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The map label for this gene is flgH [H]

Identifier: 109947537

GI number: 109947537

Start: 871032

End: 871730

Strand: Reverse

Name: flgH [H]

Synonym: Hac_0996

Alternate gene names: 109947537

Gene position: 871730-871032 (Counterclockwise)

Preceding gene: 109947539

Following gene: 109947536

Centisome position: 56.1

GC content: 39.34

Gene sequence:

>699_bases
ATGAAAAAAGCGCTTTGTATAGGGGCTATTTTGTTGAGCATGTCAGCCAATGAGCCTAAAATTGATTTTAACCCTCCTAA
TTATGTAGAAGAAACCCCCTCTAAAGAGTTTATCCCAGAATTGAATAAGTTAGGGAGTTTGTTTGGGCAAGGCGAGCGCC
CCTTATTTGCGGATAGGAGAGCGATGAAGCCTAATGATTTGATCACAATCATTGTCTCTGAAAAAGCGAGTGCGAATTAT
TCTAGCTCCAAAGATTATAAAAGTGCATCAGGGGGTAATTCCACGCCCCCAAGGCTCACTTATAACGGTCTAGATGAGAA
AAAGAAAAAAGAAGCAGAGTATTTAGACGATAAGAATAATTACAATTTCACTAAATCTAGCAATAACACGAATTTTAAAG
GTGGTGGCTCGCAAAAAAAGAGCGAAGATTTAGAGATCGTGTTGAGCGCTCGCATTATTAAAGTGCTAGAAAATGGGAAT
TATTTCATTTATGGCAATAAGGAAGTGCTAGTGGATGGGGAAAAGCAAGTCCTTAAAGTGAGTGGGGTGATCCGCCCTTA
TGATATTGAAAGGAATAACACCATCCAATCCAAGTTTTTAGCCGACGCTAAGATTGAATACACGAATTTAGGGCATTTGA
GCGATTCTAACAAAAAGAAATTCGCTGCTGATGCGATGGAAACCCAAATGCCTTATTGA

Upstream 100 bases:

>100_bases
TGTTATCTGATAGATTTTACAATAACTTGCTCCAAATTAAGCATTTATTTCTTATAAGAGAGTATAATTTAAGACTTAAA
ATAGTAAATAAGGCTAGTGA

Downstream 100 bases:

>100_bases
AAAGAGCGTTTAAAAATATAACTATGAGAGTGATCGCTATTGTTTTGGCTAGAAGTTCTAGTAAAAGGATCAAGCATAAA
AATACTATAGATTTTTTCAA

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKALCIGAILLSMSANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANY
SSSKDYKSASGGNSTPPRLTYNGLDEKKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGN
YFIYGNKEVLVDGEKQVLKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY

Sequences:

>Translated_232_residues
MKKALCIGAILLSMSANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANY
SSSKDYKSASGGNSTPPRLTYNGLDEKKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGN
YFIYGNKEVLVDGEKQVLKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
>Mature_232_residues
MKKALCIGAILLSMSANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANY
SSSKDYKSASGGNSTPPRLTYNGLDEKKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGN
YFIYGNKEVLVDGEKQVLKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=175, Percent_Identity=29.7142857142857, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25914; Mature: 25914

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALCIGAILLSMSANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRR
CCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCC
AMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGLDEKKKKEAEYLDDKNN
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC
YNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEKQVLKV
CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCHHEEEE
SGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
CCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKALCIGAILLSMSANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRR
CCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCC
AMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGLDEKKKKEAEYLDDKNN
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC
YNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEKQVLKV
CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCHHEEEE
SGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
CCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]