| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947616
Identifier: 109947616
GI number: 109947616
Start: 937515
End: 938000
Strand: Reverse
Name: 109947616
Synonym: Hac_1081
Alternate gene names: NA
Gene position: 938000-937515 (Counterclockwise)
Preceding gene: 109947617
Following gene: 109947615
Centisome position: 60.36
GC content: 37.65
Gene sequence:
>486_bases ATGACCATCAAAGTTTTTTCGCCCCAATATCTTAGTGAATTAGAAGATTTTTATGCCAAACGCATCGCTGATAACCCTTT AGGGTTTATCCAACGATTGGATCTTTTGCCTAGCATTAGCGAGTTTGTTCAAAAATTGCACGAACATGGTGGGGAATTTT TTGAAATGAGAGATAATGGGAAGCTCATTGGGATTTGTGGGCTTAATCATGCCAATAAAAAAGAAGCAGAGTTGTGTAAA TTCCACATTGACACCACTTATCAATCTAAAGGGCTTGGTAAAAAACTCTATGAAAGCGTGGAGCGATACGCTTCTATTAA GGGCTATACTAAAATCTCTCTTCATGTGAGCAAGAGCCAGATCAAGGCATGCAACCTCTATCAAAAGCTAGGTTTTTTGC AAGTCAAAGAAGAGGATTGTGCGGTGAAATTGGGCAAAGAGACTTTAATTTTTCCTACGATTTTTATGGAAAAGATTTTG TCTTAA
Upstream 100 bases:
>100_bases CTTATAATAATACAAGATAGCGTTATTACTTTAAGCTAAAAATTGTTATCATTGCACTCATTGAAAGATTGAGTTATTTT ATCTCTAAAGTTAGGAAATC
Downstream 100 bases:
>100_bases TTGGTGCATCAATCATGCATACCTTATTTCAAATATTGCACTTTGATAAACACCGATCAATTAAAAGTAAATAAGTCTTA AAACAAACGCTCGTTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTIKVFSPQYLSELEDFYAKRIADNPLGFIQRLDLLPSISEFVQKLHEHGGEFFEMRDNGKLIGICGLNHANKKEAELCK FHIDTTYQSKGLGKKLYESVERYASIKGYTKISLHVSKSQIKACNLYQKLGFLQVKEEDCAVKLGKETLIFPTIFMEKIL S
Sequences:
>Translated_161_residues MTIKVFSPQYLSELEDFYAKRIADNPLGFIQRLDLLPSISEFVQKLHEHGGEFFEMRDNGKLIGICGLNHANKKEAELCK FHIDTTYQSKGLGKKLYESVERYASIKGYTKISLHVSKSQIKACNLYQKLGFLQVKEEDCAVKLGKETLIFPTIFMEKIL S >Mature_160_residues TIKVFSPQYLSELEDFYAKRIADNPLGFIQRLDLLPSISEFVQKLHEHGGEFFEMRDNGKLIGICGLNHANKKEAELCKF HIDTTYQSKGLGKKLYESVERYASIKGYTKISLHVSKSQIKACNLYQKLGFLQVKEEDCAVKLGKETLIFPTIFMEKILS
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18444; Mature: 18312
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKVFSPQYLSELEDFYAKRIADNPLGFIQRLDLLPSISEFVQKLHEHGGEFFEMRDNG CEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCC KLIGICGLNHANKKEAELCKFHIDTTYQSKGLGKKLYESVERYASIKGYTKISLHVSKSQ CEEEEECCCCCCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHH IKACNLYQKLGFLQVKEEDCAVKLGKETLIFPTIFMEKILS HHHHHHHHHHCCEEECCCCHHEEECCCCEEHHHHHHHHHCC >Mature Secondary Structure TIKVFSPQYLSELEDFYAKRIADNPLGFIQRLDLLPSISEFVQKLHEHGGEFFEMRDNG EEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCC KLIGICGLNHANKKEAELCKFHIDTTYQSKGLGKKLYESVERYASIKGYTKISLHVSKSQ CEEEEECCCCCCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHH IKACNLYQKLGFLQVKEEDCAVKLGKETLIFPTIFMEKILS HHHHHHHHHHCCEEECCCCHHEEECCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA