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The map label for this gene is yjiA [H]

Identifier: 109947549

GI number: 109947549

Start: 881745

End: 882722

Strand: Reverse

Name: yjiA [H]

Synonym: Hac_1014

Alternate gene names: 109947549

Gene position: 882722-881745 (Counterclockwise)

Preceding gene: 109947550

Following gene: 109947539

Centisome position: 56.81

GC content: 38.85

Gene sequence:

>978_bases
ATGCCAAAAATCCCTATCACGCTCATCACAGGTTTTTTAGGGAGCGGTAAAACGAGTTTTTTAAGCGAATATTTAAATCA
ATTTAACCACCAAGGCGTAGCTTTAATTATCAATGAAATCGGTCAAGCCGCCTTGGATCAACGTATTTTAAGCGTGCATT
ATTGCGATGAAAAAATGCTTTATCTTAACGCAGGGTGTGTGTGTTGTAACAAACGCTTAGATTTAGTGGAGTCTCTAAAA
GATACGATCAATCTTTATGAATCACGCGGCGAAATTTTAAGGCGTATCATCATTGAAACCACCGGCTTAGCCAACCCAAC
ACCGATTTTATGGACGATTTTGAGCGACACCTTTTTAGGGGCACATTTTGAAGTTCAAAGCGTGATCGTTTGCGTGGATG
CATTGAACGCTAAAATGCACCTAACAAACAACGAAGCTAAAGAGCAAATCATTTTTGCTGATAGCGTTTTATTGACCAAA
ACGGACTTACAAAACGATAGTGCGGCTTTAGCAAAATTAAGAGAACAAATACAAGCCATCAACCCTAGCACGGAAATTTT
TGACAAGAAAAATATAGAGAAAAGCATAGATTATGAAAATCTTTTCTCGCACGAAAAAGGGGAGCGAAAATTTGTGCTGC
CAACACTAAAAAATCCGCACTCGCAAGGCTTTGAGACTTTAAGCATGAGTTTTGAAGAGGCGATGGAATGGAGCGCGTTT
GGGATTTGGCTGAGTTTGTTATTGTATAAATACGGCACACAGATTTTACGCATAAAGGGGATTATTGACATTGGGGAGGA
TTTTTTAGTGAGCATTAACGGCGTGATGCATGCAATTTATCCGCCCAAACACATTTTAAAGGATACTAGCGGCTCCACTC
TCGTTTTTATCACACGCCATTTAGAGCGTGAAAAAATCTTAAATTCCTTAAAGGGTTTTAAAAATTTGCTTGGTATCAAG
GGTTTTGAAACGCAATAA

Upstream 100 bases:

>100_bases
ATTTGTGGGATAAAGCGCAAAATTTAGCCAAAAAAGAGATGGACGCCTTAGATTCTAATCTATTGGCGTTTTTAAACCAC
TATACAAACACCATTTACTA

Downstream 100 bases:

>100_bases
TTTTTAATTTTATTAAAATGTAAAAAATGCTTTTATAATTTTTAAAATAAATATATAAAAGAGTTTGAAAGTAATATTTT
CTTAAGGTGATCTTGTGGGG

Product: cobalamin synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MPKIPITLITGFLGSGKTSFLSEYLNQFNHQGVALIINEIGQAALDQRILSVHYCDEKMLYLNAGCVCCNKRLDLVESLK
DTINLYESRGEILRRIIIETTGLANPTPILWTILSDTFLGAHFEVQSVIVCVDALNAKMHLTNNEAKEQIIFADSVLLTK
TDLQNDSAALAKLREQIQAINPSTEIFDKKNIEKSIDYENLFSHEKGERKFVLPTLKNPHSQGFETLSMSFEEAMEWSAF
GIWLSLLLYKYGTQILRIKGIIDIGEDFLVSINGVMHAIYPPKHILKDTSGSTLVFITRHLEREKILNSLKGFKNLLGIK
GFETQ

Sequences:

>Translated_325_residues
MPKIPITLITGFLGSGKTSFLSEYLNQFNHQGVALIINEIGQAALDQRILSVHYCDEKMLYLNAGCVCCNKRLDLVESLK
DTINLYESRGEILRRIIIETTGLANPTPILWTILSDTFLGAHFEVQSVIVCVDALNAKMHLTNNEAKEQIIFADSVLLTK
TDLQNDSAALAKLREQIQAINPSTEIFDKKNIEKSIDYENLFSHEKGERKFVLPTLKNPHSQGFETLSMSFEEAMEWSAF
GIWLSLLLYKYGTQILRIKGIIDIGEDFLVSINGVMHAIYPPKHILKDTSGSTLVFITRHLEREKILNSLKGFKNLLGIK
GFETQ
>Mature_324_residues
PKIPITLITGFLGSGKTSFLSEYLNQFNHQGVALIINEIGQAALDQRILSVHYCDEKMLYLNAGCVCCNKRLDLVESLKD
TINLYESRGEILRRIIIETTGLANPTPILWTILSDTFLGAHFEVQSVIVCVDALNAKMHLTNNEAKEQIIFADSVLLTKT
DLQNDSAALAKLREQIQAINPSTEIFDKKNIEKSIDYENLFSHEKGERKFVLPTLKNPHSQGFETLSMSFEEAMEWSAFG
IWLSLLLYKYGTQILRIKGIIDIGEDFLVSINGVMHAIYPPKHILKDTSGSTLVFITRHLEREKILNSLKGFKNLLGIKG
FETQ

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=334, Percent_Identity=27.5449101796407, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI148727351, Length=334, Percent_Identity=27.8443113772455, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI223941779, Length=321, Percent_Identity=28.0373831775701, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI33469141, Length=334, Percent_Identity=27.2455089820359, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI146231952, Length=334, Percent_Identity=27.2455089820359, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI223941776, Length=323, Percent_Identity=26.3157894736842, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI119120938, Length=319, Percent_Identity=26.3322884012539, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI87082430, Length=325, Percent_Identity=28.3076923076923, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324356, Length=207, Percent_Identity=26.0869565217391, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 36636; Mature: 36505

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIPITLITGFLGSGKTSFLSEYLNQFNHQGVALIINEIGQAALDQRILSVHYCDEKML
CCCCCHHHEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEE
YLNAGCVCCNKRLDLVESLKDTINLYESRGEILRRIIIETTGLANPTPILWTILSDTFLG
EEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
AHFEVQSVIVCVDALNAKMHLTNNEAKEQIIFADSVLLTKTDLQNDSAALAKLREQIQAI
CCHHHHHHHHHHHHCCCEEEECCCCHHHEEEEECCEEEEECCCCCCHHHHHHHHHHHHHC
NPSTEIFDKKNIEKSIDYENLFSHEKGERKFVLPTLKNPHSQGFETLSMSFEEAMEWSAF
CCCHHHHHHHCCHHHCCHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
GIWLSLLLYKYGTQILRIKGIIDIGEDFLVSINGVMHAIYPPKHILKDTSGSTLVFITRH
HHHHHHHHHHHCCCEEEEEEEHCCCHHHHEEHHHHEEECCCCHHHHCCCCCCEEEEEEHH
LEREKILNSLKGFKNLLGIKGFETQ
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PKIPITLITGFLGSGKTSFLSEYLNQFNHQGVALIINEIGQAALDQRILSVHYCDEKML
CCCCHHHEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEE
YLNAGCVCCNKRLDLVESLKDTINLYESRGEILRRIIIETTGLANPTPILWTILSDTFLG
EEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
AHFEVQSVIVCVDALNAKMHLTNNEAKEQIIFADSVLLTKTDLQNDSAALAKLREQIQAI
CCHHHHHHHHHHHHCCCEEEECCCCHHHEEEEECCEEEEECCCCCCHHHHHHHHHHHHHC
NPSTEIFDKKNIEKSIDYENLFSHEKGERKFVLPTLKNPHSQGFETLSMSFEEAMEWSAF
CCCHHHHHHHCCHHHCCHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
GIWLSLLLYKYGTQILRIKGIIDIGEDFLVSINGVMHAIYPPKHILKDTSGSTLVFITRH
HHHHHHHHHHHCCCEEEEEEEHCCCHHHHEEHHHHEEECCCCHHHHCCCCCCEEEEEEHH
LEREKILNSLKGFKNLLGIKGFETQ
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]