Definition | Mesorhizobium sp. BNC1, complete genome. |
---|---|
Accession | NC_008254 |
Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110632586
Identifier: 110632586
GI number: 110632586
Start: 255336
End: 257720
Strand: Direct
Name: 110632586
Synonym: Meso_0225
Alternate gene names: NA
Gene position: 255336-257720 (Clockwise)
Preceding gene: 110632585
Following gene: 110632587
Centisome position: 5.79
GC content: 58.03
Gene sequence:
>2385_bases ATGGCTGACGCTCTCGAAACAGAATACGCCGATACGCTTGAGGTCGAGAACGACCCTAAGTCGTCCGCGCGTGTTCTGGC GGCGATCAAGAAGGCAGAGCGCGCCCTTAACGACTGGCAGGCACTTTGCGACCGCATTGACGACATCTATTCGCGGCGTG AGCTTTATAGCGAAGACTGGATAGACCCGGACTATGATTTGTTCTGGGCGTCCATGGAGATTATGAAGCCCGCAGTCTAT GCGCGGCCTCCTGTTCCTGTCGTCTCGCCACAGTTTAAGGACCGGCGCAAGCTTCAGAACGTCACGGCTGAGCTTCTGGA GCGGTCTGTCATATCGGGCTTTGACCGCACGTGCATTGACGAGGCGATGTGCTGCACCCGGGATGACCTGATTTTCTACA ATCGCGGTCAGCTATGGCTCACCTATGAGACCGACGAGAAGGGCGGCGGTCAGCGCGTTGTTGTCGATCACGTAGACCGC AAGGACTTCCTACATCCTCCGGCGCGCAAATGGTCTGAGGTGCCTTGGGTCGCGAAACGAGCCTGGATGACCAAATCGGA GATGCGCAAGCGTTTCCGTAAGACATCCGGCGATGCCTATATGGATGCGAAACTGGCAACACCCAGCCCTCAGCAGCGTG ACGATGACGGCGGGGCAGACCACAGCAAGAAGGCTGGTGTCTGGGAGGTCTGGCACAAGCGCGATAACCGCGTCTATTGG GTGGCGGAAGGCGTTTCCGTCATGTTGGACGAGGGCGAGCCGCACCTGAAGCTTCGCGGCTTCTTTCCTTGCCCCAGGCC AGCCTATGGCACACTGCGGCCTCGCACACTTGTTCCAGTACCGGATTATCTTCGGTATGCAGGTCACTTCAAGAAAATCG ACAGTCTGACGCGGCGCATCTACGCATTGCTTGATATGGTCCGCATGAAGGGCCTTATCCCGGCAGGTGGTGACGTTGGA GACACGGTAGAGGAGCTGCTGCGCAATGATAGCGACACAGCCATGCTGGTCCCTGTCCCTCAGGCTGCATTAACCTCGGG CACTGGGGATTTCGTCCAGTGGATGCCCCTTGCTGAACTGGCTCAGGCCATTCAGGGGCTTATTGAGGCCAGAAGGGAGC TTTTCTCCGATTACGACCGTCTTTCCGGCATTTCCGACATCATGCGCGGCGAGACCGAAGCGGATGAGACGCTTGGTGCC CAGCAGCTCAAAAGCCAGTATGGGAGCGTACGTGTTCGCGAGAAGATTGACGAGCTTCAGCGCATTGCCCGCGATGTGAC GCAGATCGCCGCTGAGATCATGGCGGACAACTTCAGCCGGGATACCCTGCTCGAAATGAGCCAGATGGAGATTCCGACAA AGGATGATATCGAGAAGCGCGTTCAGGAAATCGAGAACGCTGCCGAAGAAGAAATGAACAAGCTGGGTGAACAGGCCAGA CAGGCCATGCAGCAAGCCCAGCAGTCCGGTCAGCAGCCCGACCCCAATCAGACCAAGCAGCAGCTTCAGCAGGCTCAGCA GCAAATCGTCGGGAAGTATGGCCCGATGCTGAAGGAAGCCAGTGAACAGGTGCCTATCGAAGACGTGATGGATCTGCTTC GCAATGACAAGGCGCGCGGCTTCGCCTTCGAGGTGGCGACGGACAGCACCATTCTTACCGACGAGCTTCAGGAGAAGCAG CAGCGCAATGAATTCCTGACAGTCTTTACCGGCGCGTCCCGGGGCCTGATTGCGTTGGCTGGCATGGGTGAGCCCGCCGC GAAATTGGCAGGTGAGGTGCTTAAGTTCGTGCTCCAGCCATATCGCGTTGGTCGTGAGCTTAACAGCGTCATTGATGAGT TCATCGATTCCGCTCCGCAGATGGCCCAAGCGGTTCAGGGCGGGGAGGGCGGCGAGGCTGAGAAGGCCATAGCAGAGGCC AACGCCAAGATTGCCGAAGCGGAGCTTGGAAAGGCGCAAGCGGCTATTAAGAAGGTCGATGCAGACACGCAGCTAAAGAC TTTTGAGCTTCAGCAGAAGCAGCAAGCCGCTGCGGTTGAGGCCCAGCAGGATCGCGAGCGCTTCCAACTGGAGATTGCCG ATACTCAGGGCAAACTCAAGGAGACGGCGGCCCGCATTGATAAGATTATGGCGGAAATACGGAAAATGGGCGTCGACGCT CAGAACCAGACGCGCAAGGAAGACCGCGAGGACTTCAAGGCCACGACTGAAGTGCAGATGCGCGCCACTGATCAAGCCAT GCAGGCGGAGAACGCCGAGCGTGAAGCGGCCTTTCGCGCACAAGACGGTCAGAGAGCCGACAGGCAGCAGGATTTCACCG AGCGCAGCAGTGATCGGCAGATGAGCCTTGCTGAACGGCAAGCAGAACGTGAGGGAGCCGAATAA
Upstream 100 bases:
>100_bases TCTCGTCCTTCTGGACATTTTGCGGCAGCGTGATCCTGCTTTGGATTGTCGTGATGCCTTTTCTTGCCATCGCAGTGGCA ATCGGAGCCCGTAAATAGCG
Downstream 100 bases:
>100_bases TGGCTGTAGGTGGAATCCCGGTCGTCATTGTTCCAAACGGCTCTCCAGTCTCTCCCGGCGCTCTTGGTATTCCCGTCACC ATTGTTGGCGGTAACGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 794; Mature: 793
Protein sequence:
>794_residues MADALETEYADTLEVENDPKSSARVLAAIKKAERALNDWQALCDRIDDIYSRRELYSEDWIDPDYDLFWASMEIMKPAVY ARPPVPVVSPQFKDRRKLQNVTAELLERSVISGFDRTCIDEAMCCTRDDLIFYNRGQLWLTYETDEKGGGQRVVVDHVDR KDFLHPPARKWSEVPWVAKRAWMTKSEMRKRFRKTSGDAYMDAKLATPSPQQRDDDGGADHSKKAGVWEVWHKRDNRVYW VAEGVSVMLDEGEPHLKLRGFFPCPRPAYGTLRPRTLVPVPDYLRYAGHFKKIDSLTRRIYALLDMVRMKGLIPAGGDVG DTVEELLRNDSDTAMLVPVPQAALTSGTGDFVQWMPLAELAQAIQGLIEARRELFSDYDRLSGISDIMRGETEADETLGA QQLKSQYGSVRVREKIDELQRIARDVTQIAAEIMADNFSRDTLLEMSQMEIPTKDDIEKRVQEIENAAEEEMNKLGEQAR QAMQQAQQSGQQPDPNQTKQQLQQAQQQIVGKYGPMLKEASEQVPIEDVMDLLRNDKARGFAFEVATDSTILTDELQEKQ QRNEFLTVFTGASRGLIALAGMGEPAAKLAGEVLKFVLQPYRVGRELNSVIDEFIDSAPQMAQAVQGGEGGEAEKAIAEA NAKIAEAELGKAQAAIKKVDADTQLKTFELQQKQQAAAVEAQQDRERFQLEIADTQGKLKETAARIDKIMAEIRKMGVDA QNQTRKEDREDFKATTEVQMRATDQAMQAENAEREAAFRAQDGQRADRQQDFTERSSDRQMSLAERQAEREGAE
Sequences:
>Translated_794_residues MADALETEYADTLEVENDPKSSARVLAAIKKAERALNDWQALCDRIDDIYSRRELYSEDWIDPDYDLFWASMEIMKPAVY ARPPVPVVSPQFKDRRKLQNVTAELLERSVISGFDRTCIDEAMCCTRDDLIFYNRGQLWLTYETDEKGGGQRVVVDHVDR KDFLHPPARKWSEVPWVAKRAWMTKSEMRKRFRKTSGDAYMDAKLATPSPQQRDDDGGADHSKKAGVWEVWHKRDNRVYW VAEGVSVMLDEGEPHLKLRGFFPCPRPAYGTLRPRTLVPVPDYLRYAGHFKKIDSLTRRIYALLDMVRMKGLIPAGGDVG DTVEELLRNDSDTAMLVPVPQAALTSGTGDFVQWMPLAELAQAIQGLIEARRELFSDYDRLSGISDIMRGETEADETLGA QQLKSQYGSVRVREKIDELQRIARDVTQIAAEIMADNFSRDTLLEMSQMEIPTKDDIEKRVQEIENAAEEEMNKLGEQAR QAMQQAQQSGQQPDPNQTKQQLQQAQQQIVGKYGPMLKEASEQVPIEDVMDLLRNDKARGFAFEVATDSTILTDELQEKQ QRNEFLTVFTGASRGLIALAGMGEPAAKLAGEVLKFVLQPYRVGRELNSVIDEFIDSAPQMAQAVQGGEGGEAEKAIAEA NAKIAEAELGKAQAAIKKVDADTQLKTFELQQKQQAAAVEAQQDRERFQLEIADTQGKLKETAARIDKIMAEIRKMGVDA QNQTRKEDREDFKATTEVQMRATDQAMQAENAEREAAFRAQDGQRADRQQDFTERSSDRQMSLAERQAEREGAE >Mature_793_residues ADALETEYADTLEVENDPKSSARVLAAIKKAERALNDWQALCDRIDDIYSRRELYSEDWIDPDYDLFWASMEIMKPAVYA RPPVPVVSPQFKDRRKLQNVTAELLERSVISGFDRTCIDEAMCCTRDDLIFYNRGQLWLTYETDEKGGGQRVVVDHVDRK DFLHPPARKWSEVPWVAKRAWMTKSEMRKRFRKTSGDAYMDAKLATPSPQQRDDDGGADHSKKAGVWEVWHKRDNRVYWV AEGVSVMLDEGEPHLKLRGFFPCPRPAYGTLRPRTLVPVPDYLRYAGHFKKIDSLTRRIYALLDMVRMKGLIPAGGDVGD TVEELLRNDSDTAMLVPVPQAALTSGTGDFVQWMPLAELAQAIQGLIEARRELFSDYDRLSGISDIMRGETEADETLGAQ QLKSQYGSVRVREKIDELQRIARDVTQIAAEIMADNFSRDTLLEMSQMEIPTKDDIEKRVQEIENAAEEEMNKLGEQARQ AMQQAQQSGQQPDPNQTKQQLQQAQQQIVGKYGPMLKEASEQVPIEDVMDLLRNDKARGFAFEVATDSTILTDELQEKQQ RNEFLTVFTGASRGLIALAGMGEPAAKLAGEVLKFVLQPYRVGRELNSVIDEFIDSAPQMAQAVQGGEGGEAEKAIAEAN AKIAEAELGKAQAAIKKVDADTQLKTFELQQKQQAAAVEAQQDRERFQLEIADTQGKLKETAARIDKIMAEIRKMGVDAQ NQTRKEDREDFKATTEVQMRATDQAMQAENAEREAAFRAQDGQRADRQQDFTERSSDRQMSLAERQAEREGAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89735; Mature: 89604
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADALETEYADTLEVENDPKSSARVLAAIKKAERALNDWQALCDRIDDIYSRRELYSEDW CCCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IDPDYDLFWASMEIMKPAVYARPPVPVVSPQFKDRRKLQNVTAELLERSVISGFDRTCID CCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EAMCCTRDDLIFYNRGQLWLTYETDEKGGGQRVVVDHVDRKDFLHPPARKWSEVPWVAKR HHHHCCCCCEEEEECCEEEEEEECCCCCCCCEEEEECCCCHHCCCCCHHHHCCCCHHHHH AWMTKSEMRKRFRKTSGDAYMDAKLATPSPQQRDDDGGADHSKKAGVWEVWHKRDNRVYW HHCCHHHHHHHHHHCCCCCEEECEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE VAEGVSVMLDEGEPHLKLRGFFPCPRPAYGTLRPRTLVPVPDYLRYAGHFKKIDSLTRRI EECCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH YALLDMVRMKGLIPAGGDVGDTVEELLRNDSDTAMLVPVPQAALTSGTGDFVQWMPLAEL HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHCCCCCHHHHHCCHHHH AQAIQGLIEARRELFSDYDRLSGISDIMRGETEADETLGAQQLKSQYGSVRVREKIDELQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH RIARDVTQIAAEIMADNFSRDTLLEMSQMEIPTKDDIEKRVQEIENAAEEEMNKLGEQAR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAMQQAQQSGQQPDPNQTKQQLQQAQQQIVGKYGPMLKEASEQVPIEDVMDLLRNDKARG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCCCC FAFEVATDSTILTDELQEKQQRNEFLTVFTGASRGLIALAGMGEPAAKLAGEVLKFVLQP EEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHH YRVGRELNSVIDEFIDSAPQMAQAVQGGEGGEAEKAIAEANAKIAEAELGKAQAAIKKVD HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHC ADTQLKTFELQQKQQAAAVEAQQDRERFQLEIADTQGKLKETAARIDKIMAEIRKMGVDA CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC QNQTRKEDREDFKATTEVQMRATDQAMQAENAEREAAFRAQDGQRADRQQDFTERSSDRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCCHH MSLAERQAEREGAE HHHHHHHHHHCCCC >Mature Secondary Structure ADALETEYADTLEVENDPKSSARVLAAIKKAERALNDWQALCDRIDDIYSRRELYSEDW CCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IDPDYDLFWASMEIMKPAVYARPPVPVVSPQFKDRRKLQNVTAELLERSVISGFDRTCID CCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EAMCCTRDDLIFYNRGQLWLTYETDEKGGGQRVVVDHVDRKDFLHPPARKWSEVPWVAKR HHHHCCCCCEEEEECCEEEEEEECCCCCCCCEEEEECCCCHHCCCCCHHHHCCCCHHHHH AWMTKSEMRKRFRKTSGDAYMDAKLATPSPQQRDDDGGADHSKKAGVWEVWHKRDNRVYW HHCCHHHHHHHHHHCCCCCEEECEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE VAEGVSVMLDEGEPHLKLRGFFPCPRPAYGTLRPRTLVPVPDYLRYAGHFKKIDSLTRRI EECCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH YALLDMVRMKGLIPAGGDVGDTVEELLRNDSDTAMLVPVPQAALTSGTGDFVQWMPLAEL HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHCCCCCHHHHHCCHHHH AQAIQGLIEARRELFSDYDRLSGISDIMRGETEADETLGAQQLKSQYGSVRVREKIDELQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH RIARDVTQIAAEIMADNFSRDTLLEMSQMEIPTKDDIEKRVQEIENAAEEEMNKLGEQAR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAMQQAQQSGQQPDPNQTKQQLQQAQQQIVGKYGPMLKEASEQVPIEDVMDLLRNDKARG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCCCC FAFEVATDSTILTDELQEKQQRNEFLTVFTGASRGLIALAGMGEPAAKLAGEVLKFVLQP EEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHH YRVGRELNSVIDEFIDSAPQMAQAVQGGEGGEAEKAIAEANAKIAEAELGKAQAAIKKVD HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHC ADTQLKTFELQQKQQAAAVEAQQDRERFQLEIADTQGKLKETAARIDKIMAEIRKMGVDA CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC QNQTRKEDREDFKATTEVQMRATDQAMQAENAEREAAFRAQDGQRADRQQDFTERSSDRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCCHH MSLAERQAEREGAE HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA