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The map label for this gene is fliM [H]

Identifier: 109947667

GI number: 109947667

Start: 985371

End: 986435

Strand: Reverse

Name: fliM [H]

Synonym: Hac_1135

Alternate gene names: 109947667

Gene position: 986435-985371 (Counterclockwise)

Preceding gene: 109947668

Following gene: 109947666

Centisome position: 63.48

GC content: 40.47

Gene sequence:

>1065_bases
ATGGCTGATATTTTAAGCCAAGAAGAAATTGATGCACTTTTAGAAGTTGTTGATGAAAATGTGGATATTCAAAATGTCCA
AAAAAAGGATATTACTCCGCAACGCAGTGTCACCCTCTATGATTTCAAACGCCCTAATCGTGTGAGCAAGGAGCAACTGC
GCTCTTTTAGAAGTATCCATGACAAAATGGCTAGGAATCTTTCCAGTCAAATCTCTTCTATCATGCGTTCTATTGTGGAG
ATCCAGCTCCATAGCGTGGATCAAATGACTTATGGGGAATTTTTGATGAGCTTGCCTAGCCCTACAAGTTTTAATGTCTT
TTCTATGAAGCCTATGGGGGGAACGGGGGTTTTAGAAATCAATCCTAGCATCGCTTTCCCTATGATTGATAGGTTGTTAG
GGGGTAAGGGGAGTGCGTATGATCAAAATAGAGAGTTTAGCGACATTGAATTGAATTTATTGGATACGATTTTACGCCAA
GTGATGCAAATTTTAAAAGAAGTGTGGTCGCCTGTGGTGGAGATGTATCCTACGATTGACGCTAAAGAGTCCAGTGCGAA
TGTGGTTCAAATCGTCGCTCAGAATGAAATTTCTATCATGGTGGTTTTAGAAATCATTATCGGGCATAGCCGTGGGATGA
TGAATATTTGCTATCCGGTGATTTCCATTGAAAGCATTCTTTCTAAAATGGGGAGTAGGGATTTCATGCTTTCAGAAACC
AACTCCAAAAAGAGCCGTAACAGGGAATTGCAAGCGTTATTAAGCAGCGTGAGCGTGGATATGATCGTGTTGCTTGGTGC
GGTGGAATTGAGCTTGAAAGAAATGTTGGATTTAGATGTGGGAGATACCATTCGTTTGAATAAGGTCGCCAATGATGAAG
TGAGCGTGTATGTGCATAAAAAAAAGCGTTATTTAGCGAGCGTGGGTTTTCAAGGGTATAGGAAAACCATTCAAATTAAA
GAGGTGGTTTATAGCGAAAAAGAGCACACTAAAGAGATTTTAGAAATGCTAGAAGAACAGCGCAGAGATAAAGTGGGCGA
TGTTATGAAGATAGAAGAAGAGTGA

Upstream 100 bases:

>100_bases
TTGAGCGAGATTAAAGAGATTTTAGGCATTACCGAATCGCGCATTTCTCAAATCATCAAAGAAGCGATTAAAAAGGTGCG
TCAATCTTTAGGAGCTAGTC

Downstream 100 bases:

>100_bases
GCGATGCAAGATTTTATTAAGATTTTTATTCAAGAGGTTGTCTCTACTTTAGAAGGGTTAGTGGGTAAGACTCCAAGCGT
GGGGTTAGAAAAAGAGGTTT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MADILSQEEIDALLEVVDENVDIQNVQKKDITPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQISSIMRSIVE
IQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQ
VMQILKEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSET
NSKKSRNRELQALLSSVSVDMIVLLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHKKKRYLASVGFQGYRKTIQIK
EVVYSEKEHTKEILEMLEEQRRDKVGDVMKIEEE

Sequences:

>Translated_354_residues
MADILSQEEIDALLEVVDENVDIQNVQKKDITPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQISSIMRSIVE
IQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQ
VMQILKEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSET
NSKKSRNRELQALLSSVSVDMIVLLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHKKKRYLASVGFQGYRKTIQIK
EVVYSEKEHTKEILEMLEEQRRDKVGDVMKIEEE
>Mature_353_residues
ADILSQEEIDALLEVVDENVDIQNVQKKDITPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQISSIMRSIVEI
QLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQV
MQILKEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSETN
SKKSRNRELQALLSSVSVDMIVLLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHKKKRYLASVGFQGYRKTIQIKE
VVYSEKEHTKEILEMLEEQRRDKVGDVMKIEEE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=294, Percent_Identity=25.1700680272109, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 40244; Mature: 40113

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADILSQEEIDALLEVVDENVDIQNVQKKDITPQRSVTLYDFKRPNRVSKEQLRSFRSIH
CCCCCCHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DKMARNLSSQISSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEE
NPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMYPTID
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSET
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
NSKKSRNRELQALLSSVSVDMIVLLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEH
KKRYLASVGFQGYRKTIQIKEVVYSEKEHTKEILEMLEEQRRDKVGDVMKIEEE
HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
ADILSQEEIDALLEVVDENVDIQNVQKKDITPQRSVTLYDFKRPNRVSKEQLRSFRSIH
CCCCCHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DKMARNLSSQISSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEE
NPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMYPTID
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSET
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
NSKKSRNRELQALLSSVSVDMIVLLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEH
KKRYLASVGFQGYRKTIQIKEVVYSEKEHTKEILEMLEEQRRDKVGDVMKIEEE
HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]