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The map label for this gene is serC

Identifier: 109947258

GI number: 109947258

Start: 598617

End: 599726

Strand: Direct

Name: serC

Synonym: Hac_0683

Alternate gene names: NA

Gene position: 598617-599726 (Clockwise)

Preceding gene: 109947251

Following gene: 109947259

Centisome position: 38.52

GC content: 40.0

Gene sequence:

>1110_bases
ATGTTGCTTTTTACTCCAGGCCCTGTAGCGATTAGTGAAGAAATGCGCACAAGCTTTTCTCAGCAAATGCCCCACCACCG
CACCAAAGATTTTGAAAAGATTTTTCAAAGCGTGCGAGAAAATTTAAAAAAAATGACAGGTTTAGAAGAAGTTTTGCTTT
TAAATAGCAGTGGGACAGGGGCTATGGAAGCGAGCATTCTTTCATTGTGTCAAAAGGGATTGCTGTTTGTTAATGCGGGT
AAATTTGGCGAAAGGTTTGGCAAGATCGCTAAAGCCCATTCACTCAAAGCTCGCGAATTGGTCTATGAGTGGGACACGCC
CGCTAAAGTAGATGAAATATTAAACACGCTTAAAGCTAACCCTAACATTGATGCGTTTTGCATTCAAGCATGCGAGTCTA
GTGGGGGGTTAAGACACCCTGTAGAAGAAATCGCTCAAGCGATCAAAGAAACCAATAAAGATATTTTTGTGATCGTAGAT
GCCATCACCGCTTTAGGGGTTGAACCTTTAGAAATAAAACATATAGATGCACTCATTGGAGGGAGTCAAAAGGCGTTCAT
GCTGCCTCCTGCGATGAGCTTGATTGCGTTGAGTCAAAAAGCAATTGATCGTATAGAAGAACGCAATATAGGGTTTTATT
TCAACTTAAAGAGCGAATTGAAAAACCAAAAAAATAACACCACAAGCTACACCGCTCCTATTTTACACACTTTAGGGTTG
CAACGCTATTTTGAATTAGTGCAAAATTTGGGGGGCTTTGAAGCACTCTATAAAGAGACTAAAAGAGTCGCTCTAGCCAC
TCAAAAAGCGGTTTTAGCATTAGGTTTAAAGATCTTCCCTAAAAGCCCAAGTTTGAGCATGACAACGATTTTTAACGAGC
ATGCCAAAGAATTGCGAACTCTTTTAAAAGAAAAATACCAGGTGCAATTTGCGGGTGGGCAAGAGCCTTATAAAGATGCA
CTCATTCGCATCAATCACATGGGAATCATTCCTGTTTACCAAAGCGCTTACGCCTTAAATACCCTAGAATTAGCCCTAAA
CGATTTGAATTTAAGGGAATTTGATGGCGTAGCGAACACAACCTTTTTAAAGCAATATTATGAAATTTAA

Upstream 100 bases:

>100_bases
CAATTAAAAAGCGATTCTTTAAACAATAAGGCTTAATTTAAGCACGCTTTTAGTATGATCGCTTTTAAATTCTCTTTAGA
AACTAAAGGTTAATTTTAAA

Downstream 100 bases:

>100_bases
GGATCACAATGCATTATTCTTATGAAACCTTTTTAAAAGACAGCCTAAAATTAGTGGAACAAGTAGAACAAATTTGCGGT
ATCCCAGAAGCCCTTGTGTG

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MLLFTPGPVAISEEMRTSFSQQMPHHRTKDFEKIFQSVRENLKKMTGLEEVLLLNSSGTGAMEASILSLCQKGLLFVNAG
KFGERFGKIAKAHSLKARELVYEWDTPAKVDEILNTLKANPNIDAFCIQACESSGGLRHPVEEIAQAIKETNKDIFVIVD
AITALGVEPLEIKHIDALIGGSQKAFMLPPAMSLIALSQKAIDRIEERNIGFYFNLKSELKNQKNNTTSYTAPILHTLGL
QRYFELVQNLGGFEALYKETKRVALATQKAVLALGLKIFPKSPSLSMTTIFNEHAKELRTLLKEKYQVQFAGGQEPYKDA
LIRINHMGIIPVYQSAYALNTLELALNDLNLREFDGVANTTFLKQYYEI

Sequences:

>Translated_369_residues
MLLFTPGPVAISEEMRTSFSQQMPHHRTKDFEKIFQSVRENLKKMTGLEEVLLLNSSGTGAMEASILSLCQKGLLFVNAG
KFGERFGKIAKAHSLKARELVYEWDTPAKVDEILNTLKANPNIDAFCIQACESSGGLRHPVEEIAQAIKETNKDIFVIVD
AITALGVEPLEIKHIDALIGGSQKAFMLPPAMSLIALSQKAIDRIEERNIGFYFNLKSELKNQKNNTTSYTAPILHTLGL
QRYFELVQNLGGFEALYKETKRVALATQKAVLALGLKIFPKSPSLSMTTIFNEHAKELRTLLKEKYQVQFAGGQEPYKDA
LIRINHMGIIPVYQSAYALNTLELALNDLNLREFDGVANTTFLKQYYEI
>Mature_369_residues
MLLFTPGPVAISEEMRTSFSQQMPHHRTKDFEKIFQSVRENLKKMTGLEEVLLLNSSGTGAMEASILSLCQKGLLFVNAG
KFGERFGKIAKAHSLKARELVYEWDTPAKVDEILNTLKANPNIDAFCIQACESSGGLRHPVEEIAQAIKETNKDIFVIVD
AITALGVEPLEIKHIDALIGGSQKAFMLPPAMSLIALSQKAIDRIEERNIGFYFNLKSELKNQKNNTTSYTAPILHTLGL
QRYFELVQNLGGFEALYKETKRVALATQKAVLALGLKIFPKSPSLSMTTIFNEHAKELRTLLKEKYQVQFAGGQEPYKDA
LIRINHMGIIPVYQSAYALNTLELALNDLNLREFDGVANTTFLKQYYEI

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=346, Percent_Identity=23.9884393063584, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17536281, Length=288, Percent_Identity=25, Blast_Score=82, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6321079, Length=381, Percent_Identity=23.8845144356955, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI17530823, Length=346, Percent_Identity=22.8323699421965, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 41288; Mature: 41288

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLFTPGPVAISEEMRTSFSQQMPHHRTKDFEKIFQSVRENLKKMTGLEEVLLLNSSGTG
CEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCC
AMEASILSLCQKGLLFVNAGKFGERFGKIAKAHSLKARELVYEWDTPAKVDEILNTLKAN
HHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHHHHCCC
PNIDAFCIQACESSGGLRHPVEEIAQAIKETNKDIFVIVDAITALGVEPLEIKHIDALIG
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHC
GSQKAFMLPPAMSLIALSQKAIDRIEERNIGFYFNLKSELKNQKNNTTSYTAPILHTLGL
CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHH
QRYFELVQNLGGFEALYKETKRVALATQKAVLALGLKIFPKSPSLSMTTIFNEHAKELRT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHH
LLKEKYQVQFAGGQEPYKDALIRINHMGIIPVYQSAYALNTLELALNDLNLREFDGVANT
HHHHHHEEEECCCCCHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH
TFLKQYYEI
HHHHHHHCC
>Mature Secondary Structure
MLLFTPGPVAISEEMRTSFSQQMPHHRTKDFEKIFQSVRENLKKMTGLEEVLLLNSSGTG
CEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCC
AMEASILSLCQKGLLFVNAGKFGERFGKIAKAHSLKARELVYEWDTPAKVDEILNTLKAN
HHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHHHHCCC
PNIDAFCIQACESSGGLRHPVEEIAQAIKETNKDIFVIVDAITALGVEPLEIKHIDALIG
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHC
GSQKAFMLPPAMSLIALSQKAIDRIEERNIGFYFNLKSELKNQKNNTTSYTAPILHTLGL
CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHH
QRYFELVQNLGGFEALYKETKRVALATQKAVLALGLKIFPKSPSLSMTTIFNEHAKELRT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHH
LLKEKYQVQFAGGQEPYKDALIRINHMGIIPVYQSAYALNTLELALNDLNLREFDGVANT
HHHHHHEEEECCCCCHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH
TFLKQYYEI
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]