Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632587
Identifier: 110632587
GI number: 110632587
Start: 257720
End: 258541
Strand: Direct
Name: 110632587
Synonym: Meso_0226
Alternate gene names: NA
Gene position: 257720-258541 (Clockwise)
Preceding gene: 110632586
Following gene: 110632588
Centisome position: 5.84
GC content: 57.06
Gene sequence:
>822_bases ATGGCTGTAGGTGGAATCCCGGTCGTCATTGTTCCAAACGGCTCTCCAGTCTCTCCCGGCGCTCTTGGTATTCCCGTCAC CATTGTTGGCGGTAACGGTGCTGCAGCCGTTCAGGACGGCCAGACAGTCGCCATGGAGGATGGCAGCGGTAACAGCCTTG GTAATGGCACTATCCACATAGATGCTAACGGCAATGTCACCGTTGACTGGCCAGGTGGTGGTTCTGGCACACCTCTTGAA GACGGCGAACCCGTCAATCTCGATAGCCATGACGGCAATACCATTCTTGCATCGACCGTCGCGCGCGTGGCCGATGGAAA CCTTGTCGGCGTGCTTCTCCCTCAAAATTACGCGGTCATTCAAGATGGCGTAGGCAATTTCGATATTGCGAACTACGGCT CCGGCCAGGGTGCGGTAGCGGTCATTGCTCGTGTGTCGAATAACGAACCTGGCGTGCAGCTTGCCAACTCCACCACGAAA ATCGCCATCAATGCGGCTCCTGTTTCGATCACGGCAGGTGGCAAAACCGTAGGCGCAACAATCGCCGTGGATCAAGGCGA ATGGCAAGCCTTTCCATTGACGGATGCGACAGACGCCATTGTCGAAACGTCCGATACCATCCCGGTTATCGATATGGGCG GCTCCAATGAGGATGCCGTAGTGGTGGTGGACAACCATGTTGTTCTGCACGCGCTTTTGGCCCCGAACCGCTGCATAGCG CACGACCAGCAGGCGCTCCAGATCCCGGTGACGGGGACATACACGGATACGGCCACGCTCACTGTGGCGAACGGCGTCAT AACCGGAATTACACTCAGCTAG
Upstream 100 bases:
>100_bases ACGGTCAGAGAGCCGACAGGCAGCAGGATTTCACCGAGCGCAGCAGTGATCGGCAGATGAGCCTTGCTGAACGGCAAGCA GAACGTGAGGGAGCCGAATA
Downstream 100 bases:
>100_bases GAGAAATACCAATGTCAGACGTGCGCAGGCTTGTAGAGCTGGGCATGGTGCCCCCGCTCGCCAAGGAAGTAGCAACACAG ATCGATGCGGCAGGTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MAVGGIPVVIVPNGSPVSPGALGIPVTIVGGNGAAAVQDGQTVAMEDGSGNSLGNGTIHIDANGNVTVDWPGGGSGTPLE DGEPVNLDSHDGNTILASTVARVADGNLVGVLLPQNYAVIQDGVGNFDIANYGSGQGAVAVIARVSNNEPGVQLANSTTK IAINAAPVSITAGGKTVGATIAVDQGEWQAFPLTDATDAIVETSDTIPVIDMGGSNEDAVVVVDNHVVLHALLAPNRCIA HDQQALQIPVTGTYTDTATLTVANGVITGITLS
Sequences:
>Translated_273_residues MAVGGIPVVIVPNGSPVSPGALGIPVTIVGGNGAAAVQDGQTVAMEDGSGNSLGNGTIHIDANGNVTVDWPGGGSGTPLE DGEPVNLDSHDGNTILASTVARVADGNLVGVLLPQNYAVIQDGVGNFDIANYGSGQGAVAVIARVSNNEPGVQLANSTTK IAINAAPVSITAGGKTVGATIAVDQGEWQAFPLTDATDAIVETSDTIPVIDMGGSNEDAVVVVDNHVVLHALLAPNRCIA HDQQALQIPVTGTYTDTATLTVANGVITGITLS >Mature_272_residues AVGGIPVVIVPNGSPVSPGALGIPVTIVGGNGAAAVQDGQTVAMEDGSGNSLGNGTIHIDANGNVTVDWPGGGSGTPLED GEPVNLDSHDGNTILASTVARVADGNLVGVLLPQNYAVIQDGVGNFDIANYGSGQGAVAVIARVSNNEPGVQLANSTTKI AINAAPVSITAGGKTVGATIAVDQGEWQAFPLTDATDAIVETSDTIPVIDMGGSNEDAVVVVDNHVVLHALLAPNRCIAH DQQALQIPVTGTYTDTATLTVANGVITGITLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27107; Mature: 26976
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGGIPVVIVPNGSPVSPGALGIPVTIVGGNGAAAVQDGQTVAMEDGSGNSLGNGTIHI CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEE DANGNVTVDWPGGGSGTPLEDGEPVNLDSHDGNTILASTVARVADGNLVGVLLPQNYAVI ECCCCEEEEECCCCCCCCCCCCCCCEECCCCCCEEHEEHHHHHCCCCEEEEEECCCEEEE QDGVGNFDIANYGSGQGAVAVIARVSNNEPGVQLANSTTKIAINAAPVSITAGGKTVGAT ECCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEEECCEEEEECCCEEEEE IAVDQGEWQAFPLTDATDAIVETSDTIPVIDMGGSNEDAVVVVDNHVVLHALLAPNRCIA EEEECCCEEEECCCCCCHHEEECCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCEEC HDQQALQIPVTGTYTDTATLTVANGVITGITLS CCCCEEEEEEECCCCCCEEEEEECCEEEEEEEC >Mature Secondary Structure AVGGIPVVIVPNGSPVSPGALGIPVTIVGGNGAAAVQDGQTVAMEDGSGNSLGNGTIHI CCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEE DANGNVTVDWPGGGSGTPLEDGEPVNLDSHDGNTILASTVARVADGNLVGVLLPQNYAVI ECCCCEEEEECCCCCCCCCCCCCCCEECCCCCCEEHEEHHHHHCCCCEEEEEECCCEEEE QDGVGNFDIANYGSGQGAVAVIARVSNNEPGVQLANSTTKIAINAAPVSITAGGKTVGAT ECCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEEECCEEEEECCCEEEEE IAVDQGEWQAFPLTDATDAIVETSDTIPVIDMGGSNEDAVVVVDNHVVLHALLAPNRCIA EEEECCCEEEECCCCCCHHEEECCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCEEC HDQQALQIPVTGTYTDTATLTVANGVITGITLS CCCCEEEEEEECCCCCCEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA