Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632600
Identifier: 110632600
GI number: 110632600
Start: 269863
End: 271920
Strand: Direct
Name: 110632600
Synonym: Meso_0239
Alternate gene names: NA
Gene position: 269863-271920 (Clockwise)
Preceding gene: 110632599
Following gene: 110632601
Centisome position: 6.12
GC content: 62.05
Gene sequence:
>2058_bases ATGACGCCAGAGCAGCAGAGAGCGATTGCGATAGCGCGAGCACGCAGGCGTCGAGCCGCAGAACAGTCCGTGCGTCATCC CGAGTTCGATGGTTCGGACATCCCAGGCTACAACCCTGAAACTGGTCTGGTCGAGCGCCAATATGGAATGGGCGATTCCG CCCTCCTTGGTGCTGCTGATACAGCGACCATTGGTTTCGGGGACGAAGGCGGTGCGGGTCTCGTCTGGGGAATCGAGAAG CTGCGGGGCAATGATCCTGAGTATTCCGAGATACTTCAGGACGTTCGCCAGATGCAGACCGATGCACAGGCACAGAACCC CAAGTCATACCTGACCGGGCAGGTGGTTGGCGGTGTGGCGCAGGGCGTTGCAACTGCTCCCGCGAGCCTGACGGTAAATG CCACAAGGGCAGGGGCTCCGCTTCTCGGGCGTGTTGCAGCCGGTATGGCCGATGGCTCTGTCTTCGGCGGCCTTTACGGA CTCGGTTCCGGGGAAGGGACACAGGGGCGACTTACGGAAGGCGCAATTGGCGCGGGTATTGGCGTCGTAGCCGGTGCAGC GTTCCCGCTGTTGGGCACGGGGGCTTCTCGCGCTTATGAAGCGGGCCGCAATTACCTTGCCGCAAGACCCATCGCTGAAG GTGCTGGGGCCTCCCCGGAAGCACTACGCCTCCTCGGCGGCGTCATCGACGCGGATGGTTCCCTTGGCCCGCGAGGGCAG GCGAATATGCGAGCTGCTGGCCGTGAGGCGATGTTGGTGGATGCCGGCCCTACGGCGCGAGGGATGCTTGACACGGCCAT CCAGCGCAGCGGTCCAGGGTCCATTGTCGCAACAGACCGCGTTTCCGCTCGCGTGGCGCGGGATGCTCAGGCGCTTACCG GAACCCTGGATAACACCTTGGGAGCACCGCAAGGGGTAGGTTCGGCGCAGAACGCTATCCGTGATGCTGCCCAGCCTCAG GTCAGCCAGGCATACCAGCGCGCCTACGCCACGCCCATTGATTATGCGTCACCGGCTGGGCAAGCAGTAGAAGACGTGAT TAGCCGCATTCCGCCTCGGATTGCCCGCACTGCGATTGAGCGCGCGAACGAGATAATGCGCTATGATCGGATGCCGCGTC AGATCATGGCAGATATTGCGGATGATGGTTCGATCTCGTTCCGCGAAATGCCGAGTGTGGTGCAGGCTGACTACATCAAA AAGGCGCTCGACCAGATTGCCCAAGATGGCGTGGATCCGATCACAGGGCGCATGGACAGCAATGCAGCCTTTGCCTCGCG TATCGCGCGCGACCTTCGCAATGCGGTGGGGGATGCTGTCCCGGCCTATCGTCAAGCCCTTGAGACAGCGGCTGACCCCC TAAGCAGGCAAAACGCGGTGCGCATCGGCGCTCGCCTCAACAGCATGACGCGCGATGAGTTCCGAATGGCCGTTGAGGGC ATGACGCAGCCGGAGAAGCAGGCGGTCTTGCAGGGCTTTCGGTCCAAGATCGATGATCAGATGGCGGCGGTCACACGTGC CATGTCTGACGGCGAGATGGATGCACGGGAGGCCATCAAGGGGCTTCGTGAACTGTCCAGCCGGCGCACTCGCGAGAATA TCTCGGCAATCCTGCCGGAGAACGAAGCCGAAGCGCTGTTCAATGAGATCGACCGCATCACGCGCTCGTTTGAACTCCGC GCCTCTGTGGCGGACAACAGCCGCACCTATGCCCGACAGGCCATGGATGAGCGTGTGCGCGATCTGACCGCTCCTGGCGT TGTAAGGACAGCGGCGCGCGGTGAACCGATCAATGCCACGCAGCGCGTCATTCAGGCGCTCACGGGGCAAACCGATGAAG CCATGCGCTCTCGTCAGGATGCCATCTATGCGGAGATTGCCGACCTCCTCACGAGGCAGGGCGGTGCGGGTCAGAGCATA TACGACGCCACGAACCGGATAGGTCGGACTGATATCGCCACGCAACTTATCGCTGATCGAATCGCCCGTGGGCTTTCCGG CCCCGGGGCTTTCTATCCATCCACATCGCTAGCAATAGACAACCGACCATTCCGCTGA
Upstream 100 bases:
>100_bases CTGTGCAACCCGCGCCAGGTTCAGGCGCAACGGGAGTTCCTGCCGGGGTTGATCCTGCCGATTGGCAATACATGACGCCG GAAGAAAGGGCGCTGTTCCA
Downstream 100 bases:
>100_bases CGCAGAGGCCCAGGAAGGCATAGAGCGGCATCTTTTCAGAGAGGCTGCCGAGGACCCAGACGATAGCGGCGGTTCCGATA ATCGCGATCACTGTTCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MTPEQQRAIAIARARRRRAAEQSVRHPEFDGSDIPGYNPETGLVERQYGMGDSALLGAADTATIGFGDEGGAGLVWGIEK LRGNDPEYSEILQDVRQMQTDAQAQNPKSYLTGQVVGGVAQGVATAPASLTVNATRAGAPLLGRVAAGMADGSVFGGLYG LGSGEGTQGRLTEGAIGAGIGVVAGAAFPLLGTGASRAYEAGRNYLAARPIAEGAGASPEALRLLGGVIDADGSLGPRGQ ANMRAAGREAMLVDAGPTARGMLDTAIQRSGPGSIVATDRVSARVARDAQALTGTLDNTLGAPQGVGSAQNAIRDAAQPQ VSQAYQRAYATPIDYASPAGQAVEDVISRIPPRIARTAIERANEIMRYDRMPRQIMADIADDGSISFREMPSVVQADYIK KALDQIAQDGVDPITGRMDSNAAFASRIARDLRNAVGDAVPAYRQALETAADPLSRQNAVRIGARLNSMTRDEFRMAVEG MTQPEKQAVLQGFRSKIDDQMAAVTRAMSDGEMDAREAIKGLRELSSRRTRENISAILPENEAEALFNEIDRITRSFELR ASVADNSRTYARQAMDERVRDLTAPGVVRTAARGEPINATQRVIQALTGQTDEAMRSRQDAIYAEIADLLTRQGGAGQSI YDATNRIGRTDIATQLIADRIARGLSGPGAFYPSTSLAIDNRPFR
Sequences:
>Translated_685_residues MTPEQQRAIAIARARRRRAAEQSVRHPEFDGSDIPGYNPETGLVERQYGMGDSALLGAADTATIGFGDEGGAGLVWGIEK LRGNDPEYSEILQDVRQMQTDAQAQNPKSYLTGQVVGGVAQGVATAPASLTVNATRAGAPLLGRVAAGMADGSVFGGLYG LGSGEGTQGRLTEGAIGAGIGVVAGAAFPLLGTGASRAYEAGRNYLAARPIAEGAGASPEALRLLGGVIDADGSLGPRGQ ANMRAAGREAMLVDAGPTARGMLDTAIQRSGPGSIVATDRVSARVARDAQALTGTLDNTLGAPQGVGSAQNAIRDAAQPQ VSQAYQRAYATPIDYASPAGQAVEDVISRIPPRIARTAIERANEIMRYDRMPRQIMADIADDGSISFREMPSVVQADYIK KALDQIAQDGVDPITGRMDSNAAFASRIARDLRNAVGDAVPAYRQALETAADPLSRQNAVRIGARLNSMTRDEFRMAVEG MTQPEKQAVLQGFRSKIDDQMAAVTRAMSDGEMDAREAIKGLRELSSRRTRENISAILPENEAEALFNEIDRITRSFELR ASVADNSRTYARQAMDERVRDLTAPGVVRTAARGEPINATQRVIQALTGQTDEAMRSRQDAIYAEIADLLTRQGGAGQSI YDATNRIGRTDIATQLIADRIARGLSGPGAFYPSTSLAIDNRPFR >Mature_684_residues TPEQQRAIAIARARRRRAAEQSVRHPEFDGSDIPGYNPETGLVERQYGMGDSALLGAADTATIGFGDEGGAGLVWGIEKL RGNDPEYSEILQDVRQMQTDAQAQNPKSYLTGQVVGGVAQGVATAPASLTVNATRAGAPLLGRVAAGMADGSVFGGLYGL GSGEGTQGRLTEGAIGAGIGVVAGAAFPLLGTGASRAYEAGRNYLAARPIAEGAGASPEALRLLGGVIDADGSLGPRGQA NMRAAGREAMLVDAGPTARGMLDTAIQRSGPGSIVATDRVSARVARDAQALTGTLDNTLGAPQGVGSAQNAIRDAAQPQV SQAYQRAYATPIDYASPAGQAVEDVISRIPPRIARTAIERANEIMRYDRMPRQIMADIADDGSISFREMPSVVQADYIKK ALDQIAQDGVDPITGRMDSNAAFASRIARDLRNAVGDAVPAYRQALETAADPLSRQNAVRIGARLNSMTRDEFRMAVEGM TQPEKQAVLQGFRSKIDDQMAAVTRAMSDGEMDAREAIKGLRELSSRRTRENISAILPENEAEALFNEIDRITRSFELRA SVADNSRTYARQAMDERVRDLTAPGVVRTAARGEPINATQRVIQALTGQTDEAMRSRQDAIYAEIADLLTRQGGAGQSIY DATNRIGRTDIATQLIADRIARGLSGPGAFYPSTSLAIDNRPFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72514; Mature: 72383
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEQQRAIAIARARRRRAAEQSVRHPEFDGSDIPGYNPETGLVERQYGMGDSALLGAAD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHCCCCCCHHCCCCC TATIGFGDEGGAGLVWGIEKLRGNDPEYSEILQDVRQMQTDAQAQNPKSYLTGQVVGGVA CCEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QGVATAPASLTVNATRAGAPLLGRVAAGMADGSVFGGLYGLGSGEGTQGRLTEGAIGAGI HHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHH GVVAGAAFPLLGTGASRAYEAGRNYLAARPIAEGAGASPEALRLLGGVIDADGSLGPRGQ HHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC ANMRAAGREAMLVDAGPTARGMLDTAIQRSGPGSIVATDRVSARVARDAQALTGTLDNTL CCHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHC GAPQGVGSAQNAIRDAAQPQVSQAYQRAYATPIDYASPAGQAVEDVISRIPPRIARTAIE CCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH RANEIMRYDRMPRQIMADIADDGSISFREMPSVVQADYIKKALDQIAQDGVDPITGRMDS HHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NAAFASRIARDLRNAVGDAVPAYRQALETAADPLSRQNAVRIGARLNSMTRDEFRMAVEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MTQPEKQAVLQGFRSKIDDQMAAVTRAMSDGEMDAREAIKGLRELSSRRTRENISAILPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NEAEALFNEIDRITRSFELRASVADNSRTYARQAMDERVRDLTAPGVVRTAARGEPINAT CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHH QRVIQALTGQTDEAMRSRQDAIYAEIADLLTRQGGAGQSIYDATNRIGRTDIATQLIADR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH IARGLSGPGAFYPSTSLAIDNRPFR HHHCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure TPEQQRAIAIARARRRRAAEQSVRHPEFDGSDIPGYNPETGLVERQYGMGDSALLGAAD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHCCCCCCHHCCCCC TATIGFGDEGGAGLVWGIEKLRGNDPEYSEILQDVRQMQTDAQAQNPKSYLTGQVVGGVA CCEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QGVATAPASLTVNATRAGAPLLGRVAAGMADGSVFGGLYGLGSGEGTQGRLTEGAIGAGI HHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHH GVVAGAAFPLLGTGASRAYEAGRNYLAARPIAEGAGASPEALRLLGGVIDADGSLGPRGQ HHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC ANMRAAGREAMLVDAGPTARGMLDTAIQRSGPGSIVATDRVSARVARDAQALTGTLDNTL CCHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHC GAPQGVGSAQNAIRDAAQPQVSQAYQRAYATPIDYASPAGQAVEDVISRIPPRIARTAIE CCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH RANEIMRYDRMPRQIMADIADDGSISFREMPSVVQADYIKKALDQIAQDGVDPITGRMDS HHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NAAFASRIARDLRNAVGDAVPAYRQALETAADPLSRQNAVRIGARLNSMTRDEFRMAVEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MTQPEKQAVLQGFRSKIDDQMAAVTRAMSDGEMDAREAIKGLRELSSRRTRENISAILPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NEAEALFNEIDRITRSFELRASVADNSRTYARQAMDERVRDLTAPGVVRTAARGEPINAT CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHH QRVIQALTGQTDEAMRSRQDAIYAEIADLLTRQGGAGQSIYDATNRIGRTDIATQLIADR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH IARGLSGPGAFYPSTSLAIDNRPFR HHHCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA