| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is guaB [H]
Identifier: 109947724
GI number: 109947724
Start: 1034027
End: 1035472
Strand: Reverse
Name: guaB [H]
Synonym: Hac_1197
Alternate gene names: 109947724
Gene position: 1035472-1034027 (Counterclockwise)
Preceding gene: 109947725
Following gene: 109947723
Centisome position: 66.64
GC content: 41.7
Gene sequence:
>1446_bases ATGAGAATTTTACAAAGGGCTTTGACTTTTGAAGATGTGTTGATGGTGCCTAGAAAATCTAGCGTTTTACCTAAAGATGT GAGTTTAAAATCTCGCTTGACTAAAAACATTAGCTTGAATATCCCCTTTATTAGCGCGGCTATGGATACGGTTACGGAGC ATAAAACCGCTATTGCTATGGCGCGCCTTGGGGGTATTGGCATTGTGCATAAAAACATGGATATTGAAACGCAAGTTAAA GAAATCGCTAAGGTTAAAAAAAGTGAGAGTGGGGTGATTAATGATCCTATTTTTATCCACGCGCACAAAACTCTAGCGGA CGCTAAAGCTATAACGGATAATTACAAGATTTCAGGCGTGCCTGTGGTGGATGATAAGGGGCTGTTGATTGGGATTTTAA CCAATAGAGATGTGCGTTTTGAAACGGATTTGAGTAAAAAAGTGGGCGATGTGATGACTAAAATGCCTTTAGTTACCGCT CATGTGAGCATTAGTTTAGATGAAGCGAGCGATTTGATGCACAAGCACAAGATTGAAAAATTGCCTATTGTAGATAAAAA CAATATCTTAAAAGGCTTGATTACGATTAAGGACATCCAAAAACGCATTGAATACCCTGATGCGAATAAAGATGATTTTG GGAGACTAAGAGTAGGGGCGGCTATTGGAGTGGGGCAATTAGATAGGGCTGAAATGCTAGTTAAGGCTGGGGTTGATGCG TTGGTGTTAGATAGTGCGCATGGGCATTCGGCGAATATTTTACACACTTTAGAAGAGATTAAAAAAAGCTTGGTGGTAGA TGTCATTGTAGGGAATGTGGTAACTAAAGAGGCTACAAGCGATTTAATTAGTGTGGGAGCGGATGCTATTAAAGTGGGTA TTGGGCCAGGAAGCATTTGCACCACTAGGATTGTAGCTGGAGTGGGAATGCCCCAAGTGAGTGCGATTGATAATTGCGTA GAAGTGGCGTCTAAATTTGATATTCCCGTGATTGCAGATGGAGGGATACGTTATTCAGGAGATGTGGCTAAGGCTCTAGC TTTAGGGGCATCAAGCGTGATGATAGGTTCTTTACTCGCTGGTACAGAAGAATCTCCTGGGGATTTTATAATTTATCAAG GGAGACAATATAAAAGTTATAGGGGCATGGGCAGTATTGGGGCTATGACTAAAGGGAGCTCTGATAGGTATTTTCAAGAG GGCGTTGCGAGTGAAAAATTAGTCCCTGAAGGTATTGAGGGGCGTGTGCCTTATCGTGGTAAGGTTTCAGATATGATTTT CCAATTAGTAGGGGGCGTGCGCTCTTCTATGGGGTATCAGGGGGCGAAAAATATTTTGGAATTGTATCAAAACGCTGAAT TTGTAGAAATCACTAGCGCTGGGTTGAAAGAAAGCCATGTGCATGGCGTAGATATTACTAAAGAAGCCCCTAATTATTAT GGGTGA
Upstream 100 bases:
>100_bases GATGCAATTCATTGCTAAGGCTTTTGATGAGCAAAGCCTTTTAGATGTTTCCTACGCTTTAGAGCAGGAATTAAAATTAA AACTAGATTAAGGATAGAAA
Downstream 100 bases:
>100_bases ATTTTAAAAGAAAACAAGACAAATCATTAAAAAACTCGTTAAAAAGCTTGGTTTAATGAGTTTTTAAAACTTAATTGCTA CAATGAAGAAAATTTTCAAT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAMARLGGIGIVHKNMDIETQVK EIAKVKKSESGVINDPIFIHAHKTLADAKAITDNYKISGVPVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTA HVSISLDEASDLMHKHKIEKLPIVDKNNILKGLITIKDIQKRIEYPDANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISVGADAIKVGIGPGSICTTRIVAGVGMPQVSAIDNCV EVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLAGTEESPGDFIIYQGRQYKSYRGMGSIGAMTKGSSDRYFQE GVASEKLVPEGIEGRVPYRGKVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY G
Sequences:
>Translated_481_residues MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAMARLGGIGIVHKNMDIETQVK EIAKVKKSESGVINDPIFIHAHKTLADAKAITDNYKISGVPVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTA HVSISLDEASDLMHKHKIEKLPIVDKNNILKGLITIKDIQKRIEYPDANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISVGADAIKVGIGPGSICTTRIVAGVGMPQVSAIDNCV EVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLAGTEESPGDFIIYQGRQYKSYRGMGSIGAMTKGSSDRYFQE GVASEKLVPEGIEGRVPYRGKVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY G >Mature_481_residues MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAMARLGGIGIVHKNMDIETQVK EIAKVKKSESGVINDPIFIHAHKTLADAKAITDNYKISGVPVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTA HVSISLDEASDLMHKHKIEKLPIVDKNNILKGLITIKDIQKRIEYPDANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISVGADAIKVGIGPGSICTTRIVAGVGMPQVSAIDNCV EVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLAGTEESPGDFIIYQGRQYKSYRGMGSIGAMTKGSSDRYFQE GVASEKLVPEGIEGRVPYRGKVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY G
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=479, Percent_Identity=39.4572025052192, Blast_Score=314, Evalue=2e-85, Organism=Homo sapiens, GI34328930, Length=479, Percent_Identity=39.4572025052192, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI156616279, Length=479, Percent_Identity=39.4572025052192, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI34328928, Length=479, Percent_Identity=39.4572025052192, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI66933016, Length=479, Percent_Identity=40.5010438413361, Blast_Score=312, Evalue=6e-85, Organism=Homo sapiens, GI217035152, Length=486, Percent_Identity=39.3004115226337, Blast_Score=309, Evalue=5e-84, Organism=Homo sapiens, GI217035148, Length=479, Percent_Identity=38.8308977035491, Blast_Score=302, Evalue=5e-82, Organism=Homo sapiens, GI217035150, Length=479, Percent_Identity=36.7432150313152, Blast_Score=275, Evalue=6e-74, Organism=Homo sapiens, GI50541954, Length=258, Percent_Identity=39.1472868217054, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541952, Length=258, Percent_Identity=39.1472868217054, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541948, Length=258, Percent_Identity=39.1472868217054, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541956, Length=258, Percent_Identity=39.1472868217054, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI156104880, Length=246, Percent_Identity=38.6178861788618, Blast_Score=154, Evalue=1e-37, Organism=Escherichia coli, GI1788855, Length=483, Percent_Identity=54.8654244306418, Blast_Score=477, Evalue=1e-136, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=37.10407239819, Blast_Score=145, Evalue=5e-36, Organism=Caenorhabditis elegans, GI71994385, Length=476, Percent_Identity=36.9747899159664, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI71994389, Length=420, Percent_Identity=39.2857142857143, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI17560440, Length=254, Percent_Identity=38.1889763779528, Blast_Score=170, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322012, Length=481, Percent_Identity=40.7484407484407, Blast_Score=336, Evalue=6e-93, Organism=Saccharomyces cerevisiae, GI6323464, Length=481, Percent_Identity=41.7879417879418, Blast_Score=330, Evalue=3e-91, Organism=Saccharomyces cerevisiae, GI6323585, Length=481, Percent_Identity=39.9168399168399, Blast_Score=328, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6319352, Length=337, Percent_Identity=40.6528189910979, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6319353, Length=118, Percent_Identity=42.3728813559322, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI24641071, Length=480, Percent_Identity=39.1666666666667, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI24641073, Length=480, Percent_Identity=39.1666666666667, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI28571163, Length=440, Percent_Identity=39.5454545454545, Blast_Score=271, Evalue=7e-73,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51688; Mature: 51688
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAM CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH ARLGGIGIVHKNMDIETQVKEIAKVKKSESGVINDPIFIHAHKTLADAKAITDNYKISGV HHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCEECCE PVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTAHVSISLDEASDLMHKHKIEK EEECCCCEEEEEEECCCEEEECHHHHHHHHHHHHCCEEEEEEEEEEHHHHHHHHHHHHCC LPIVDKNNILKGLITIKDIQKRIEYPDANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCE LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISVGADAIKVGIGPGSIC EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHH TTRIVAGVGMPQVSAIDNCVEVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLA HHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHCHHHHHHHHHHC GTEESPGDFIIYQGRQYKSYRGMGSIGAMTKGSSDRYFQEGVASEKLVPEGIEGRVPYRG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC KVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAM CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH ARLGGIGIVHKNMDIETQVKEIAKVKKSESGVINDPIFIHAHKTLADAKAITDNYKISGV HHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCEECCE PVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTAHVSISLDEASDLMHKHKIEK EEECCCCEEEEEEECCCEEEECHHHHHHHHHHHHCCEEEEEEEEEEHHHHHHHHHHHHCC LPIVDKNNILKGLITIKDIQKRIEYPDANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCE LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISVGADAIKVGIGPGSIC EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHH TTRIVAGVGMPQVSAIDNCVEVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLA HHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHCHHHHHHHHHHC GTEESPGDFIIYQGRQYKSYRGMGSIGAMTKGSSDRYFQEGVASEKLVPEGIEGRVPYRG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC KVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]