| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is thrB [H]
Identifier: 109947691
GI number: 109947691
Start: 1007811
End: 1008692
Strand: Reverse
Name: thrB [H]
Synonym: Hac_1161
Alternate gene names: 109947691
Gene position: 1008692-1007811 (Counterclockwise)
Preceding gene: 109947692
Following gene: 109947690
Centisome position: 64.91
GC content: 41.16
Gene sequence:
>882_bases TTGGTAGTGAGTGTTCCTGCAACAAGTGCGAATTTAGGCCCCGGTTTTGATTGCTTGGGTTTGAGCTTGAATTTACGCAA TCGTTTTTTTATTGAACCTAGCAGTTTTCATGCCGTGAAATTGGTTGGGGAGGGCGAAGGGATCCCTAAATTTTTAACCA ACAATATTTTTACTAAAGTGTTTTATGAGATTTTAAAAAAGCATGGGCATGACGGCTCGTTTAAGTTTTTATTGCATAAT AAAGTCCCTATTACAAGGGGCATGGGGTCTAGCTCAGCGATGATTGTAGGTGCGGTCGCTTCGGCGTTTGCGTTTTTAGG CTTTCCTTTTGACAGAGAAAATATTGTCAATACCGCTTTAATTTATGAAAACCATCCAGATAATATCACCCCAGCGGTGT TTGGGGGGTATAATGCAGCGTTTGTGGAAAAAAAGAAAGTGATAAGTTTGAAAACCAAAATCCCTTCTTTTTTAAAAGCG GTGATGGTGATCCCTAATAGAGTCGTTTCTACCAAGCAATCGCGCCACCTTTTGCCCAAGCGTTACAGCGTGCAAGAGAG CGTTTTTAATCTTTCGCATGCGAGCTTGATGACCATGGCGATTGTGCAAGGCAAGTGGGATTTATTGCGTTGTTGCGCAA AAGATAGGATGCATCAAAACAAGCGCATGCAAACTTATCCTGTGTTGTTTGCGATCCAAAAGCTTGCTTTAGAAAATAAT GCCTTAATGAGCACGCTTTCAGGGAGCGGTTCGTCGTTTTTTAACATGTGTTATGAAGAAGACGCCCCTAAGTTGAAGCA GGTTTTGAGTAAGAAATTCCCTAAATTTAGGGTGGCGGTTTTAGATTTTGATAATGATGGAGTCCTTATTGAGAAAGACT GA
Upstream 100 bases:
>100_bases ATTCACCCAATCCAACACGCCGTTTTACATTTTACCTCCTATTTAGTGTATAATACGGACTTAAAAAAAGAATAGGGTAT CAAAAATAGGGGTTTAGAAT
Downstream 100 bases:
>100_bases AATTAAAACCCGCATGTGTGTGGCGTGCAGAATGTGCCAATCTCAAAAGGATTTATTGCGTTTGAAAAGTTTTGAAAATC AAATCATGGAGTTTGACGGC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKVFYEILKKHGHDGSFKFLLHN KVPITRGMGSSSAMIVGAVASAFAFLGFPFDRENIVNTALIYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKA VMVIPNRVVSTKQSRHLLPKRYSVQESVFNLSHASLMTMAIVQGKWDLLRCCAKDRMHQNKRMQTYPVLFAIQKLALENN ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD
Sequences:
>Translated_293_residues MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKVFYEILKKHGHDGSFKFLLHN KVPITRGMGSSSAMIVGAVASAFAFLGFPFDRENIVNTALIYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKA VMVIPNRVVSTKQSRHLLPKRYSVQESVFNLSHASLMTMAIVQGKWDLLRCCAKDRMHQNKRMQTYPVLFAIQKLALENN ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD >Mature_293_residues MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKVFYEILKKHGHDGSFKFLLHN KVPITRGMGSSSAMIVGAVASAFAFLGFPFDRENIVNTALIYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKA VMVIPNRVVSTKQSRHLLPKRYSVQESVFNLSHASLMTMAIVQGKWDLLRCCAKDRMHQNKRMQTYPVLFAIQKLALENN ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=287, Percent_Identity=24.7386759581882, Blast_Score=86, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321814, Length=350, Percent_Identity=26, Blast_Score=107, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 32617; Mature: 32617
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00627 GHMP_KINASES_ATP ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKV CEEECCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH FYEILKKHGHDGSFKFLLHNKVPITRGMGSSSAMIVGAVASAFAFLGFPFDRENIVNTAL HHHHHHHCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEE IYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKAVMVIPNRVVSTKQSRHLLPK EEECCCCCCCCCEECCCCEEEEHHHHEEEHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCC RYSVQESVFNLSHASLMTMAIVQGKWDLLRCCAKDRMHQNKRMQTYPVLFAIQKLALENN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD HHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEECC >Mature Secondary Structure MVVSVPATSANLGPGFDCLGLSLNLRNRFFIEPSSFHAVKLVGEGEGIPKFLTNNIFTKV CEEECCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH FYEILKKHGHDGSFKFLLHNKVPITRGMGSSSAMIVGAVASAFAFLGFPFDRENIVNTAL HHHHHHHCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEE IYENHPDNITPAVFGGYNAAFVEKKKVISLKTKIPSFLKAVMVIPNRVVSTKQSRHLLPK EEECCCCCCCCCEECCCCEEEEHHHHEEEHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCC RYSVQESVFNLSHASLMTMAIVQGKWDLLRCCAKDRMHQNKRMQTYPVLFAIQKLALENN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ALMSTLSGSGSSFFNMCYEEDAPKLKQVLSKKFPKFRVAVLDFDNDGVLIEKD HHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]