Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947138
Identifier: 109947138
GI number: 109947138
Start: 472075
End: 472593
Strand: Direct
Name: 109947138
Synonym: Hac_0547
Alternate gene names: NA
Gene position: 472075-472593 (Clockwise)
Preceding gene: 109947137
Following gene: 109947139
Centisome position: 30.38
GC content: 34.68
Gene sequence:
>519_bases ATGCGTTTTTTTAGTGGTTTTGGGTTTGTTAATGAAAGCGTGTTGTTTGAAGAGTGGCTTTTAAAAGGGGCTTATGATGT GTCAGGCTTTTCTATGGGGGCTATTAAGGCGATAGAATACGCCTATAATGAAGTCTTACAACAACGACGCATCAATTCCT TATTATTGTTTTCGCCTTGCATGTTGGCCCATAAGAGTTTGGCGTTCAAACGATTGCAACTTTATTCTTTTCAAAAAGAC CCACAAAGCTACATGGATAACTTTTATCAAGCAGTGGGTTTGGACGCTCAATTAGAGCGTTTTAAAAAAATGGGTTCTTT AGAAGAATTGGAATTTTTATTGAATTACAAGTATAGTGATCATACAATTAGGCTTTTATTAGAAAAAGGCGTGAAAATTG AAGTGTTTATCGGTTTAAAAGACAAAATTACTGATATTCAAGCTTTGTTGGAATTTTTCATGCCTTTAGCCCAAGTGTGG CAGTTTAAAAGCTATAACCATTTGTTGCAAAAATCTTAA
Upstream 100 bases:
>100_bases AAAACCACAAATAACGACTTGCAAGCGATTGAGCGCTCTGTTGTTAGAGCAAGAATATTTAGAGTATTCTAATTTGTATG ATTTATTGAATGGGTGAAAA
Downstream 100 bases:
>100_bases AAAAGGTGGAAGATGAAAAAGATTAGTTTAAAAATCAGTTTAGGGGTGTATTTGCTTCTTTTAGGCATTTTGGGTGGCTC TTTGATCATTTTAGGAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPCMLAHKSLAFKRLQLYSFQKD PQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSDHTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVW QFKSYNHLLQKS
Sequences:
>Translated_172_residues MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPCMLAHKSLAFKRLQLYSFQKD PQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSDHTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVW QFKSYNHLLQKS >Mature_172_residues MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPCMLAHKSLAFKRLQLYSFQKD PQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSDHTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVW QFKSYNHLLQKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20187; Mature: 20187
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPC CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAHKSLAFKRLQLYSFQKDPQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCC HTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVWQFKSYNHLLQKS HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPC CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAHKSLAFKRLQLYSFQKDPQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCC HTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVWQFKSYNHLLQKS HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA