| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110632524
Identifier: 110632524
GI number: 110632524
Start: 198642
End: 199073
Strand: Reverse
Name: 110632524
Synonym: Meso_0162
Alternate gene names: NA
Gene position: 199073-198642 (Counterclockwise)
Preceding gene: 110632529
Following gene: 110632523
Centisome position: 4.51
GC content: 59.26
Gene sequence:
>432_bases ATGGGACGATACGGCCTTGGGGGTTCAGGCCGCCGTGAAACTCATTCCATCACGGCTAGGGGTGATTGCCGCATCCTTGT TGTTGCGGCCTCACCCATCAATCGCATCGTCATTTCCCGCATGATCGAGCGCATTTATCTGAAGACGGCTGCGGTCAGCC CCGAAGCCGCGCTCGAGGCGGTGGCCACTAACCGCCCGGCATTGCTTATCATCGATGAAGGATCATACGGCGATTTGGAT GCATTGTTGCAGGCGGTGGCCGATCTAAGACAGTCTTCGGCAACCGGTTTCCCTCGAATCGTGCTGATCGTCGAGCCGTC CCGGCTCGGTAATCCCGGCTACGATGGGATAGCGGATGCGGTTATCGCAAAGCCGATAATGCCGGAGACATTGCAGCCGG TCGTTGAGCGCCTGACGCGGGACCCCGCTTAG
Upstream 100 bases:
>100_bases TATGCGGGTTGACATAGGCCCTCCAATAACGAGTATGCCGCGGCTCACCGCAACCATGCATTGAACCGGCGGTTCAGCGA AAATCAGGATGAGGACAAGC
Downstream 100 bases:
>100_bases CCACGCATCCAAAAAAGGACGGCGCAGGCCTGAAAGGGCCGTGCTCAATCTTGGTAACCCTTTCTTTCTAGGTTGTGCCA GGGCTATAGTGATCAGAGCA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGRYGLGGSGRRETHSITARGDCRILVVAASPINRIVISRMIERIYLKTAAVSPEAALEAVATNRPALLIIDEGSYGDLD ALLQAVADLRQSSATGFPRIVLIVEPSRLGNPGYDGIADAVIAKPIMPETLQPVVERLTRDPA
Sequences:
>Translated_143_residues MGRYGLGGSGRRETHSITARGDCRILVVAASPINRIVISRMIERIYLKTAAVSPEAALEAVATNRPALLIIDEGSYGDLD ALLQAVADLRQSSATGFPRIVLIVEPSRLGNPGYDGIADAVIAKPIMPETLQPVVERLTRDPA >Mature_142_residues GRYGLGGSGRRETHSITARGDCRILVVAASPINRIVISRMIERIYLKTAAVSPEAALEAVATNRPALLIIDEGSYGDLDA LLQAVADLRQSSATGFPRIVLIVEPSRLGNPGYDGIADAVIAKPIMPETLQPVVERLTRDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15261; Mature: 15130
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYGLGGSGRRETHSITARGDCRILVVAASPINRIVISRMIERIYLKTAAVSPEAALEA CCCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VATNRPALLIIDEGSYGDLDALLQAVADLRQSSATGFPRIVLIVEPSRLGNPGYDGIADA HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCCCCHHHHH VIAKPIMPETLQPVVERLTRDPA HHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure GRYGLGGSGRRETHSITARGDCRILVVAASPINRIVISRMIERIYLKTAAVSPEAALEA CCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VATNRPALLIIDEGSYGDLDALLQAVADLRQSSATGFPRIVLIVEPSRLGNPGYDGIADA HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCCCCHHHHH VIAKPIMPETLQPVVERLTRDPA HHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA