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The map label for this gene is 109947741

Identifier: 109947741

GI number: 109947741

Start: 1051035

End: 1051952

Strand: Reverse

Name: 109947741

Synonym: Hac_1216

Alternate gene names: NA

Gene position: 1051952-1051035 (Counterclockwise)

Preceding gene: 109947742

Following gene: 109947729

Centisome position: 67.7

GC content: 36.17

Gene sequence:

>918_bases
ATGAAGCCACGAGACATTGAAATCATTCAAAGCGTTTTAGAGATTACAGGGCCTATTAGCCCTACTGAAGTTTATAATAA
AGCCAAAGAGCTTTTTGAAAAAGGCGAGATTACAAACATGTTTGATTATGGGGGCAACACTCCACACCAGAGCGTTAGCG
CCTATATTTATACAGCCTTAAAAGAGGGCGAAGAGGTGCCTTTTTTTAAAGTGCAAGAAAAACCAAACATTTTAATCGCT
TTAAAAAGCAAAGAGTTGGATTTAAATGCTGAAAAATCAAGCGTCCCAATCGCGCATGAAAGGGATTTGCACCCTTTTTT
AACCTTTATGGCTTTTCATAATGAAAATTTGAAATGCTACACGAAAACCATCTTCCATGAAGAAAGTTCAAAATCGCAAA
AAGGCATGGACAGATGGCTTTATCCGGACATGGTGGGGGTTAGGTTTTTGCACGCAGAGCTGTCCAATGAAAATTTAATC
GCTTTTTCTAAGAAGTTTGATACCTTGCCCATTAAATTGGTGAGCTTTGAATTAAAAAAAGAAATCAGCGTAACTAATTG
TAGGGAGTATTACTTTCAAGCGATTTCTAATAGCTCTTGGGCTAATGAGGGGTATTTAGTGGGTTGTAATATTGATACAC
AAAACACTATTCTGATGAATTTATTGAAGCGTTTGCATGCGAGTTTTGGGATTGGCGTGATTGATTTAAGGACGGATGAA
TATAAAAGCATCATTTTATTAAACGCTAAATATAAAGAAAAAATTGACTATACCATGGCTCAAGAGCTTAGCGAAAAAAA
TAAAAAATTCCGTGATTTTTTAAAGAGCGTTGTGGATTATGACCCAAATTTCCCAAGCCGCTATAAGGACGAGTTTGATG
AGATCAAAAAGAAAGATGAGTTATACCCCAATTCATAA

Upstream 100 bases:

>100_bases
TATGCAAACCGGATCATTGAATTAGTCCCAAGCCCTAAAGGCGCTCAAATCATTGATTTTAAAGGCAACTATGAAGAATA
TTTAGCGAGCAAGAAATAAA

Downstream 100 bases:

>100_bases
CTTTCTTTTTAAAAAAATGAATTATAAAAAATGCTAAAAAGCATTTTTACAACAAATAGCCAAGAGCTTGATGATAATCA
AGCGATAGTCTCTTAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Excinuclease ATPase Subunit

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKPRDIEIIQSVLEITGPISPTEVYNKAKELFEKGEITNMFDYGGNTPHQSVSAYIYTALKEGEEVPFFKVQEKPNILIA
LKSKELDLNAEKSSVPIAHERDLHPFLTFMAFHNENLKCYTKTIFHEESSKSQKGMDRWLYPDMVGVRFLHAELSNENLI
AFSKKFDTLPIKLVSFELKKEISVTNCREYYFQAISNSSWANEGYLVGCNIDTQNTILMNLLKRLHASFGIGVIDLRTDE
YKSIILLNAKYKEKIDYTMAQELSEKNKKFRDFLKSVVDYDPNFPSRYKDEFDEIKKKDELYPNS

Sequences:

>Translated_305_residues
MKPRDIEIIQSVLEITGPISPTEVYNKAKELFEKGEITNMFDYGGNTPHQSVSAYIYTALKEGEEVPFFKVQEKPNILIA
LKSKELDLNAEKSSVPIAHERDLHPFLTFMAFHNENLKCYTKTIFHEESSKSQKGMDRWLYPDMVGVRFLHAELSNENLI
AFSKKFDTLPIKLVSFELKKEISVTNCREYYFQAISNSSWANEGYLVGCNIDTQNTILMNLLKRLHASFGIGVIDLRTDE
YKSIILLNAKYKEKIDYTMAQELSEKNKKFRDFLKSVVDYDPNFPSRYKDEFDEIKKKDELYPNS
>Mature_305_residues
MKPRDIEIIQSVLEITGPISPTEVYNKAKELFEKGEITNMFDYGGNTPHQSVSAYIYTALKEGEEVPFFKVQEKPNILIA
LKSKELDLNAEKSSVPIAHERDLHPFLTFMAFHNENLKCYTKTIFHEESSKSQKGMDRWLYPDMVGVRFLHAELSNENLI
AFSKKFDTLPIKLVSFELKKEISVTNCREYYFQAISNSSWANEGYLVGCNIDTQNTILMNLLKRLHASFGIGVIDLRTDE
YKSIILLNAKYKEKIDYTMAQELSEKNKKFRDFLKSVVDYDPNFPSRYKDEFDEIKKKDELYPNS

Specific function: Unknown

COG id: COG2958

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35411; Mature: 35411

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRDIEIIQSVLEITGPISPTEVYNKAKELFEKGEITNMFDYGGNTPHQSVSAYIYTAL
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHHHH
KEGEEVPFFKVQEKPNILIALKSKELDLNAEKSSVPIAHERDLHPFLTFMAFHNENLKCY
HCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE
TKTIFHEESSKSQKGMDRWLYPDMVGVRFLHAELSNENLIAFSKKFDTLPIKLVSFELKK
EHHHHHCCCCHHHHCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEHHHH
EISVTNCREYYFQAISNSSWANEGYLVGCNIDTQNTILMNLLKRLHASFGIGVIDLRTDE
CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCC
YKSIILLNAKYKEKIDYTMAQELSEKNKKFRDFLKSVVDYDPNFPSRYKDEFDEIKKKDE
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
LYPNS
CCCCC
>Mature Secondary Structure
MKPRDIEIIQSVLEITGPISPTEVYNKAKELFEKGEITNMFDYGGNTPHQSVSAYIYTAL
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHHHH
KEGEEVPFFKVQEKPNILIALKSKELDLNAEKSSVPIAHERDLHPFLTFMAFHNENLKCY
HCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE
TKTIFHEESSKSQKGMDRWLYPDMVGVRFLHAELSNENLIAFSKKFDTLPIKLVSFELKK
EHHHHHCCCCHHHHCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEHHHH
EISVTNCREYYFQAISNSSWANEGYLVGCNIDTQNTILMNLLKRLHASFGIGVIDLRTDE
CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCC
YKSIILLNAKYKEKIDYTMAQELSEKNKKFRDFLKSVVDYDPNFPSRYKDEFDEIKKKDE
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
LYPNS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA