI number: 110632635

Start: 313365

End: 313754

Strand: Reverse

Name: flgD [C]

Synonym: Meso_0274

Alternate gene names: 110632635

Gene position: 313754-313365 (Counterclockwise)

Preceding gene: 110632636

Following gene: 110632634

Centisome position: 7.11

GC content: 58.72

Gene sequence:

>390_bases
ATGAATGTCTCGACCGTGACGTCAACTCCGCAAAACCAGCAGACGGCGTCGGCCCCGCAGACGGTGGACTATCAGTCTTT
CCTTCGGCTGCTCGTCGCACAAATGAAGAATCAGGACCCGACCAGCCCGATGGAATCCACGGATTACGTGGCCCAGCTTG
CGACCTTCTCCCAGGTGGAACAGTCGGTGCAGATGAATTCGAAGCTGGAGCAGATCCTTGCTGCCTCGGCGCTTTCCCAA
GCAGGCGGCGTGATCGGCCGTGAGATAACCTCGGCGGACGGGAGCGTGACGGGGATAGTCAAGGAGGTAAAGCTTTATAG
CGACGGGGTCATCGCAAAGCTTGAGAGCGGACAAGAAGTGGTCGTCGGCCCCGGTGTCGTGATAAGCTGA

Upstream 100 bases:

>100_bases
TGAAGGCGATCCGGGCGCTCTATCCGATTGAGGAAGAGATTCTCTCGGCAGGGCGCCAGCAGGAACAAGCCATATTCGCC
AAGGCCGTGGGAGAATAAAG

Downstream 100 bases:

>100_bases
AATGAACGAGGCGGACGCTCTCGATATTGTCCAATATGCGATTTGGACAGTGCTTCTGGCGTCCGGCCCGGCCGTGATCG
TCGCCATGGTCGTCGGTGTC

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Hook Capping Protein; FlgD Protein; Basal-Body Rod Protein; Flagellar Basal-Body Rod Protein FlgD; Flagellar Basal-Body Rod Protein; Flagellar Basal-Body Rod Protein

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNVSTVTSTPQNQQTASAPQTVDYQSFLRLLVAQMKNQDPTSPMESTDYVAQLATFSQVEQSVQMNSKLEQILAASALSQ
AGGVIGREITSADGSVTGIVKEVKLYSDGVIAKLESGQEVVVGPGVVIS

Sequences:

>Translated_129_residues
MNVSTVTSTPQNQQTASAPQTVDYQSFLRLLVAQMKNQDPTSPMESTDYVAQLATFSQVEQSVQMNSKLEQILAASALSQ
AGGVIGREITSADGSVTGIVKEVKLYSDGVIAKLESGQEVVVGPGVVIS
>Mature_129_residues
MNVSTVTSTPQNQQTASAPQTVDYQSFLRLLVAQMKNQDPTSPMESTDYVAQLATFSQVEQSVQMNSKLEQILAASALSQ
AGGVIGREITSADGSVTGIVKEVKLYSDGVIAKLESGQEVVVGPGVVIS

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13577; Mature: 13577

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSTVTSTPQNQQTASAPQTVDYQSFLRLLVAQMKNQDPTSPMESTDYVAQLATFSQVE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QSVQMNSKLEQILAASALSQAGGVIGREITSADGSVTGIVKEVKLYSDGVIAKLESGQEV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCEE
VVGPGVVIS
EECCCEEEC
>Mature Secondary Structure
MNVSTVTSTPQNQQTASAPQTVDYQSFLRLLVAQMKNQDPTSPMESTDYVAQLATFSQVE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QSVQMNSKLEQILAASALSQAGGVIGREITSADGSVTGIVKEVKLYSDGVIAKLESGQEV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCEE
VVGPGVVIS
EECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA