| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947232
Identifier: 109947232
GI number: 109947232
Start: 574761
End: 575402
Strand: Direct
Name: 109947232
Synonym: Hac_0655
Alternate gene names: NA
Gene position: 574761-575402 (Clockwise)
Preceding gene: 109947229
Following gene: 109947233
Centisome position: 36.99
GC content: 35.51
Gene sequence:
>642_bases TTGAAAAAGGTTCAAGTAGCTAGAGTTATTAGAGATAAACTAGCTTGCAAGCTTTTGTTTTTGAAACTCAAAGATTATCA AAATATTTTATTGTATAGCCCATTGGGGCATGAGCTTGATATAAGGTCTTTAATTTTTAAGTTAAGACAAAAAAATAAGC GTGTGTGGTTGCCTAAAAGCATCAAAAAGGGTAGTGGTTTTTCTAAAGAGGGTTTTAGTATTGTGCCCTTTAGGTTGCCC TTAAAGCGTTTAGGGTGGTTTGATGAGCCTAATATATCGCACTACTATAAGCAAGAATTAGATTGCATTGTAGTGCCGAT TTTAGGAATGGATACAAGTTTTAGGCGCGTGGGTTTTGGGCTGGGCATGTATGATAAAAGCTTGCCCAAATTACTCAAAA AGCCATTAAAGCACCCCTTAATCATATTTGTGAGCAGGGAGTTAGCGCTAGCCAGTAACAATCTTACAAACGCTTATGAC ATTGAAGCAAATCTTTACATGAATGCTCGTATCGTTATGAAGAATAATAAAAGGAAATATTATGGGCAACGGGTTAATTT ACATTTCATTAGAAGTCATTGTAGCGTGTTTGATCAGTGCTCTAGCAATGTATTATGTGATGAAAAAGATCTATTATGCT AG
Upstream 100 bases:
>100_bases AAAATGGTAACTAGTAACCTAAAATTATACTATAATGTAAGTCTAAAATTTAAGGATTATAACCATTAAAACGATTTTTA GAGATTTTTGTAAAGAACGC
Downstream 100 bases:
>100_bases AGGGCAAGCCGTTTTAAAAAGTGCTTCAGCTAAAGCTAAATTGATGGAATTTCAAGCAAAATCTTTTGTGGAAGCCGAAG AGATGCGCATGAAAAGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: 5 10-Methenyltetrahydrofolate Synthetase
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKKVQVARVIRDKLACKLLFLKLKDYQNILLYSPLGHELDIRSLIFKLRQKNKRVWLPKSIKKGSGFSKEGFSIVPFRLP LKRLGWFDEPNISHYYKQELDCIVVPILGMDTSFRRVGFGLGMYDKSLPKLLKKPLKHPLIIFVSRELALASNNLTNAYD IEANLYMNARIVMKNNKRKYYGQRVNLHFIRSHCSVFDQCSSNVLCDEKDLLC
Sequences:
>Translated_213_residues MKKVQVARVIRDKLACKLLFLKLKDYQNILLYSPLGHELDIRSLIFKLRQKNKRVWLPKSIKKGSGFSKEGFSIVPFRLP LKRLGWFDEPNISHYYKQELDCIVVPILGMDTSFRRVGFGLGMYDKSLPKLLKKPLKHPLIIFVSRELALASNNLTNAYD IEANLYMNARIVMKNNKRKYYGQRVNLHFIRSHCSVFDQCSSNVLCDEKDLLC >Mature_213_residues MKKVQVARVIRDKLACKLLFLKLKDYQNILLYSPLGHELDIRSLIFKLRQKNKRVWLPKSIKKGSGFSKEGFSIVPFRLP LKRLGWFDEPNISHYYKQELDCIVVPILGMDTSFRRVGFGLGMYDKSLPKLLKKPLKHPLIIFVSRELALASNNLTNAYD IEANLYMNARIVMKNNKRKYYGQRVNLHFIRSHCSVFDQCSSNVLCDEKDLLC
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24841; Mature: 24841
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVQVARVIRDKLACKLLFLKLKDYQNILLYSPLGHELDIRSLIFKLRQKNKRVWLPKS CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEECCCC IKKGSGFSKEGFSIVPFRLPLKRLGWFDEPNISHYYKQELDCIVVPILGMDTSFRRVGFG CCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHCC LGMYDKSLPKLLKKPLKHPLIIFVSRELALASNNLTNAYDIEANLYMNARIVMKNNKRKY CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCEEEEEEEEEEEEEEEEECCCCEE YGQRVNLHFIRSHCSVFDQCSSNVLCDEKDLLC CCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKKVQVARVIRDKLACKLLFLKLKDYQNILLYSPLGHELDIRSLIFKLRQKNKRVWLPKS CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEECCCC IKKGSGFSKEGFSIVPFRLPLKRLGWFDEPNISHYYKQELDCIVVPILGMDTSFRRVGFG CCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHCC LGMYDKSLPKLLKKPLKHPLIIFVSRELALASNNLTNAYDIEANLYMNARIVMKNNKRKY CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCEEEEEEEEEEEEEEEEECCCCEE YGQRVNLHFIRSHCSVFDQCSSNVLCDEKDLLC CCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA