Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632599
Identifier: 110632599
GI number: 110632599
Start: 267998
End: 269866
Strand: Direct
Name: 110632599
Synonym: Meso_0238
Alternate gene names: NA
Gene position: 267998-269866 (Clockwise)
Preceding gene: 110632598
Following gene: 110632600
Centisome position: 6.07
GC content: 61.0
Gene sequence:
>1869_bases ATGGTGAACCCGATCGCTCAGGCCCTCCAGCCTCTACAGCCTTTCATCTGGGGGCGGGGAGGGGCAAAGCTCACCCCGGA ACAGATTGCCCGCGAGCGCGAGATTGCCGAAGCTCTGGGCGTGGTCGATACCTCTCCAGTGGATCACTGGCTTCAGGGCG CGGCGCGTATGGCGAACACGCTCACCGGTCGCATCCGTGAGGGTAGGGCAGACAGAGCCGAGCGGGAAAACCAGGCATTC AATGAGGACATCGTAAGCAGCCTGTTGGGTAGCGTTGGTGGAACCACCACGCCCGCGCCTACAAGCCCCGCCGCACAGCC GTTGGACTATGCCTCTCAGCGTGTCTCACAAGCCCATGGCGACATGGGAGCCTACCGGAACGCCATTGCCTCTATTGAGA GCGCTGGAAGCGGCGATTATCAGGCTGTAGGCCCCGCTCACCCGACGCTTGGCCGCGCCTTGGGCCGCTATCAGGTCATG GAGGCGAATGTCGGACCCTGGACGGAAAAGCACCTTGGCCGCAGGCTCACGCCTGAGGAATTCCTTGCCAGTCCAGAGGC GCAGGATGCCGTCTTCGACGGTGAGTTCGGTAGCTATGTTCAGCGTTTCGGAGATCCAGCCATTGCCGCCCAGGCATGGT TCGCTGGTCCCGGTGGGGTTGGCACAGAGCGGCAGGACTCCCTTGGGACGAGCGTCCCCGAATACGCGCAGAAGTTCACG ACCGCCCTTGGAAGAACACCAGCGCAGGGTGGTATTCAAGCACAGCTTGAGAGCCTGCCTGTTGGCGGCTCCATGACGAT GCCGCGTGGCTCCACAAGCCCTGTGGCGGCAGCGCTTGCGATGCAACCTGGCGCGTCTCTCCCGAGAACTGCGACCCCAG GTTCTATTACGCGCGGTCCTGATGGGCAAACGTATCAGTACGTGGAAACAAGAGGAATGGCCGGGGCGCAGGGTGATTAT GGGTGGAAACCTGTCAACACCGGTAGTGCACAGACTGCGCAGGCCGGTGGTATCAATCCTGCCATTATCGAGGCCCTTTC CAGCCCATACGCCAACGAGGGCACGCGCCGAATTGCGGCGTTGTTGCTCGAGCAGCAGATGCAGCCACGCGAGGCACAAC CGCTCATCAACGCGGGTGACGGCAGGCTTTATGACCCGAATACCGGGCAATGGGTGATAGCTCCGCAAGGTGAGCCGCAA CTGCCGGAATCTGCACAGACCCTCCAGTGGCGCGCTCAGCAGGCCGGTCTCGTGCCGGGTACGCCTGAGTATAATGAGTT CATGATTTCGGGTGGTCGCGGCGGTACTTCGCTAAGCATTGGCCCTGACGGCACGGTTCAGTTCTCTCAGGGAAATGCAG CGCGACCGTTAACTGAAGCTCAGTCGAAGGATGCGGTCTATGCCACAAGGGCAGAGGGCGCGCTTGGGACGCTGGACCAG TTTGATACAGCACTGACAAGCGCGTCCGAGCGTGTAGCGGAGTATGACCCGACTGGCGTCGTTCGCGGCATGCAATCCGA GGAGTTCCAAAAAGCTCAACAGGCCGGACTTGAGTTCTTGCAGGCCATTTTGCGCAAGGATACTGGCGCGGCAATAGCAA AGGAAGAACTGGATCAGTACGGGCGTACATATCTTCCGCAGCCGGGGGACGGCCCTGCTGTTCTAGAGCAAAAACGCATG GCGCGCAGGCGCGCTCTGGAAGCACTTAAGGCTGGCATGGCTCCGCAGGCTATTCTCAACCAGGAAAAGGCACTGGAGCA ATCGTCTGTGCAACCCGCGCCAGGTTCAGGCGCAACGGGAGTTCCTGCCGGGGTTGATCCTGCCGATTGGCAATACATGA CGCCGGAAGAAAGGGCGCTGTTCCAATGA
Upstream 100 bases:
>100_bases TCAAGGTCTGGCATATCGGCGTCATGGCGCAGGAAGTGCCCGAGGCTCGTGTGTCGGACGAGAGTGGGTTCTTCCGCGTT GATTACGGGAGGGTCCACTA
Downstream 100 bases:
>100_bases CGCCAGAGCAGCAGAGAGCGATTGCGATAGCGCGAGCACGCAGGCGTCGAGCCGCAGAACAGTCCGTGCGTCATCCCGAG TTCGATGGTTCGGACATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANTLTGRIREGRADRAERENQAF NEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHGDMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVM EANVGPWTEKHLGRRLTPEEFLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGPDGQTYQYVETRGMAGAQGDY GWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAALLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQ LPESAQTLQWRAQQAGLVPGTPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQYGRTYLPQPGDGPAVLEQKRM ARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATGVPAGVDPADWQYMTPEERALFQ
Sequences:
>Translated_622_residues MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANTLTGRIREGRADRAERENQAF NEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHGDMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVM EANVGPWTEKHLGRRLTPEEFLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGPDGQTYQYVETRGMAGAQGDY GWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAALLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQ LPESAQTLQWRAQQAGLVPGTPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQYGRTYLPQPGDGPAVLEQKRM ARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATGVPAGVDPADWQYMTPEERALFQ >Mature_622_residues MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANTLTGRIREGRADRAERENQAF NEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHGDMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVM EANVGPWTEKHLGRRLTPEEFLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGPDGQTYQYVETRGMAGAQGDY GWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAALLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQ LPESAQTLQWRAQQAGLVPGTPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQYGRTYLPQPGDGPAVLEQKRM ARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATGVPAGVDPADWQYMTPEERALFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65720; Mature: 65720
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANT CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LTGRIREGRADRAERENQAFNEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC DMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVMEANVGPWTEKHLGRRLTPEE HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHCCCCCHHH FLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT HHCCCCHHHCEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHH TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGP HHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC DGQTYQYVETRGMAGAQGDYGWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAA CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH LLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQLPESAQTLQWRAQQAGLVPG HHHHHHCCCCCCCCCEECCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC TPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ CCCCCCEEEECCCCCCEEEECCCCCEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCHHH FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQY HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GRTYLPQPGDGPAVLEQKRMARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC VPAGVDPADWQYMTPEERALFQ CCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANT CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LTGRIREGRADRAERENQAFNEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC DMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVMEANVGPWTEKHLGRRLTPEE HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHCCCCCHHH FLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT HHCCCCHHHCEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHH TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGP HHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC DGQTYQYVETRGMAGAQGDYGWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAA CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH LLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQLPESAQTLQWRAQQAGLVPG HHHHHHCCCCCCCCCEECCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC TPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ CCCCCCEEEECCCCCCEEEECCCCCEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCHHH FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQY HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GRTYLPQPGDGPAVLEQKRMARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC VPAGVDPADWQYMTPEERALFQ CCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA