| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is 109947697
Identifier: 109947697
GI number: 109947697
Start: 1013013
End: 1013846
Strand: Reverse
Name: 109947697
Synonym: Hac_1167
Alternate gene names: NA
Gene position: 1013846-1013013 (Counterclockwise)
Preceding gene: 109947698
Following gene: 109947696
Centisome position: 65.24
GC content: 36.81
Gene sequence:
>834_bases ATGTGTTCTAAAAAAATAAAAAATCTTATTTTATGTTTGAGCTTTGTATTCAATTTGCATGCTGAAGAGAATATAACCAA AGATAGAGGTGCCCCTATTCTTTCGGAAGAAAAACACCCCCAAACGCTAGAGCTTAATGAAGAGAAAAAAGAAGTTGCAA AGAGCGTTGATGAAAAAAGCCTGCTTGAAGAAATCCATAAGAAAAAACGCCAACTTTACATGCTCAAAGGGGAATTGCAT GAAAAAAATGAGGCCATCTTATTCCAGCAAATGGCTAAAACTAAGAGCGGTTTTTTTGTAGGGGCTATCCTTGGCGGTAT GAGGATTAACGCTCATCCTAACGCCCATTCTTATGATAATTTTAATATTACAGGAGGCATTCAAGCTTATCCTTTGCTGT ATGGTTTAAGGAGTGGGTATCAAAAGTATTTTACTAGTGGGATTAGTGGGTTACGCTTATATGGGGAGTATTTAGGGGGG GCAATGAAAGGGTTTCAAAGCGATTCTTTAGCCTCTTATCAAACGGCGAGCTTGAATATTGATCTGTTGATGGATAAGCC TATTGATAAAGAAAAAAGGTTTGCGTTAGGGATATTTGGAGGCGTTGGAGTGGGGTGGAATGGGATGTATCAAAATTTAA AAGAAATCAAAGAGTATTCGCAGCCCAATGCGTTTGGGTTAGTGTTAAATCTAGGGGTGAGCATGACGCTCAACCTCAAA CACCGCTTTGAATTAGCCCTAAAAATGCCCCCTTTAAAAGAAACTTCGCAAACCTTTTTATATTATTTTAAAAGCACTAA TATTTATTATATTAGTTACAACTATTTATTGTAA
Upstream 100 bases:
>100_bases ATTGAATTTGGATTAAAAATTTTGAATAATTTCCCTTTTTTACAATCCAGCTCTTCAAAAGAGACTTGGTGGGGAGCTAT AGCAAACATTGGGTATCAAT
Downstream 100 bases:
>100_bases GGGCTAAAATGTTGAAACTTAAATATTGTTTGATTTATCTAGTGCTCATTATGGGACTTCAAGCGACAGATTATGACAAT TTAGAAGAAGAAAACCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MCSKKIKNLILCLSFVFNLHAEENITKDRGAPILSEEKHPQTLELNEEKKEVAKSVDEKSLLEEIHKKKRQLYMLKGELH EKNEAILFQQMAKTKSGFFVGAILGGMRINAHPNAHSYDNFNITGGIQAYPLLYGLRSGYQKYFTSGISGLRLYGEYLGG AMKGFQSDSLASYQTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEIKEYSQPNAFGLVLNLGVSMTLNLK HRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL
Sequences:
>Translated_277_residues MCSKKIKNLILCLSFVFNLHAEENITKDRGAPILSEEKHPQTLELNEEKKEVAKSVDEKSLLEEIHKKKRQLYMLKGELH EKNEAILFQQMAKTKSGFFVGAILGGMRINAHPNAHSYDNFNITGGIQAYPLLYGLRSGYQKYFTSGISGLRLYGEYLGG AMKGFQSDSLASYQTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEIKEYSQPNAFGLVLNLGVSMTLNLK HRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL >Mature_277_residues MCSKKIKNLILCLSFVFNLHAEENITKDRGAPILSEEKHPQTLELNEEKKEVAKSVDEKSLLEEIHKKKRQLYMLKGELH EKNEAILFQQMAKTKSGFFVGAILGGMRINAHPNAHSYDNFNITGGIQAYPLLYGLRSGYQKYFTSGISGLRLYGEYLGG AMKGFQSDSLASYQTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEIKEYSQPNAFGLVLNLGVSMTLNLK HRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31459; Mature: 31459
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSKKIKNLILCLSFVFNLHAEENITKDRGAPILSEEKHPQTLELNEEKKEVAKSVDEKS CCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHH LLEEIHKKKRQLYMLKGELHEKNEAILFQQMAKTKSGFFVGAILGGMRINAHPNAHSYDN HHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHCCEEEECCCCCCCCCC FNITGGIQAYPLLYGLRSGYQKYFTSGISGLRLYGEYLGGAMKGFQSDSLASYQTASLNI EEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE DLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEIKEYSQPNAFGLVLNLGVSMTLNLK EEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEE HRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL EEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEECC >Mature Secondary Structure MCSKKIKNLILCLSFVFNLHAEENITKDRGAPILSEEKHPQTLELNEEKKEVAKSVDEKS CCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHH LLEEIHKKKRQLYMLKGELHEKNEAILFQQMAKTKSGFFVGAILGGMRINAHPNAHSYDN HHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHCCEEEECCCCCCCCCC FNITGGIQAYPLLYGLRSGYQKYFTSGISGLRLYGEYLGGAMKGFQSDSLASYQTASLNI EEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE DLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEIKEYSQPNAFGLVLNLGVSMTLNLK EEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEE HRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL EEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA