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The map label for this gene is 109947539

Identifier: 109947539

GI number: 109947539

Start: 872603

End: 873145

Strand: Reverse

Name: 109947539

Synonym: Hac_0998

Alternate gene names: NA

Gene position: 873145-872603 (Counterclockwise)

Preceding gene: 109947549

Following gene: 109947537

Centisome position: 56.19

GC content: 38.86

Gene sequence:

>543_bases
ATGTTAGATAAATTTAAAAAAATCGTTGGCGTGGGTGTGTTGGTGGGCTGTTTAGGGGTTTTGCAAGCTAAAAATAGCCT
ATTTGTCTTACCTTATGAGCAAAGAGACGCTTTGAACGCTTTAATTTCTGGGATTAGTAATGCTAGAGAGAGCGTGAAAA
TCGCTATTTATAGTTTCACGCACAGAGATATTGCAAGAGCGATTAAAAGCGTAGCGAGTAGGGGGGTTAAGGTGCAAATC
ATTTATGATTATGGGAGCAATCACAATAACAAGCAATCCACTATCGGCTATTTAGACAAATACCCTAACACTAAAGTGTG
TTTGTTGAATGGGCTTAAGGCGAGAAAGGGGAGTTATCATGGCATCATGCACCAAAAAGTGGCGATCATTGATGATAAAA
TCGTGTTTTTAGGATCGGCGAATTGGAGCAAAAATGCTTTTGAAAACAATTATGAAGTGCTTTTAAAAGCCGATGACACA
GAGACGATACTCAAAGCCAAGAGCTATTATCAAAAGATGCTAGAAAGCTGTGTGGGGTTTTAA

Upstream 100 bases:

>100_bases
CTCCTTATTTTTTATTAAAAACGCTTTTTAAGCTGTCAATCTTTACCACTTTTTTTAAATCTTTTATTATAATCAAAAAT
ACGCTTAATAAGGAACATTG

Downstream 100 bases:

>100_bases
AACCCTTTAGAAGTGGTAATTATACCCCACATAAAAGGCAAAGACCCTACGCATTTGAACATTGATCGTATCGCTTGTGT
AGTATTTGTTGTTGATGGTG

Product: nuclease NucT

Products: NA

Alternate protein names: Nuclease NucT; Phospholipase D Family Protein; Endonuclease; Edta-Resistant Nuclease

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLDKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQRDALNALISGISNARESVKIAIYSFTHRDIARAIKSVASRGVKVQI
IYDYGSNHNNKQSTIGYLDKYPNTKVCLLNGLKARKGSYHGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKADDT
ETILKAKSYYQKMLESCVGF

Sequences:

>Translated_180_residues
MLDKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQRDALNALISGISNARESVKIAIYSFTHRDIARAIKSVASRGVKVQI
IYDYGSNHNNKQSTIGYLDKYPNTKVCLLNGLKARKGSYHGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKADDT
ETILKAKSYYQKMLESCVGF
>Mature_180_residues
MLDKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQRDALNALISGISNARESVKIAIYSFTHRDIARAIKSVASRGVKVQI
IYDYGSNHNNKQSTIGYLDKYPNTKVCLLNGLKARKGSYHGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKADDT
ETILKAKSYYQKMLESCVGF

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI270265812, Length=122, Percent_Identity=28.6885245901639, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20056; Mature: 20056

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQRDALNALISGISNARESVKIAIYSFT
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEEH
HRDIARAIKSVASRGVKVQIIYDYGSNHNNKQSTIGYLDKYPNTKVCLLNGLKARKGSYH
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC
GIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKADDTETILKAKSYYQKMLESCVGF
CHHHHEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQRDALNALISGISNARESVKIAIYSFT
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEEH
HRDIARAIKSVASRGVKVQIIYDYGSNHNNKQSTIGYLDKYPNTKVCLLNGLKARKGSYH
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC
GIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKADDTETILKAKSYYQKMLESCVGF
CHHHHEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA