Click here to switch to the map view.

The map label for this gene is 109947139

Identifier: 109947139

GI number: 109947139

Start: 472606

End: 473091

Strand: Direct

Name: 109947139

Synonym: Hac_0548

Alternate gene names: NA

Gene position: 472606-473091 (Clockwise)

Preceding gene: 109947138

Following gene: 109947140

Centisome position: 30.41

GC content: 38.27

Gene sequence:

>486_bases
ATGAAAAAGATTAGTTTAAAAATCAGTTTAGGGGTGTATTTGCTTCTTTTAGGCATTTTGGGTGGCTCTTTGATCATTTT
AGGAGCGATAGTCGCACCGATTGTTTTCAAAGCTTCAAGCATTTTGCCTGAATTGAATCTAACTTCATTTGAAAGCGGGA
AACTCATGGCACAAATCTTTGTGCGTTTCAATTATCTTTTGGGCGCGGTGGGGTTTATAGTGTTACTTTATGAAATCATT
TCATTTATTTACTCTAAAAGATCGTTTGCGTGTTTGATCTTTGGCGTGGCGATAGGGGTGTTGTGCTTGCTCTTTGTTTT
TTATTACACGCCTTATATTTTGAACGCTCAAAAAATAGGCGAAGCTGCAATCCAAAGCGATGCATTTGCTCGCTTGCACA
CTCAAAGCGAATGGCTGTTTAAGGAATTGTTTGTGTTGGTGTGCACTTTGTTTTTTTGGCACTTGTTTGGAAAAAACGCG
GTTTAA

Upstream 100 bases:

>100_bases
TGATATTCAAGCTTTGTTGGAATTTTTCATGCCTTTAGCCCAAGTGTGGCAGTTTAAAAGCTATAACCATTTGTTGCAAA
AATCTTAAAAAAGGTGGAAG

Downstream 100 bases:

>100_bases
TCAAATGAGGGAATTTTTGGATATATATTTGGCAAATATCTAGCAAAGAGAAGGTAGCATTTAATGAAAAGGTTTAAAAA
GAAACCAAAAAATACAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane Protein OxaA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKKISLKISLGVYLLLLGILGGSLIILGAIVAPIVFKASSILPELNLTSFESGKLMAQIFVRFNYLLGAVGFIVLLYEII
SFIYSKRSFACLIFGVAIGVLCLLFVFYYTPYILNAQKIGEAAIQSDAFARLHTQSEWLFKELFVLVCTLFFWHLFGKNA
V

Sequences:

>Translated_161_residues
MKKISLKISLGVYLLLLGILGGSLIILGAIVAPIVFKASSILPELNLTSFESGKLMAQIFVRFNYLLGAVGFIVLLYEII
SFIYSKRSFACLIFGVAIGVLCLLFVFYYTPYILNAQKIGEAAIQSDAFARLHTQSEWLFKELFVLVCTLFFWHLFGKNA
V
>Mature_161_residues
MKKISLKISLGVYLLLLGILGGSLIILGAIVAPIVFKASSILPELNLTSFESGKLMAQIFVRFNYLLGAVGFIVLLYEII
SFIYSKRSFACLIFGVAIGVLCLLFVFYYTPYILNAQKIGEAAIQSDAFARLHTQSEWLFKELFVLVCTLFFWHLFGKNA
V

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17959; Mature: 17959

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISLKISLGVYLLLLGILGGSLIILGAIVAPIVFKASSILPELNLTSFESGKLMAQIF
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VRFNYLLGAVGFIVLLYEIISFIYSKRSFACLIFGVAIGVLCLLFVFYYTPYILNAQKIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAIQSDAFARLHTQSEWLFKELFVLVCTLFFWHLFGKNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKISLKISLGVYLLLLGILGGSLIILGAIVAPIVFKASSILPELNLTSFESGKLMAQIF
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VRFNYLLGAVGFIVLLYEIISFIYSKRSFACLIFGVAIGVLCLLFVFYYTPYILNAQKIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAIQSDAFARLHTQSEWLFKELFVLVCTLFFWHLFGKNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA