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The map label for this gene is hofC

Identifier: 109947279

GI number: 109947279

Start: 619297

End: 620883

Strand: Direct

Name: hofC

Synonym: Hac_0705

Alternate gene names: NA

Gene position: 619297-620883 (Clockwise)

Preceding gene: 109947277

Following gene: 109947280

Centisome position: 39.85

GC content: 43.29

Gene sequence:

>1587_bases
ATGAAATTAAAAAAACGAAAAGTTGCTACCGCATTGCTCAAGCGTTTGACACTACCGCTATTATTTACGACGGGTTCGTT
AGGAGCAATCACTTACGAGGTGCATGGGGATTTTATTAACTTCTCTAAAGTGGGTTTTAACCACTCGCCTATCAACCCCG
TTAAAGGTATTTATCCTACGGAGACTTTTGTCAATCTTACCGGTAAGATAGAGGGGTCTGTGCATTTGGGTAAGGGTTGG
AGCGTGAATTTAGGCGGTGTTTTAGGCGGACAAGTTTATGATAGCACTAGATACGATAGATGGGCGAAAGATTTTACCCC
TCCAAGCTATTGGGATAAAACTTCGTGTGGCACTGATTCTATGAGTCTTTGTATGAACGCAACTAAAATGTGGGAACAGC
AAGGGCCAGGCGGTATTATTGACCCTAGAGGTATTGGCTATATGTATATGGGTGAGTGGAACGGCTTATTCCCTAACTAT
TATCCGGCTAACGCCTACTTGCCTGGGCATTCAAGACGCTACGAAGTTTATAAAGCGAATCTTACCTATGATAGCAGTAG
GGTCCATATGGTAATGGGGCGCTTTGATGTTACCGAGCAAGAGCAAATGGATTGGATTTATCAATTGTTCCAAGGTTTTT
ATGGGACTTTCAAGCTTACTAAGAACATGAAATTCTTGCTCTTTAGCAGTTGGGGTCGTGGTATCGCTGATGGTCAGTGG
CTATTCCCTATCTATCGTGAAAAGCCTTGGGGTATTCATAAGGCCGGTATCATTTATCGCCCTACAAAGAATTTATTGAT
CCACCCTTATGTGTATCTTATCCCAGAGGTAGGTACATTGCCCGGCGTTAAAATAGAATATGATACCAATCCTGATTTCA
GAGGTATAGGCATTAGAAATAAAACGACTTTCTATGGATTGTATGACTATCGTTGGAATAATGCTGAATACGGTCGTTAT
GCACCCGCTCGTTATAACACTTGGGATCCATTCTTGGATAATGGTAAGTGGCGTGGGTTACAAGGACCTGGTGGTGCGAC
GCTCTTATTGCGCCACCACATAGACATTAACAACTACTTTATTGTTGGAGGTGCTTATCTCAACATTGGTAACCCTAACA
TGAACTTAGGAACTTGGGGTAACCCTGTGGCTATTGATGGTATCGAACAATGGGTCGGTGGTATCTATAGCTTAGGTTTT
GCAGGGATTGACAACATTACCGATGCGGACGCATTCACCGAGTATGTTAAAGGTGGGGGCAAGCATGGTAAGTTTAGTTG
GAGCGTTTATCAGCGCTTCACGACCGCACCAAGGGCTTTGGAATATGGTATTGGTATGTATTTAGACTATCAGTTTAGCA
AACGCATCAAAGCAGGTCTCAAACTCGTATGGTTAACTTTCCAAATCCGTGCAGGCTACAACCCTGGGACCGGTTTCCTT
GGGCCAAATGGTCAGCCGCTCAACTTGAATAATGGTTTGTTTGAGTCTTCAGCGTTCGCACAAGGTCCTCAAAACATGGG
TGGTATTGCAAAAAGCATTACCCAGGATAGAAGCCATTTGATGACGCATATCAGTTATAGTTTCTAA

Upstream 100 bases:

>100_bases
AAGAAAAATTAGCTTGATTTTTAGCTAATTCTATGTTCTTTTATGCTAAAATCTTTTTTACAGAGTAATTTATCTGATTA
GGTAAAGTAAGGAAAAAGGA

Downstream 100 bases:

>100_bases
GAGGGTTCTCTATCCCTTAGATATGATTTTTGTATTTTTTGGTTTAGTATCTTTAGGAGTAGGGCTTTGAAAAACAAAAA
GTATTTTTCTTACTCCTTCT

Product: hof family outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outermembrane Protein HofE; Outer Membrane Protein HofF; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MKLKKRKVATALLKRLTLPLLFTTGSLGAITYEVHGDFINFSKVGFNHSPINPVKGIYPTETFVNLTGKIEGSVHLGKGW
SVNLGGVLGGQVYDSTRYDRWAKDFTPPSYWDKTSCGTDSMSLCMNATKMWEQQGPGGIIDPRGIGYMYMGEWNGLFPNY
YPANAYLPGHSRRYEVYKANLTYDSSRVHMVMGRFDVTEQEQMDWIYQLFQGFYGTFKLTKNMKFLLFSSWGRGIADGQW
LFPIYREKPWGIHKAGIIYRPTKNLLIHPYVYLIPEVGTLPGVKIEYDTNPDFRGIGIRNKTTFYGLYDYRWNNAEYGRY
APARYNTWDPFLDNGKWRGLQGPGGATLLLRHHIDINNYFIVGGAYLNIGNPNMNLGTWGNPVAIDGIEQWVGGIYSLGF
AGIDNITDADAFTEYVKGGGKHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKRIKAGLKLVWLTFQIRAGYNPGTGFL
GPNGQPLNLNNGLFESSAFAQGPQNMGGIAKSITQDRSHLMTHISYSF

Sequences:

>Translated_528_residues
MKLKKRKVATALLKRLTLPLLFTTGSLGAITYEVHGDFINFSKVGFNHSPINPVKGIYPTETFVNLTGKIEGSVHLGKGW
SVNLGGVLGGQVYDSTRYDRWAKDFTPPSYWDKTSCGTDSMSLCMNATKMWEQQGPGGIIDPRGIGYMYMGEWNGLFPNY
YPANAYLPGHSRRYEVYKANLTYDSSRVHMVMGRFDVTEQEQMDWIYQLFQGFYGTFKLTKNMKFLLFSSWGRGIADGQW
LFPIYREKPWGIHKAGIIYRPTKNLLIHPYVYLIPEVGTLPGVKIEYDTNPDFRGIGIRNKTTFYGLYDYRWNNAEYGRY
APARYNTWDPFLDNGKWRGLQGPGGATLLLRHHIDINNYFIVGGAYLNIGNPNMNLGTWGNPVAIDGIEQWVGGIYSLGF
AGIDNITDADAFTEYVKGGGKHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKRIKAGLKLVWLTFQIRAGYNPGTGFL
GPNGQPLNLNNGLFESSAFAQGPQNMGGIAKSITQDRSHLMTHISYSF
>Mature_528_residues
MKLKKRKVATALLKRLTLPLLFTTGSLGAITYEVHGDFINFSKVGFNHSPINPVKGIYPTETFVNLTGKIEGSVHLGKGW
SVNLGGVLGGQVYDSTRYDRWAKDFTPPSYWDKTSCGTDSMSLCMNATKMWEQQGPGGIIDPRGIGYMYMGEWNGLFPNY
YPANAYLPGHSRRYEVYKANLTYDSSRVHMVMGRFDVTEQEQMDWIYQLFQGFYGTFKLTKNMKFLLFSSWGRGIADGQW
LFPIYREKPWGIHKAGIIYRPTKNLLIHPYVYLIPEVGTLPGVKIEYDTNPDFRGIGIRNKTTFYGLYDYRWNNAEYGRY
APARYNTWDPFLDNGKWRGLQGPGGATLLLRHHIDINNYFIVGGAYLNIGNPNMNLGTWGNPVAIDGIEQWVGGIYSLGF
AGIDNITDADAFTEYVKGGGKHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKRIKAGLKLVWLTFQIRAGYNPGTGFL
GPNGQPLNLNNGLFESSAFAQGPQNMGGIAKSITQDRSHLMTHISYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59601; Mature: 59601

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKRKVATALLKRLTLPLLFTTGSLGAITYEVHGDFINFSKVGFNHSPINPVKGIYPT
CCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCC
ETFVNLTGKIEGSVHLGKGWSVNLGGVLGGQVYDSTRYDRWAKDFTPPSYWDKTSCGTDS
CEEEEEEEEEECEEEECCCCEEEECCEECCCEECCCCHHHHHHCCCCCCCCCCCCCCCCH
MSLCMNATKMWEQQGPGGIIDPRGIGYMYMGEWNGLFPNYYPANAYLPGHSRRYEVYKAN
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
LTYDSSRVHMVMGRFDVTEQEQMDWIYQLFQGFYGTFKLTKNMKFLLFSSWGRGIADGQW
EEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCCCCEE
LFPIYREKPWGIHKAGIIYRPTKNLLIHPYVYLIPEVGTLPGVKIEYDTNPDFRGIGIRN
EEEEECCCCCCEECCCEEECCCCCCEECCEEEEECCCCCCCCEEEEECCCCCEEEECCCC
KTTFYGLYDYRWNNAEYGRYAPARYNTWDPFLDNGKWRGLQGPGGATLLLRHHIDINNYF
CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCEE
IVGGAYLNIGNPNMNLGTWGNPVAIDGIEQWVGGIYSLGFAGIDNITDADAFTEYVKGGG
EEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
KHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKRIKAGLKLVWLTFQIRAGYNPGTGFL
CCCCEEHHHHHHHHCCCHHHHHCCCEEEEHHHHHHHHCCEEEEEEEEEEEECCCCCCCCC
GPNGQPLNLNNGLFESSAFAQGPQNMGGIAKSITQDRSHLMTHISYSF
CCCCCEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLKKRKVATALLKRLTLPLLFTTGSLGAITYEVHGDFINFSKVGFNHSPINPVKGIYPT
CCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCC
ETFVNLTGKIEGSVHLGKGWSVNLGGVLGGQVYDSTRYDRWAKDFTPPSYWDKTSCGTDS
CEEEEEEEEEECEEEECCCCEEEECCEECCCEECCCCHHHHHHCCCCCCCCCCCCCCCCH
MSLCMNATKMWEQQGPGGIIDPRGIGYMYMGEWNGLFPNYYPANAYLPGHSRRYEVYKAN
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
LTYDSSRVHMVMGRFDVTEQEQMDWIYQLFQGFYGTFKLTKNMKFLLFSSWGRGIADGQW
EEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCCCCEE
LFPIYREKPWGIHKAGIIYRPTKNLLIHPYVYLIPEVGTLPGVKIEYDTNPDFRGIGIRN
EEEEECCCCCCEECCCEEECCCCCCEECCEEEEECCCCCCCCEEEEECCCCCEEEECCCC
KTTFYGLYDYRWNNAEYGRYAPARYNTWDPFLDNGKWRGLQGPGGATLLLRHHIDINNYF
CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCEE
IVGGAYLNIGNPNMNLGTWGNPVAIDGIEQWVGGIYSLGFAGIDNITDADAFTEYVKGGG
EEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
KHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKRIKAGLKLVWLTFQIRAGYNPGTGFL
CCCCEEHHHHHHHHCCCHHHHHCCCEEEEHHHHHHHHCCEEEEEEEEEEEECCCCCCCCC
GPNGQPLNLNNGLFESSAFAQGPQNMGGIAKSITQDRSHLMTHISYSF
CCCCCEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA