| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is pgl [H]
Identifier: 110632520
GI number: 110632520
Start: 193331
End: 194059
Strand: Reverse
Name: pgl [H]
Synonym: Meso_0158
Alternate gene names: 110632520
Gene position: 194059-193331 (Counterclockwise)
Preceding gene: 110632521
Following gene: 110632519
Centisome position: 4.4
GC content: 64.06
Gene sequence:
>729_bases ATGGCCAAGGCAGTCTGGCATGAATTCGCCGCGAGCGAGGCTCTCGCGGAAGCCCTCGCCGAAGCGGTGGCGCAGCACCT TGCGGCGGCTCTGGAAAAGCGCGGCATGGCGAGCATCGCCGTTTCCGGCGGCAGCACTCCAGCTCCATTCTTCCGCGCTC TGTCGCGAAAGAAGATCGATTGGGCCCGCATTATCGTCACGCTTGTAGACGAGCGCTTCGTTCCTCCCTCTTCCGAGCGG TCGAATGCTGCTCTGGCTTCGCGTTATTTGCTGCAGAACGATGCGGCGCGAGCGAGCTTCGTACCGCTTTACCAGCCGGT CGAAACGGTCGAGGAGGCTGCCGAGAAGGCAGACGAGGAAATCGGCAGGCTCCCGCTGCCTCTCGATGTCGTCGTGCTCG GCATGGGGCTCGACGGGCACACGGCATCTTTCTTTCCGGATGCGGAAGATATCGCGCTCAAGCTGCAGGTGGAAAATCGC CGCGTGCTGCCCATTCACGCAAGGAGCGCCGGAGAACCGCGCCTGACGCTATCCATGCCCCTTCTTTGCCAGGCACGGCT CATGGTGCTCCATATCGAAGGGCAGGAGAAGCGCCGGCTGCTCGAAGCCGCACTTGCCGAAGAGACCGGTGCGAAGCTGC CCGTGCGGATCGCCGTGGAACAAGCCGCGGCCCCAGTCGCTATCTATTGGGCACCGGGAGCGGCAAGCGCCTCGGGCAAG CGCCCCTGA
Upstream 100 bases:
>100_bases GTAGCCAGTCGGTGCAGCCCTATACCGCAGGCACTTGGGGCCCCTCAGCGTCGATCGCCCTCATCGAACGTGACGGTCGC ACCTGGCATGAGAGCTTCTG
Downstream 100 bases:
>100_bases CATCTTGAATATTATCGAGACCGAAGCCACTCGGACTCGACCATGACAGGATATGAAGCCATGACCGCAAGGCGAGAAAT CGAAGCCGTCACAGCCCGCA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAKAVWHEFAASEALAEALAEAVAQHLAAALEKRGMASIAVSGGSTPAPFFRALSRKKIDWARIIVTLVDERFVPPSSER SNAALASRYLLQNDAARASFVPLYQPVETVEEAAEKADEEIGRLPLPLDVVVLGMGLDGHTASFFPDAEDIALKLQVENR RVLPIHARSAGEPRLTLSMPLLCQARLMVLHIEGQEKRRLLEAALAEETGAKLPVRIAVEQAAAPVAIYWAPGAASASGK RP
Sequences:
>Translated_242_residues MAKAVWHEFAASEALAEALAEAVAQHLAAALEKRGMASIAVSGGSTPAPFFRALSRKKIDWARIIVTLVDERFVPPSSER SNAALASRYLLQNDAARASFVPLYQPVETVEEAAEKADEEIGRLPLPLDVVVLGMGLDGHTASFFPDAEDIALKLQVENR RVLPIHARSAGEPRLTLSMPLLCQARLMVLHIEGQEKRRLLEAALAEETGAKLPVRIAVEQAAAPVAIYWAPGAASASGK RP >Mature_241_residues AKAVWHEFAASEALAEALAEAVAQHLAAALEKRGMASIAVSGGSTPAPFFRALSRKKIDWARIIVTLVDERFVPPSSERS NAALASRYLLQNDAARASFVPLYQPVETVEEAAEKADEEIGRLPLPLDVVVLGMGLDGHTASFFPDAEDIALKLQVENRR VLPIHARSAGEPRLTLSMPLLCQARLMVLHIEGQEKRRLLEAALAEETGAKLPVRIAVEQAAAPVAIYWAPGAASASGKR P
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=205, Percent_Identity=32.6829268292683, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI6912586, Length=219, Percent_Identity=31.9634703196347, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI115533060, Length=192, Percent_Identity=31.7708333333333, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533058, Length=192, Percent_Identity=31.7708333333333, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321957, Length=204, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324362, Length=210, Percent_Identity=30.952380952381, Blast_Score=72, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6319918, Length=213, Percent_Identity=30.9859154929577, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321687, Length=237, Percent_Identity=23.2067510548523, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641119, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26012; Mature: 25881
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAVWHEFAASEALAEALAEAVAQHLAAALEKRGMASIAVSGGSTPAPFFRALSRKKID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCH WARIIVTLVDERFVPPSSERSNAALASRYLLQNDAARASFVPLYQPVETVEEAAEKADEE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH IGRLPLPLDVVVLGMGLDGHTASFFPDAEDIALKLQVENRRVLPIHARSAGEPRLTLSMP HCCCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEECC LLCQARLMVLHIEGQEKRRLLEAALAEETGAKLPVRIAVEQAAAPVAIYWAPGAASASGK HHHCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCC RP CC >Mature Secondary Structure AKAVWHEFAASEALAEALAEAVAQHLAAALEKRGMASIAVSGGSTPAPFFRALSRKKID CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCH WARIIVTLVDERFVPPSSERSNAALASRYLLQNDAARASFVPLYQPVETVEEAAEKADEE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH IGRLPLPLDVVVLGMGLDGHTASFFPDAEDIALKLQVENRRVLPIHARSAGEPRLTLSMP HCCCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEECC LLCQARLMVLHIEGQEKRRLLEAALAEETGAKLPVRIAVEQAAAPVAIYWAPGAASASGK HHHCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCC RP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]