| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947698
Identifier: 109947698
GI number: 109947698
Start: 1013836
End: 1014558
Strand: Reverse
Name: 109947698
Synonym: Hac_1168
Alternate gene names: NA
Gene position: 1014558-1013836 (Counterclockwise)
Preceding gene: 109947707
Following gene: 109947697
Centisome position: 65.29
GC content: 36.79
Gene sequence:
>723_bases TTGGGTTTTAACAAACAAGCTGTTTTATTGTCTTTAATGGGGTTTTATACGGGGTTGAATGCACTTGATTATGACACCCT AGATCCGAAATATTACAAATACATCAAGTATTATAAAGCCTATGAAGACAAAGAAGTGGAAGAATTAATTAAAAACTTAA AGAGAGCGAACGCTAAAAGTGGGCTTATTTTAGGGATCAATACTGGGTTTTTTTATAACCACGAAATCATGGTCAAAACC AATAGTTCTAGCATTACTGGGAATATTTTAAATTATTTGTTTGCTTATGGCTTGCGTTTTGGCTATCAAACCTTTAGGCC GTCGTTTTTTGCACGTTTGGTTAGACCCAATATTATTGGTAGGCGCATTTATATCCAATATTATGGAGGGGTTCCTAAAA AAGCGGACTTTGGGAGCGTTGGGTTTCAATCGGTCATGTTGAATGGGGATTTTTTATTGGATTTTCCTTTGCCTTTTGTG GGGAAATACCTTTACATGGGAGGGTATATGGGTTTAGGTTTAGGGGTTGTGTCGCATGGGATCAATTATACGGCGGAATG GGGGATGTCTTTTAACGCAGGATTAGCGCTAACCATATTGGAAAAAAACCGCATTGAATTTGGATTAAAAATTTTGAATA ATTTCCCTTTTTTACAATCCAGCTCTTCAAAAGAGACTTGGTGGGGAGCTATAGCAAACATTGGGTATCAATATGTGTTC TAA
Upstream 100 bases:
>100_bases GGGTGGGTAAAAATTTTACTCCATTTTTAATTGGGGATTTTGATTATTTTAGTATAATTGAAAGAAACTTTTAACAAACA ATTCAAGGGATTTGGCGATT
Downstream 100 bases:
>100_bases AAAAATAAAAAATCTTATTTTATGTTTGAGCTTTGTATTCAATTTGCATGCTGAAGAGAATATAACCAAAGATAGAGGTG CCCCTATTCTTTCGGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGFNKQAVLLSLMGFYTGLNALDYDTLDPKYYKYIKYYKAYEDKEVEELIKNLKRANAKSGLILGINTGFFYNHEIMVKT NSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVRPNIIGRRIYIQYYGGVPKKADFGSVGFQSVMLNGDFLLDFPLPFV GKYLYMGGYMGLGLGVVSHGINYTAEWGMSFNAGLALTILEKNRIEFGLKILNNFPFLQSSSSKETWWGAIANIGYQYVF
Sequences:
>Translated_240_residues MGFNKQAVLLSLMGFYTGLNALDYDTLDPKYYKYIKYYKAYEDKEVEELIKNLKRANAKSGLILGINTGFFYNHEIMVKT NSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVRPNIIGRRIYIQYYGGVPKKADFGSVGFQSVMLNGDFLLDFPLPFV GKYLYMGGYMGLGLGVVSHGINYTAEWGMSFNAGLALTILEKNRIEFGLKILNNFPFLQSSSSKETWWGAIANIGYQYVF >Mature_239_residues GFNKQAVLLSLMGFYTGLNALDYDTLDPKYYKYIKYYKAYEDKEVEELIKNLKRANAKSGLILGINTGFFYNHEIMVKTN SSSITGNILNYLFAYGLRFGYQTFRPSFFARLVRPNIIGRRIYIQYYGGVPKKADFGSVGFQSVMLNGDFLLDFPLPFVG KYLYMGGYMGLGLGVVSHGINYTAEWGMSFNAGLALTILEKNRIEFGLKILNNFPFLQSSSSKETWWGAIANIGYQYVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27312; Mature: 27181
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNKQAVLLSLMGFYTGLNALDYDTLDPKYYKYIKYYKAYEDKEVEELIKNLKRANAKS CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GLILGINTGFFYNHEIMVKTNSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVRPNIIG CEEEEEECCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHCCCCCC RRIYIQYYGGVPKKADFGSVGFQSVMLNGDFLLDFPLPFVGKYLYMGGYMGLGLGVVSHG EEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCC INYTAEWGMSFNAGLALTILEKNRIEFGLKILNNFPFLQSSSSKETWWGAIANIGYQYVF CCCEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEEECC >Mature Secondary Structure GFNKQAVLLSLMGFYTGLNALDYDTLDPKYYKYIKYYKAYEDKEVEELIKNLKRANAKS CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GLILGINTGFFYNHEIMVKTNSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVRPNIIG CEEEEEECCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHCCCCCC RRIYIQYYGGVPKKADFGSVGFQSVMLNGDFLLDFPLPFVGKYLYMGGYMGLGLGVVSHG EEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCC INYTAEWGMSFNAGLALTILEKNRIEFGLKILNNFPFLQSSSSKETWWGAIANIGYQYVF CCCEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA