| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is asmA [C]
Identifier: 110632529
GI number: 110632529
Start: 203559
End: 205370
Strand: Reverse
Name: asmA [C]
Synonym: Meso_0167
Alternate gene names: 110632529
Gene position: 205370-203559 (Counterclockwise)
Preceding gene: 110632531
Following gene: 110632524
Centisome position: 4.65
GC content: 59.44
Gene sequence:
>1812_bases ATGCCGATATCGCTGGCGAAGAAAGGTAGCTGGGCTGTCGGCACGGTAGTGCTCCTCATCGTATTGGTTGTGGCAGTGCT TCCTTTAATCGCCTCAACCCGGATCGTGCGGAACAGCATCGCCTACCAGATGAGCGCGTGGAGCGGCTATCACGTAAGGC TGGACGAGACACCGGAAATCAATGTCTGGCCGCTTCAGGCCGTGCTCCACGACGTCACCTTGCTGGATTCAGAGGGAAGC AACGGCCAGACCGTGCTCGATGCCGAGCGGATCGACATAGATCTTTCGGCCCTCGCCGCGCTGCGCGGCGATATCGTGTT CACCCGCATGCGGCTGATCCGCCCGGTGCTACGTGTCAGGCAGCGGGGGGACGAGCTACAGCCCATTTCCCCGCAGGGAT GGGGCAAGGTCCCCCAATCCGTAGAAGCCGCCAAGCAGGCAGTTTCCGCCGCCCCACGCAATCCCGACACCGCCTTCCTC CCAAATGACTCCTTCGGCAAGATCGAGTTCGAGGAGGGCCGCATTGTCGCGGAAGACGGACAGAACCAGAGCGATATAGT CACCAGCTTTTCGGGCACGCTCGACTGGCCTGCGCTCAATCGCCAGGCGTCGCTTTCCGCCACAGGTATCTGGCACGGAG AAAGCATTTCGCTCACCGCCTCCATTGCCGAGCCGTTAATCCTTTTCGGCGGCGGCAATACAGCCGTCAGTCTTTCGCTT AAAGCGCCGCCAGCCAATCTCTCTTTCGAGGGGATGGCGAGCCGTTCGGAAAACGGTTTTGTAGACGGGGATTTTACACT ATCGGCGCCCTCCCTCAGCCGGCTCGTCGAGTGGACCCACTCGCGCATGCCGCTGGCCAGCAGGATCGGACCGTTTTCCA TCTCTGCGAGAATGCTCGGCAATCCAAAACGCCTGAAATTCGAACAAGCCGCGCTCACACTCGATAAGAGCGCCGCGGAA GGTCTTCTCGACGTAACCTTCGATTCAAGCCGCCCTACCGTTGCGGGCACCCTTGCATTCGATACCCTTAATCTGCGTGC CTTGCTGGATGCTTTCAATCCGCTTTCTACCGGCAATGAGGAACAGAAAGAACCCGGAGCGCAGACCGAGCTTGATTTTG ACCTTCGTGTTTCAGCGGCTTCCGCCACATATGACAATGCGGTCCTGACTGATGTCGCGGCAGCGGCGATGGTGCGCGAG GACCTTGCGGCATTCGATATTTCCGATGCCAGCGCCTTTGGCGGCACATTGCAGTTTGGCCTGCGCCGAAGCAACGGAGA TAACGTCGACATCAGCATGACAGGCGAGGAGATCAATATCGGCGAAATGGCCGCTGCATTCGGCTATCAAAGGCTCATGC CCCAGGCCACCGGCGATTTCTCCCTGATACTGAAAGGCACCGGGCAGCGCATCGAAACGGTGCTGCAATCGGCGGACGGG AGTGTTTCGGCAAATCTCGGCGCCGGCAGCGTACCGGGGCTCAGTATCGATGCTTTCCTGACCCGCAGCGAAGCAGGCAA CTTCTTTCCAATGGCAGCGCTGGAAGAAGGGATGCTGCGAACGGAGAGCATCAAGATGAAGGCGACGGTCAGCAAAGGCG TGATGCAGATCAATGACGCCGAGGCGAAGTCGGGCCCTTACACCATCGGGATAAATGGTTTCGTTCCGCTTGCCGGCCGC GGGCTTGCGCTTTATGGCACGCTTGCTGCGCCGGAAAACACGGATGAACGGCTTAAATCGCCCCTCTCCTTCTTTGTAGG AGGCAACTGGGCGGCCCCATTCATCGCCTCCTTCCTCCCGGCGGAAGACTGA
Upstream 100 bases:
>100_bases AGCCTCTAACAAACTGTGTTAGAAGGGTTTGAATTGGGAACCCCATCGTTTAAACCGCGAGGAACGGTTCGGTCAAAGTT GGGAATTACGGCGAGGATGT
Downstream 100 bases:
>100_bases GAAGCCAATCTACTCCCTGAAGGCCTTAAGAGCCGAACGCTAGCAGTTCCTCTCGCCGGCGCCGCAACTCACGCCGCTTG TTTGTAATCGAGGCCGCGAT
Product: AsmA
Products: NA
Alternate protein names: AsmA Protein Assembly Of Outer Membrane Proteins; AsmA Protein Family; AsmA Protein Assembly Of Outermembrane Proteins; Assembly Of Outer Membrane Protein
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MPISLAKKGSWAVGTVVLLIVLVVAVLPLIASTRIVRNSIAYQMSAWSGYHVRLDETPEINVWPLQAVLHDVTLLDSEGS NGQTVLDAERIDIDLSALAALRGDIVFTRMRLIRPVLRVRQRGDELQPISPQGWGKVPQSVEAAKQAVSAAPRNPDTAFL PNDSFGKIEFEEGRIVAEDGQNQSDIVTSFSGTLDWPALNRQASLSATGIWHGESISLTASIAEPLILFGGGNTAVSLSL KAPPANLSFEGMASRSENGFVDGDFTLSAPSLSRLVEWTHSRMPLASRIGPFSISARMLGNPKRLKFEQAALTLDKSAAE GLLDVTFDSSRPTVAGTLAFDTLNLRALLDAFNPLSTGNEEQKEPGAQTELDFDLRVSAASATYDNAVLTDVAAAAMVRE DLAAFDISDASAFGGTLQFGLRRSNGDNVDISMTGEEINIGEMAAAFGYQRLMPQATGDFSLILKGTGQRIETVLQSADG SVSANLGAGSVPGLSIDAFLTRSEAGNFFPMAALEEGMLRTESIKMKATVSKGVMQINDAEAKSGPYTIGINGFVPLAGR GLALYGTLAAPENTDERLKSPLSFFVGGNWAAPFIASFLPAED
Sequences:
>Translated_603_residues MPISLAKKGSWAVGTVVLLIVLVVAVLPLIASTRIVRNSIAYQMSAWSGYHVRLDETPEINVWPLQAVLHDVTLLDSEGS NGQTVLDAERIDIDLSALAALRGDIVFTRMRLIRPVLRVRQRGDELQPISPQGWGKVPQSVEAAKQAVSAAPRNPDTAFL PNDSFGKIEFEEGRIVAEDGQNQSDIVTSFSGTLDWPALNRQASLSATGIWHGESISLTASIAEPLILFGGGNTAVSLSL KAPPANLSFEGMASRSENGFVDGDFTLSAPSLSRLVEWTHSRMPLASRIGPFSISARMLGNPKRLKFEQAALTLDKSAAE GLLDVTFDSSRPTVAGTLAFDTLNLRALLDAFNPLSTGNEEQKEPGAQTELDFDLRVSAASATYDNAVLTDVAAAAMVRE DLAAFDISDASAFGGTLQFGLRRSNGDNVDISMTGEEINIGEMAAAFGYQRLMPQATGDFSLILKGTGQRIETVLQSADG SVSANLGAGSVPGLSIDAFLTRSEAGNFFPMAALEEGMLRTESIKMKATVSKGVMQINDAEAKSGPYTIGINGFVPLAGR GLALYGTLAAPENTDERLKSPLSFFVGGNWAAPFIASFLPAED >Mature_602_residues PISLAKKGSWAVGTVVLLIVLVVAVLPLIASTRIVRNSIAYQMSAWSGYHVRLDETPEINVWPLQAVLHDVTLLDSEGSN GQTVLDAERIDIDLSALAALRGDIVFTRMRLIRPVLRVRQRGDELQPISPQGWGKVPQSVEAAKQAVSAAPRNPDTAFLP NDSFGKIEFEEGRIVAEDGQNQSDIVTSFSGTLDWPALNRQASLSATGIWHGESISLTASIAEPLILFGGGNTAVSLSLK APPANLSFEGMASRSENGFVDGDFTLSAPSLSRLVEWTHSRMPLASRIGPFSISARMLGNPKRLKFEQAALTLDKSAAEG LLDVTFDSSRPTVAGTLAFDTLNLRALLDAFNPLSTGNEEQKEPGAQTELDFDLRVSAASATYDNAVLTDVAAAAMVRED LAAFDISDASAFGGTLQFGLRRSNGDNVDISMTGEEINIGEMAAAFGYQRLMPQATGDFSLILKGTGQRIETVLQSADGS VSANLGAGSVPGLSIDAFLTRSEAGNFFPMAALEEGMLRTESIKMKATVSKGVMQINDAEAKSGPYTIGINGFVPLAGRG LALYGTLAAPENTDERLKSPLSFFVGGNWAAPFIASFLPAED
Specific function: Involved In The Inhibition Of Assembly Of Mutant Ompf Proteins. In General, Could Be Involved In The Assembly Of Outer Membrane Proteins. [C]
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64098; Mature: 63967
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISLAKKGSWAVGTVVLLIVLVVAVLPLIASTRIVRNSIAYQMSAWSGYHVRLDETPEI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCC NVWPLQAVLHDVTLLDSEGSNGQTVLDAERIDIDLSALAALRGDIVFTRMRLIRPVLRVR EEEEHHHHHHHHEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRGDELQPISPQGWGKVPQSVEAAKQAVSAAPRNPDTAFLPNDSFGKIEFEEGRIVAEDG HCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCEEEECCC QNQSDIVTSFSGTLDWPALNRQASLSATGIWHGESISLTASIAEPLILFGGGNTAVSLSL CCCHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEE KAPPANLSFEGMASRSENGFVDGDFTLSAPSLSRLVEWTHSRMPLASRIGPFSISARMLG ECCCCCCCCCCCCCCCCCCEECCCEEECCHHHHHHHHHHHCCCCHHHCCCCCEEEHHHCC NPKRLKFEQAALTLDKSAAEGLLDVTFDSSRPTVAGTLAFDTLNLRALLDAFNPLSTGNE CCHHEEEHHHHHEECCHHHCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHHCCCCCCCCC EQKEPGAQTELDFDLRVSAASATYDNAVLTDVAAAAMVREDLAAFDISDASAFGGTLQFG HHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEE LRRSNGDNVDISMTGEEINIGEMAAAFGYQRLMPQATGDFSLILKGTGQRIETVLQSADG EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCC SVSANLGAGSVPGLSIDAFLTRSEAGNFFPMAALEEGMLRTESIKMKATVSKGVMQINDA CEEECCCCCCCCCCEEEHEEECCCCCCEEEHHHHHHCCEEHHCEEEEEEHHCCCEEECCC EAKSGPYTIGINGFVPLAGRGLALYGTLAAPENTDERLKSPLSFFVGGNWAAPFIASFLP CCCCCCEEEEECCCEECCCCCEEEEEEECCCCCCHHHHHCCCEEEECCCCHHHHHHHHCC AED CCC >Mature Secondary Structure PISLAKKGSWAVGTVVLLIVLVVAVLPLIASTRIVRNSIAYQMSAWSGYHVRLDETPEI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCC NVWPLQAVLHDVTLLDSEGSNGQTVLDAERIDIDLSALAALRGDIVFTRMRLIRPVLRVR EEEEHHHHHHHHEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRGDELQPISPQGWGKVPQSVEAAKQAVSAAPRNPDTAFLPNDSFGKIEFEEGRIVAEDG HCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCEEEECCC QNQSDIVTSFSGTLDWPALNRQASLSATGIWHGESISLTASIAEPLILFGGGNTAVSLSL CCCHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEE KAPPANLSFEGMASRSENGFVDGDFTLSAPSLSRLVEWTHSRMPLASRIGPFSISARMLG ECCCCCCCCCCCCCCCCCCEECCCEEECCHHHHHHHHHHHCCCCHHHCCCCCEEEHHHCC NPKRLKFEQAALTLDKSAAEGLLDVTFDSSRPTVAGTLAFDTLNLRALLDAFNPLSTGNE CCHHEEEHHHHHEECCHHHCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHHCCCCCCCCC EQKEPGAQTELDFDLRVSAASATYDNAVLTDVAAAAMVREDLAAFDISDASAFGGTLQFG HHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEE LRRSNGDNVDISMTGEEINIGEMAAAFGYQRLMPQATGDFSLILKGTGQRIETVLQSADG EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCC SVSANLGAGSVPGLSIDAFLTRSEAGNFFPMAALEEGMLRTESIKMKATVSKGVMQINDA CEEECCCCCCCCCCEEEHEEECCCCCCEEEHHHHHHCCEEHHCEEEEEEHHCCCEEECCC EAKSGPYTIGINGFVPLAGRGLALYGTLAAPENTDERLKSPLSFFVGGNWAAPFIASFLP CCCCCCEEEEECCCEECCCCCEEEEEEECCCCCCHHHHHCCCEEEECCCCHHHHHHHHCC AED CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA