| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fragment 2
Identifier: 109947208
GI number: 109947208
Start: 551270
End: 551608
Strand: Direct
Name: fragment 2
Synonym: Hac_0629
Alternate gene names: NA
Gene position: 551270-551608 (Clockwise)
Preceding gene: 109947207
Following gene: 109947209
Centisome position: 35.48
GC content: 32.45
Gene sequence:
>339_bases TTGAAGTTTATAAAAGCGGTTATAAACATTAATGATATAGATGCCTATTATTTTGCTGACGCTTTTTTGAGAGATGATGA AACTATCTACGCTAAACTCTGTAAGGGGTTAGGAAAACCTTTTGTTAATAAAATTTTAAACCCTAATAGCACAGCGACAA TGAAAGATTTTATGTCCAGTAGGGAATTTGTTAAAAGATACCGCTACACAAACAAAGACAATACGAACAGAACAAGACAG CTAAAATCATTTTTAAACTTTAAGCGGAATTTTCTCGGTTATATTGAAGTGGTGGGGTATTGGAAAGAGAGCTTAAAAGA TGACCTTTTACCCAAATAA
Upstream 100 bases:
>100_bases TAAGATTAAAAGCGGATTACCCTTTGGGACTATCTCGGCGTTTAGATTTTTTAAACCTGAATGATTGCTGACTTTACTGA AGGTGAGCGAGAAAAACTGA
Downstream 100 bases:
>100_bases AGAAGTCAGCTTTTTTGTATTTCAAAACGAACCTAGTGATACCTTTAATTTAAAAAGACCTTATTAGTGTTAGCTAGAGT GTTTAGTCAAGCGGCTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKFIKAVININDIDAYYFADAFLRDDETIYAKLCKGLGKPFVNKILNPNSTATMKDFMSSREFVKRYRYTNKDNTNRTRQ LKSFLNFKRNFLGYIEVVGYWKESLKDDLLPK
Sequences:
>Translated_112_residues MKFIKAVININDIDAYYFADAFLRDDETIYAKLCKGLGKPFVNKILNPNSTATMKDFMSSREFVKRYRYTNKDNTNRTRQ LKSFLNFKRNFLGYIEVVGYWKESLKDDLLPK >Mature_112_residues MKFIKAVININDIDAYYFADAFLRDDETIYAKLCKGLGKPFVNKILNPNSTATMKDFMSSREFVKRYRYTNKDNTNRTRQ LKSFLNFKRNFLGYIEVVGYWKESLKDDLLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13284; Mature: 13284
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIKAVININDIDAYYFADAFLRDDETIYAKLCKGLGKPFVNKILNPNSTATMKDFMSS CHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH REFVKRYRYTNKDNTNRTRQLKSFLNFKRNFLGYIEVVGYWKESLKDDLLPK HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKFIKAVININDIDAYYFADAFLRDDETIYAKLCKGLGKPFVNKILNPNSTATMKDFMSS CHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH REFVKRYRYTNKDNTNRTRQLKSFLNFKRNFLGYIEVVGYWKESLKDDLLPK HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA