Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947155
Identifier: 109947155
GI number: 109947155
Start: 497080
End: 498075
Strand: Direct
Name: 109947155
Synonym: Hac_0565
Alternate gene names: NA
Gene position: 497080-498075 (Clockwise)
Preceding gene: 109947154
Following gene: 109947156
Centisome position: 31.99
GC content: 41.27
Gene sequence:
>996_bases ATGAAAAGATTTGTTTTGTTTTTATCACTCATGGGTGTTTGTGTTTGCGTTCAAGCTTACGCCGAGCAAGATTACTTTTT TAGGGATTTTAAATCTAGAGATTTGCCCCAAAAACTCCATCTTGATAAAAAGCTCTCCAAAAAAATCCAGCCATGTGCAC ATCTTAGTGCATTGCGACACTATACTCCCACTGGGGTTAGAGAGCCTGATGCATGCACAAAGAGCTTTAAAAAATCCGCT ACCATGTCCTATGACTTAGCGCTAGGCTATTTGGTGAGCCAAAACAAACAATACGGCTTAAAAGCTATAGAAATTTTAAA CGCTTGGGCTAAAGAGCTTCAGAGTGCAGATACGCACCAAAGCGAGGATAATATCAATTTCTACATGCCTTATATGAACA TGGCTTATTGGTTTGTTAAAAAGGTATTTCCTAGCCCAGAATATGAAGATTTCATTAAGCGGATGTGCCAGTATTCTCAA TCAGCTCTTAATACTAACCATGGGGCGTGGGGCATTCTCTTTGATATTAGCTCTGCACTCGTGCTAGGCGATCATGCCCT TTTGCACAATAGCGCTAATCGGTGGCAGGAGTGGATATTTAAAGCCATAGATGAGAATGGGGTTATTGCTAGTGCGATCA CTAGGAGCGATACGAGCGATTATCATGGGGGCCCTACAAAGGGCATTAAGGGGATAGCTTATACCAATTTCGCGCTTCTT GCGCTAACTATATCAGGCGAATTGCTTTTTGAGAATGGGTATGATTTGTGGGGTAGTGGAGCCGGACAAAGGCTCTCTAT AGCGTATGATAAAGTTGCAACATGGATTTTAAATCCTGAAACTTTCCCTTATTTCCAGCCTAATCTCATTGGGGTGCATA ACAACGCTTATTTCATTATTTTAGCCAAGCATTATTCTAGCCCTAGTGCGGATGAGCTTTTAAAACAAGGCGATTTGCAT GAAGATGGTTTTAGGCTCAAACTCCGATCGTTTTAA
Upstream 100 bases:
>100_bases CGGTTAGCGCCTTAAACACGCATGCACTTAAATTTGTGTTGTTGGAAGCGTTACCATAAAACGCTATTCTTAAACCAATC CATTCAAATAAAGGCGAGAA
Downstream 100 bases:
>100_bases AATTTTAACTTACTTTGTCAAAAATAGTTTGTCTTTAAGCAAACCTTAAGCTTTCTATGACTATAATTTCATTTCCTTGT TTCAGCAAGGGCTTTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKRFVLFLSLMGVCVCVQAYAEQDYFFRDFKSRDLPQKLHLDKKLSKKIQPCAHLSALRHYTPTGVREPDACTKSFKKSA TMSYDLALGYLVSQNKQYGLKAIEILNAWAKELQSADTHQSEDNINFYMPYMNMAYWFVKKVFPSPEYEDFIKRMCQYSQ SALNTNHGAWGILFDISSALVLGDHALLHNSANRWQEWIFKAIDENGVIASAITRSDTSDYHGGPTKGIKGIAYTNFALL ALTISGELLFENGYDLWGSGAGQRLSIAYDKVATWILNPETFPYFQPNLIGVHNNAYFIILAKHYSSPSADELLKQGDLH EDGFRLKLRSF
Sequences:
>Translated_331_residues MKRFVLFLSLMGVCVCVQAYAEQDYFFRDFKSRDLPQKLHLDKKLSKKIQPCAHLSALRHYTPTGVREPDACTKSFKKSA TMSYDLALGYLVSQNKQYGLKAIEILNAWAKELQSADTHQSEDNINFYMPYMNMAYWFVKKVFPSPEYEDFIKRMCQYSQ SALNTNHGAWGILFDISSALVLGDHALLHNSANRWQEWIFKAIDENGVIASAITRSDTSDYHGGPTKGIKGIAYTNFALL ALTISGELLFENGYDLWGSGAGQRLSIAYDKVATWILNPETFPYFQPNLIGVHNNAYFIILAKHYSSPSADELLKQGDLH EDGFRLKLRSF >Mature_331_residues MKRFVLFLSLMGVCVCVQAYAEQDYFFRDFKSRDLPQKLHLDKKLSKKIQPCAHLSALRHYTPTGVREPDACTKSFKKSA TMSYDLALGYLVSQNKQYGLKAIEILNAWAKELQSADTHQSEDNINFYMPYMNMAYWFVKKVFPSPEYEDFIKRMCQYSQ SALNTNHGAWGILFDISSALVLGDHALLHNSANRWQEWIFKAIDENGVIASAITRSDTSDYHGGPTKGIKGIAYTNFALL ALTISGELLFENGYDLWGSGAGQRLSIAYDKVATWILNPETFPYFQPNLIGVHNNAYFIILAKHYSSPSADELLKQGDLH EDGFRLKLRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37637; Mature: 37637
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFVLFLSLMGVCVCVQAYAEQDYFFRDFKSRDLPQKLHLDKKLSKKIQPCAHLSALRH CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH YTPTGVREPDACTKSFKKSATMSYDLALGYLVSQNKQYGLKAIEILNAWAKELQSADTHQ CCCCCCCCCHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC SEDNINFYMPYMNMAYWFVKKVFPSPEYEDFIKRMCQYSQSALNTNHGAWGILFDISSAL CCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH VLGDHALLHNSANRWQEWIFKAIDENGVIASAITRSDTSDYHGGPTKGIKGIAYTNFALL HHCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCEEEE ALTISGELLFENGYDLWGSGAGQRLSIAYDKVATWILNPETFPYFQPNLIGVHNNAYFII EEEECCEEEEECCCCCCCCCCCCEEEEEHHHHHHEEECCCCCCCCCCCEEEEECCEEEEE LAKHYSSPSADELLKQGDLHEDGFRLKLRSF EEECCCCCCHHHHHHCCCCCCCCCEEEEECC >Mature Secondary Structure MKRFVLFLSLMGVCVCVQAYAEQDYFFRDFKSRDLPQKLHLDKKLSKKIQPCAHLSALRH CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH YTPTGVREPDACTKSFKKSATMSYDLALGYLVSQNKQYGLKAIEILNAWAKELQSADTHQ CCCCCCCCCHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC SEDNINFYMPYMNMAYWFVKKVFPSPEYEDFIKRMCQYSQSALNTNHGAWGILFDISSAL CCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH VLGDHALLHNSANRWQEWIFKAIDENGVIASAITRSDTSDYHGGPTKGIKGIAYTNFALL HHCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCEEEE ALTISGELLFENGYDLWGSGAGQRLSIAYDKVATWILNPETFPYFQPNLIGVHNNAYFII EEEECCEEEEECCCCCCCCCCCCEEEEEHHHHHHEEECCCCCCCCCCCEEEEECCEEEEE LAKHYSSPSADELLKQGDLHEDGFRLKLRSF EEECCCCCCHHHHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA