Click here to switch to the map view.

The map label for this gene is flbT

Identifier: 110632636

GI number: 110632636

Start: 313757

End: 314194

Strand: Reverse

Name: flbT

Synonym: Meso_0275

Alternate gene names: 110632636

Gene position: 314194-313757 (Counterclockwise)

Preceding gene: 110632637

Following gene: 110632635

Centisome position: 7.12

GC content: 56.85

Gene sequence:

>438_bases
ATGAAAAACACGTTCAGGATTTCGCTCAAGGCAGGCGAAAAGATCTATGTGAACGGGGCGGTGATCAAGGTCGACCGCAA
GGTCTCGCTGGAGTTCCTTAACGACGTCCAGTTCTTGCTCCAGCAGCACGTGCTCCAGCCGGAGGATGCCAACACTCCGC
TGCGCCAGCTTTACTTCATCGTGCAGGTGATGCTGATGGGCCCCGAAGGCGCGGATAAGACGAGGCCGCTCCTCAAGGAC
ATGCTGGACAACCTGCTTGCCACCTTCCGTAACGAGCGGATTCTTGCTGGCCTCAAGCATGTCGACTCGCTTGTCTGTGA
AGGCCAGATTTATGAGGCGCTGAAGGCGATCCGGGCGCTCTATCCGATTGAGGAAGAGATTCTCTCGGCAGGGCGCCAGC
AGGAACAAGCCATATTCGCCAAGGCCGTGGGAGAATAA

Upstream 100 bases:

>100_bases
GTCTTTGGCTCCTACGTGAGGGCGAAGAGGTGCGGCAGGGCCGCTCCGACAATTTCGACGGGCTCATCGAAATTTCGCAA
ATCATACGCGACGGCTTGCG

Downstream 100 bases:

>100_bases
AGATGAATGTCTCGACCGTGACGTCAACTCCGCAAAACCAGCAGACGGCGTCGGCCCCGCAGACGGTGGACTATCAGTCT
TTCCTTCGGCTGCTCGTCGC

Product: flagellar biosynthesis repressor FlbT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKNTFRISLKAGEKIYVNGAVIKVDRKVSLEFLNDVQFLLQQHVLQPEDANTPLRQLYFIVQVMLMGPEGADKTRPLLKD
MLDNLLATFRNERILAGLKHVDSLVCEGQIYEALKAIRALYPIEEEILSAGRQQEQAIFAKAVGE

Sequences:

>Translated_145_residues
MKNTFRISLKAGEKIYVNGAVIKVDRKVSLEFLNDVQFLLQQHVLQPEDANTPLRQLYFIVQVMLMGPEGADKTRPLLKD
MLDNLLATFRNERILAGLKHVDSLVCEGQIYEALKAIRALYPIEEEILSAGRQQEQAIFAKAVGE
>Mature_145_residues
MKNTFRISLKAGEKIYVNGAVIKVDRKVSLEFLNDVQFLLQQHVLQPEDANTPLRQLYFIVQVMLMGPEGADKTRPLLKD
MLDNLLATFRNERILAGLKHVDSLVCEGQIYEALKAIRALYPIEEEILSAGRQQEQAIFAKAVGE

Specific function: Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation

COG id: COG5443

COG function: function code N; Flagellar biosynthesis regulator FlbT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flbT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLBT_MESSB (Q11LP6)

Other databases:

- EMBL:   CP000390
- RefSeq:   YP_672844.1
- STRING:   Q11LP6
- GeneID:   4182835
- GenomeReviews:   CP000390_GR
- KEGG:   mes:Meso_0275
- NMPDR:   fig|266779.1.peg.3432
- eggNOG:   COG5443
- HOGENOM:   HBG660673
- OMA:   MILINPE
- ProtClustDB:   PRK00794
- BioCyc:   MSP266779:MESO_0275-MONOMER
- HAMAP:   MF_00783
- InterPro:   IPR009967
- InterPro:   IPR016006
- PIRSF:   PIRSF009533

Pfam domain/function: PF07378 FlbT

EC number: NA

Molecular weight: Translated: 16412; Mature: 16412

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTFRISLKAGEKIYVNGAVIKVDRKVSLEFLNDVQFLLQQHVLQPEDANTPLRQLYFI
CCCEEEEEEECCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VQVMLMGPEGADKTRPLLKDMLDNLLATFRNERILAGLKHVDSLVCEGQIYEALKAIRAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
YPIEEEILSAGRQQEQAIFAKAVGE
CCHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKNTFRISLKAGEKIYVNGAVIKVDRKVSLEFLNDVQFLLQQHVLQPEDANTPLRQLYFI
CCCEEEEEEECCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VQVMLMGPEGADKTRPLLKDMLDNLLATFRNERILAGLKHVDSLVCEGQIYEALKAIRAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
YPIEEEILSAGRQQEQAIFAKAVGE
CCHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA