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The map label for this gene is glyQ [H]

Identifier: 109947571

GI number: 109947571

Start: 898926

End: 899822

Strand: Reverse

Name: glyQ [H]

Synonym: Hac_1036

Alternate gene names: 109947571

Gene position: 899822-898926 (Counterclockwise)

Preceding gene: 109947572

Following gene: 109947570

Centisome position: 57.91

GC content: 41.03

Gene sequence:

>897_bases
ATGCAAGATTTTTCAAGTTTATTATTAAAATTACAAGAATATTGGAAGAATCAAGGGTGTTTGGTGATCCAGCCTTATGA
TATCCCTGCAGGTGCGGGGACATTCCACCCGGCTACGCTTTTAAGGAGTTTGGATAAAAAGCCTTGGAATGTGGCGTATG
TTGCACCCTCTAGAAGGCCTACTGATGGGCGTTATGGGGAAAACCCTAACCGCTTGGGGAGTTATTACCAATTCCAAGTG
GTCATCAAGCCAAGCCCCTCTAATATCCAAGAATTGTATTTAAAGAGTTTAGAGGTGTTAGGGATAAACCTTAATGAGCA
TGATATACGATTTGTAGAAGACAATTGGGAGAGTCCCACTTTAGGGGCATGGGGGCTTGGTTGGGAAGTGTGGCTTGATG
GCATGGAGGTAACGCAATTCACTTATTTCCAACAAGTGGGTGGCATTTCTTGTAACCCTATCCCTGTAGAAATCACTTAC
GGATTAGAAAGATTGGCGATGTATGTCCAAAAGGTGGAAAATATTTTAGAGATTGAATGGGCTAAAAAGGATAATGAGAG
CGTGCGTTATGCACAAGTGCATTTAGAGAGCGAATATGAATTTAGCAAGTATCATTTTGAAGTAGCGAGCGTCAAAAGGC
TATTAGAAATGTTTAAAAACGCTCAAACAGAAGCCTTGCATTGCTTGGAAAACAAGCTCCCTCTACCGGCTTATGATTGG
GTGGTGTTATGCTCGCATTTTTTCAATATTTTAGACGCTAGAAAGGCGATTTCTGTGGCTGAAAGGCAAAATTATATCTT
ACAAATTAGGGATTTGGCTAAAGGGTGTGCAATTCTTTATAAAGGGCAAGAAGAAGAAAGAGAAGAGCGCTTGAAAAACG
CTCTCTCAAAGGCTTAA

Upstream 100 bases:

>100_bases
ATTTATACGCCCATTGCGAGCGAATTAGCCTTGCTTTTAAAGGGTAAAAGTGTGCTAGAGAGCATGAACGATTTGATTAG
ACGCGCTTAAAGGAGAGAGC

Downstream 100 bases:

>100_bases
AATGGCGTTAGTCAAAGAAGTGTTGGAAGTTTTAGGGTGTGTTTCGCCTTTTGAACTTCAGGAATCATGGGATAATAGCG
GGCTGAATTTAGGGAGTGAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQV
VIKPSPSNIQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGISCNPIPVEITY
GLERLAMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVKRLLEMFKNAQTEALHCLENKLPLPAYDW
VVLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAILYKGQEEEREERLKNALSKA

Sequences:

>Translated_298_residues
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQV
VIKPSPSNIQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGISCNPIPVEITY
GLERLAMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVKRLLEMFKNAQTEALHCLENKLPLPAYDW
VVLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAILYKGQEEEREERLKNALSKA
>Mature_298_residues
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQV
VIKPSPSNIQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGISCNPIPVEITY
GLERLAMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVKRLLEMFKNAQTEALHCLENKLPLPAYDW
VVLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAILYKGQEEEREERLKNALSKA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=284, Percent_Identity=60.9154929577465, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34476; Mature: 34476

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRP
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCC
TDGRYGENPNRLGSYYQFQVVIKPSPSNIQELYLKSLEVLGINLNEHDIRFVEDNWESPT
CCCCCCCCHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
LGAWGLGWEVWLDGMEVTQFTYFQQVGGISCNPIPVEITYGLERLAMYVQKVENILEIEW
CCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEEE
AKKDNESVRYAQVHLESEYEFSKYHFEVASVKRLLEMFKNAQTEALHCLENKLPLPAYDW
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
VVLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAILYKGQEEEREERLKNALSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRP
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCC
TDGRYGENPNRLGSYYQFQVVIKPSPSNIQELYLKSLEVLGINLNEHDIRFVEDNWESPT
CCCCCCCCHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
LGAWGLGWEVWLDGMEVTQFTYFQQVGGISCNPIPVEITYGLERLAMYVQKVENILEIEW
CCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEEE
AKKDNESVRYAQVHLESEYEFSKYHFEVASVKRLLEMFKNAQTEALHCLENKLPLPAYDW
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
VVLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAILYKGQEEEREERLKNALSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]