Click here to switch to the map view.

The map label for this gene is fragment 3

Identifier: 109947209

GI number: 109947209

Start: 551739

End: 552182

Strand: Direct

Name: fragment 3

Synonym: Hac_0630

Alternate gene names: NA

Gene position: 551739-552182 (Clockwise)

Preceding gene: 109947208

Following gene: 109947213

Centisome position: 35.51

GC content: 38.29

Gene sequence:

>444_bases
GTGGATTTAGTCAGCACTGAACCTGATAGTTATGGTGGAGTGTGGGATACATTCACTGGCATTACTTTTTCAGTGCCTGC
ACAATTACCCCAATCTCTCACACGATTAAAAGACAAGGTTTATACCTTTTTCAAAAAACAACCTGATAGTGGTTATGGCA
TAAATTTCAGTGAAATCGCTAAAACGCAAATCAAAGTAGCTGTCTTACCTATTGAGAGACTAGGCAAACCCTTTGAAAGC
TATATTGTAGGCTCTATCAAAGGGAGTCAGAGTATGGCTCGTGCGTATGGATACCCTAAAGTTTTTACCATTGATGAGGT
AAGTGAATGGGAAAAAGAAACCATGAAAAGCCGAGACTATGAGAGACGGAATTTGAGTAAGAATTATAGATTGAGCGTGA
AACAAAATCTTGAAATCATTAAAATCTCTAACGCTCTGGCATAA

Upstream 100 bases:

>100_bases
ACCTAGTGATACCTTTAATTTAAAAAGACCTTATTAGTGTTAGCTAGAGTGTTTAGTCAAGCGGCTATTTGTTATTGCCA
AAAACGCAAGCACTAATGAA

Downstream 100 bases:

>100_bases
GGTGAGAGAGTGAGTGATAGTCTTATTGCTAGCATGTTAAGTAATGCTGATAAACCTAACAACGAGTAGAGAGTTTAACC
CTTATTTCTGTGTTGATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDLVSTEPDSYGGVWDTFTGITFSVPAQLPQSLTRLKDKVYTFFKKQPDSGYGINFSEIAKTQIKVAVLPIERLGKPFES
YIVGSIKGSQSMARAYGYPKVFTIDEVSEWEKETMKSRDYERRNLSKNYRLSVKQNLEIIKISNALA

Sequences:

>Translated_147_residues
MDLVSTEPDSYGGVWDTFTGITFSVPAQLPQSLTRLKDKVYTFFKKQPDSGYGINFSEIAKTQIKVAVLPIERLGKPFES
YIVGSIKGSQSMARAYGYPKVFTIDEVSEWEKETMKSRDYERRNLSKNYRLSVKQNLEIIKISNALA
>Mature_147_residues
MDLVSTEPDSYGGVWDTFTGITFSVPAQLPQSLTRLKDKVYTFFKKQPDSGYGINFSEIAKTQIKVAVLPIERLGKPFES
YIVGSIKGSQSMARAYGYPKVFTIDEVSEWEKETMKSRDYERRNLSKNYRLSVKQNLEIIKISNALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16718; Mature: 16718

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVSTEPDSYGGVWDTFTGITFSVPAQLPQSLTRLKDKVYTFFKKQPDSGYGINFSEIA
CCCCCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
KTQIKVAVLPIERLGKPFESYIVGSIKGSQSMARAYGYPKVFTIDEVSEWEKETMKSRDY
HHHEEEEEEEHHHHCCCHHHHEEECCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCH
ERRNLSKNYRLSVKQNLEIIKISNALA
HHHCCCCCEEEEECCCEEEEEECCCCC
>Mature Secondary Structure
MDLVSTEPDSYGGVWDTFTGITFSVPAQLPQSLTRLKDKVYTFFKKQPDSGYGINFSEIA
CCCCCCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
KTQIKVAVLPIERLGKPFESYIVGSIKGSQSMARAYGYPKVFTIDEVSEWEKETMKSRDY
HHHEEEEEEEHHHHCCCHHHHEEECCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCH
ERRNLSKNYRLSVKQNLEIIKISNALA
HHHCCCCCEEEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA