Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632534
Identifier: 110632534
GI number: 110632534
Start: 214571
End: 215014
Strand: Direct
Name: 110632534
Synonym: Meso_0172
Alternate gene names: NA
Gene position: 214571-215014 (Clockwise)
Preceding gene: 110632530
Following gene: 110632535
Centisome position: 4.86
GC content: 56.31
Gene sequence:
>444_bases ATGAGCAAGACCACCAGCAATAAAGGGCCGGAATTCTCCGCATTCGACCCCTCGACGGCCACGGAACAGCTTCGCAGTTT CACCGAAAAGACGGCGGATCAGGCGAAGGAAACATACGAGCGAATGAAAATGAGCGCTGAAGATGCACGCAAGGCCTTCG AGGCCTCTTTTGATACCGTGAAAAACGTGAGCGACGAGATATTGCTCAAATCCGTCGCTGCTGTACGCGCGGGGACGGAG GCTAATCTTGCCCAGGTCGAGGCTCTGGTGGCTGCCAAGAGCTTCTCCGATATGATGGAGCTGCAGAGTTCGTTTCTGCG CAAGCAGATGGAACTCGCGCTGGACCAGACACGCGAGTTCCAGACCCTTACACAGAAGGCCGCCGTCGAATTGACGAAGC CGGTGAAGGACGCTTTCGAGAAGGCGATCAAGCAGGCAGCGTGA
Upstream 100 bases:
>100_bases CTGCAACAAAAATATTGCAACGCACAAGTTTTGCGCTATATTGAGCTTAGATTTGAAGGATGCCGGCGGGCAGGCTGGCG AACCCGAAGGGATGATCAGC
Downstream 100 bases:
>100_bases GGCGAAGCGTCGCGCTGTAATTTCGAATAGCGGATTCTATATGTGTTCCGTTCGTTAGAACATGGGGTCGGTACTCCCTC CTCCCTCCGATCCCTTAGAA
Product: phasin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSKTTSNKGPEFSAFDPSTATEQLRSFTEKTADQAKETYERMKMSAEDARKAFEASFDTVKNVSDEILLKSVAAVRAGTE ANLAQVEALVAAKSFSDMMELQSSFLRKQMELALDQTREFQTLTQKAAVELTKPVKDAFEKAIKQAA
Sequences:
>Translated_147_residues MSKTTSNKGPEFSAFDPSTATEQLRSFTEKTADQAKETYERMKMSAEDARKAFEASFDTVKNVSDEILLKSVAAVRAGTE ANLAQVEALVAAKSFSDMMELQSSFLRKQMELALDQTREFQTLTQKAAVELTKPVKDAFEKAIKQAA >Mature_146_residues SKTTSNKGPEFSAFDPSTATEQLRSFTEKTADQAKETYERMKMSAEDARKAFEASFDTVKNVSDEILLKSVAAVRAGTEA NLAQVEALVAAKSFSDMMELQSSFLRKQMELALDQTREFQTLTQKAAVELTKPVKDAFEKAIKQAA
Specific function: Unknown
COG id: COG5490
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018968 [H]
Pfam domain/function: PF09361 Phasin_2 [H]
EC number: NA
Molecular weight: Translated: 16256; Mature: 16125
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTTSNKGPEFSAFDPSTATEQLRSFTEKTADQAKETYERMKMSAEDARKAFEASFDTV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KNVSDEILLKSVAAVRAGTEANLAQVEALVAAKSFSDMMELQSSFLRKQMELALDQTREF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTLTQKAAVELTKPVKDAFEKAIKQAA HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKTTSNKGPEFSAFDPSTATEQLRSFTEKTADQAKETYERMKMSAEDARKAFEASFDTV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KNVSDEILLKSVAAVRAGTEANLAQVEALVAAKSFSDMMELQSSFLRKQMELALDQTREF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTLTQKAAVELTKPVKDAFEKAIKQAA HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]