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The map label for this gene is 109947690

Identifier: 109947690

GI number: 109947690

Start: 1007570

End: 1007797

Strand: Reverse

Name: 109947690

Synonym: Hac_1160

Alternate gene names: NA

Gene position: 1007797-1007570 (Counterclockwise)

Preceding gene: 109947691

Following gene: 109947689

Centisome position: 64.85

GC content: 34.21

Gene sequence:

>228_bases
ATGTGTGTGGCGTGCAGAATGTGCCAATCTCAAAAGGATTTATTGCGTTTGAAAAGTTTTGAAAATCAAATCATGGAGTT
TGACGGCAAGGGTCGTAGTTTTTATGTGTGTGAAAATTGTTTGAAGAATGGAGAAAAAAAGTTGTTGAAAGCGATTTTAA
AAATAAAGAATGCCCCAAAAGATACCAAAAATATCATCAATTGGATTAAGGAGAGAAGCATAGCATGA

Upstream 100 bases:

>100_bases
AAGCAGGTTTTGAGTAAGAAATTCCCTAAATTTAGGGTGGCGGTTTTAGATTTTGATAATGATGGAGTCCTTATTGAGAA
AGACTGAAATTAAAACCCGC

Downstream 100 bases:

>100_bases
GTGGTATGGTTGATCTAAAAGAGTTTCTAGCCGAGCTTGGCAAGACTCAAAAAGAGCTTAAAAATGTGATCGAGCAAGCT
AAAGATATTGGTTTGGAGCT

Product: nucleic acid binding transriptional terminator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MCVACRMCQSQKDLLRLKSFENQIMEFDGKGRSFYVCENCLKNGEKKLLKAILKIKNAPKDTKNIINWIKERSIA

Sequences:

>Translated_75_residues
MCVACRMCQSQKDLLRLKSFENQIMEFDGKGRSFYVCENCLKNGEKKLLKAILKIKNAPKDTKNIINWIKERSIA
>Mature_75_residues
MCVACRMCQSQKDLLRLKSFENQIMEFDGKGRSFYVCENCLKNGEKKLLKAILKIKNAPKDTKNIINWIKERSIA

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8726; Mature: 8726

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVACRMCQSQKDLLRLKSFENQIMEFDGKGRSFYVCENCLKNGEKKLLKAILKIKNAPK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
DTKNIINWIKERSIA
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MCVACRMCQSQKDLLRLKSFENQIMEFDGKGRSFYVCENCLKNGEKKLLKAILKIKNAPK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
DTKNIINWIKERSIA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA